Closed Genome Sequence of Clostridium pasteurianum ATCC 6013

ABSTRACT We report here the closed genome of Clostridium pasteurianum ATCC 6013, a saccharolytic, nitrogen-fixing, and spore-forming Gram-positive obligate anaerobe. The organism is of biotechnological interest due to the production of solvents (butanol and 1,3-propanediol) but can be associated with food spoilage. The genome comprises a total of 4,351,223 bp.

[1]  P. Dürre,et al.  Complete Genome Sequence of the Solvent Producer Clostridium saccharoperbutylacetonicum Strain DSM 14923 , 2014, Genome Announcements.

[2]  P. Dürre,et al.  Complete Genome Sequence of the Solvent Producer Clostridium saccharobutylicum NCP262 (DSM 13864) , 2013, Genome Announcements.

[3]  Peter Williams,et al.  IMG: the integrated microbial genomes database and comparative analysis system , 2011, Nucleic Acids Res..

[4]  Y. Jang,et al.  Continuous butanol production with reduced byproducts formation from glycerol by a hyper producing mutant of Clostridium pasteurianum , 2011, Applied Microbiology and Biotechnology.

[5]  C. Francke,et al.  Clostridial spore germination versus bacilli: genome mining and current insights. , 2011, Food microbiology.

[6]  J. Churey,et al.  Thermoaciduric Clostridium pasteurianum spoilage of shelf-stable apple juice. , 2010, Journal of food protection.

[7]  I-Min A. Chen,et al.  IMG ER: a system for microbial genome annotation expert review and curation , 2009, Bioinform..

[8]  D. Ussery,et al.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes , 2007, Nucleic acids research.

[9]  Eleftherios T. Papoutsakis,et al.  A comparative genomic view of clostridial sporulation and physiology , 2005, Nature Reviews Microbiology.

[10]  Rolf Apweiler,et al.  InterProScan - an integration platform for the signature-recognition methods in InterPro , 2001, Bioinform..

[11]  George N. Bennett,et al.  Genome Sequence and Comparative Analysis of the Solvent-Producing Bacterium Clostridium acetobutylicum , 2001, Journal of bacteriology.

[12]  G. Gottschalk,et al.  Glycerol conversion to 1,3-propanediol by Clostridium pasteurianum: cloning and expression of the gene encoding 1,3-propanediol dehydrogenase. , 1997, FEMS microbiology letters.

[13]  S. Eddy,et al.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. , 1997, Nucleic acids research.

[14]  M. Young,et al.  Restriction endonucleases in Clostridium pasteurianum ATCC 6013 and C. thermohydrosulfuricum DSM 568. , 1988, Journal of general microbiology.

[15]  C. H. Spiegelberg.  Clostridium pasteurianum associated with spoilage of an acid canned fruit. , 1940 .

[16]  Kathryn F. Beal,et al.  The Staden package, 1998. , 2000, Methods in molecular biology.

[17]  Thomas Wetter,et al.  Genome Sequence Assembly Using Trace Signals and Additional Sequence Information , 1999, German Conference on Bioinformatics.

[18]  R. Roberts,et al.  Restriction enzymes and their isoschizomers. , 1992, Nucleic acids research.

[19]  Miriam L. Land,et al.  Trace: Tennessee Research and Creative Exchange Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification Recommended Citation Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification , 2022 .