Transcriptome profiling of induced susceptibility effects on soybean–soybean aphid (Hemiptera: Aphididae) interaction

[1]  Eun Woo Son,et al.  iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data , 2018, BMC Bioinformatics.

[2]  Renan Valieris,et al.  Bioconda: sustainable and comprehensive software distribution for the life sciences , 2018, Nature Methods.

[3]  Rob Patro,et al.  Salmon provides fast and bias-aware quantification of transcript expression , 2017, Nature Methods.

[4]  Måns Magnusson,et al.  MultiQC: summarize analysis results for multiple tools and samples in a single report , 2016, Bioinform..

[5]  A. Michel,et al.  Biology and Economics of Recommendations for Insecticide-Based Management of Soybean Aphid , 2016 .

[6]  M. O'Neal,et al.  An Induced Susceptibility Response in Soybean Promotes Avirulent Aphis glycines (Hemiptera: Aphididae) Populations on Resistant Soybean , 2015, Environmental entomology.

[7]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[8]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[9]  Wolfgang Huber,et al.  Love MI, Huber W, Anders S.. Moderated estimation of fold change and dispersion for RNA-Seq data with DESeq2. Genome Biol 15: 550 , 2014 .

[10]  J. Alt,et al.  Soybean aphid biotype 4 identified. , 2013 .

[11]  M. O'Neal,et al.  The Response of Natural Enemies to Selective Insecticides Applied to Soybean , 2012, Environmental entomology.

[12]  G. Hartman,et al.  Resistance and virulence in the soybean-Aphis glycines interaction , 2012, Euphytica.

[13]  H. Ohm,et al.  Obviation of Wheat Resistance to the Hessian Fly Through Systemic Induced Susceptibility , 2012, Journal of economic entomology.

[14]  Nicolas Desneux,et al.  Ecology and management of the soybean aphid in North America. , 2011, Annual review of entomology.

[15]  R. Denno,et al.  Insect Ecology: Species interactions , 2011 .

[16]  G. Hartman,et al.  A New Soybean Aphid (Hemiptera: Aphididae) Biotype Identified , 2010, Journal of economic entomology.

[17]  G. Hartman,et al.  Discovery of Soybean Aphid Biotypes , 2008 .

[18]  D. Onstad,et al.  Occurrence and Distribution of Aphis glycines on Soybeans in Illinois in 2000 and Its Potential Control , 2001 .

[19]  M. G. Koerkamp,et al.  Dynamics of gene expression revealed by comparison of serial analysis of gene expression transcript profiles from yeast grown on two different carbon sources. , 1999, Molecular biology of the cell.

[20]  R. Denno,et al.  Insect Ecology: Behavior, Populations and Communities , 1975 .