Mechanisms of tandem repeat instability in bacteria.
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[1] M. Inouye,et al. Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday. , 1966, Cold Spring Harbor symposia on quantitative biology.
[2] D. Mount. A mutant of Escherichia coli showing constitutive expression of the lysogenic induction and error-prone DNA repair pathways. , 1977, Proceedings of the National Academy of Sciences of the United States of America.
[3] B. Ames,et al. Revised methods for the Salmonella mutagenicity test. , 1983, Mutation research.
[4] G. Levinson,et al. High frequencies of short frameshifts in poly-CA/TG tandem repeats borne by bacteriophage M13 in Escherichia coli K-12 , 1987, Nucleic Acids Res..
[5] T. Meyer,et al. Genetic mechanisms and biological implications of phase variation in pathogenic neisseriae , 1989, Clinical Microbiology Reviews.
[6] M. Bichara,et al. Z-DNA-forming sequences are spontaneous deletion hot spots. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[7] J. Miller,et al. A set of lacZ mutations in Escherichia coli that allow rapid detection of each of the six base substitutions. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[8] E. Moxon,et al. The molecular mechanism of phase variation of H. influenzae lipopolysaccharide , 1989, Cell.
[9] J. Miller,et al. A set of lacZ mutations in Escherichia coli that allow rapid detection of specific frameshift mutations. , 1990, Genetics.
[10] R. Sinden,et al. Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli , 1991, Nature.
[11] D. Maskell,et al. Phase variation of lipopolysaccharide in Haemophilus influenzae. , 1991, Research in microbiology.
[12] R. Woodgate. Construction of a umuDC operon substitution mutation in Escherichia coli. , 1992, Mutation research.
[13] F. Mooi,et al. Phase variation of H. influenzae fimbriae: Transcriptional control of two divergent genes through a variable combined promoter region , 1993, Cell.
[14] K. McEntee,et al. Involvement of Escherichia coli DNA polymerase II in response to oxidative damage and adaptive mutation , 1994, Journal of bacteriology.
[15] D. Leach. Long DNA palindromes, cruciform structures, genetic instability and secondary structure repair , 1994, BioEssays : news and reviews in molecular, cellular and developmental biology.
[16] S. Kowalczykowski,et al. Biochemistry of homologous recombination in Escherichia coli. , 1994, Microbiological reviews.
[17] E. Eichler,et al. Anomalous rapid electrophoretic mobility of DNA containing triplet repeats associated with human disease genes. , 1995, Biochemistry.
[18] Keiichi Ohshima,et al. Expansion and deletion of CTG repeats from human disease genes are determined by the direction of replication in E. coli , 1995, Nature Genetics.
[19] G. Fox,et al. DNA CTG triplet repeats involved in dynamic mutations of neurologically related gene sequences form stable duplexes. , 1995, Nucleic acids research.
[20] I. Haworth,et al. The trinucleotide repeat sequence d(GTC)15 adopts a hairpin conformation. , 1995, Nucleic acids research.
[21] K. Woodford,et al. CGG repeats associated with DNA instability and chromosome fragility form structures that block DNA synthesis in vitro. , 1995, Nucleic acids research.
[22] R. Sinden,et al. Differential DNA secondary structure-mediated deletion mutation in the leading and lagging strands , 1995, Journal of bacteriology.
[23] Competition between parental and recombinant plasmids affects the measure of recombination frequencies. , 1995, Plasmid.
[24] R. Wells,et al. Pausing of DNA Synthesis in Vitro at Specific Loci in CTG and CGG Triplet Repeats from Human Hereditary Disease Genes (*) , 1995, The Journal of Biological Chemistry.
[25] R. Sinden,et al. Mismatch repair in Escherichia coli enhances instability of (CTG)n triplet repeats from human hereditary diseases. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[26] A. Jackson,et al. In vitro expansion of GGC:GCC repeats: identification of the preferred strand of expansion. , 1996, Nucleic acids research.
[27] Myron F. Goodman,et al. Gene Targeting in Rat Embryo Fibroblasts Promoted by the Polyomavirus Large T Antigen Associated With Neurological Diseases , 1996 .
[28] R. Gellibolian,et al. Cloning, characterization and properties of plasmids containing CGG triplet repeats from the FMR-1 gene. , 1996, Journal of molecular biology.
[29] R. Sinden,et al. Single-stranded DNA-binding protein enhances the stability of CTG triplet repeats in Escherichia coli , 1996, Journal of bacteriology.
[30] R. Fleischmann,et al. DNA repeats identify novel virulence genes in Haemophilus influenzae. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[31] R. Sinden,et al. Relationship between Escherichia coli growth and deletions of CTG.CAG triplet repeats in plasmids. , 1996, Journal of molecular biology.
[32] R. Sinden,et al. Alternative structures in duplex DNA formed within the trinucleotide repeats of the myotonic dystrophy and fragile X loci. , 1996, Biochemistry.
[33] R. Wells. Molecular Basis of Genetic Instability of Triplet Repeats (*) , 1996, The Journal of Biological Chemistry.
[34] R. Sinden,et al. Erratum: Single-stranded DNA-binding protein enhances the stability of CTG triplet repeats in Escherichia coli (Journal of Bacteriology 178:16 (5042)) , 1996 .
[35] E. Wilson,et al. Reduced androgen receptor gene expression with first exon CAG repeat expansion. , 1996, Molecular endocrinology.
[36] S. Tapscott,et al. Trinucleotide repeat expansion at the myotonic dystrophy locus reduces expression of DMAHP , 1997, Nature Genetics.
[37] A. van Belkum,et al. UvA-DARE ( Digital Academic Repository ) Variable number of tandem repeats in clinical strains of Haemophilus influenzae , 1997 .
[38] R. Wells,et al. Transcription increases the deletion frequency of long CTG.CAG triplet repeats from plasmids in Escherichia coli. , 1997, Nucleic acids research.
[39] S. Mirkin,et al. Trinucleotide repeats affect DNA replication in vivo , 1997, Nature Genetics.
[40] B. Michel,et al. Isolation of a dnaE mutation which enhances RecA‐independent homologous recombination in the Escherichia coli chromosome , 1997, Molecular microbiology.
[41] S. Lovett,et al. Enhanced deletion formation by aberrant DNA replication in Escherichia coli. , 1997, Genetics.
[42] M. Yamada,et al. Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[43] M. Bichara,et al. Two distinct models account for short and long deletions within sequence repeats in Escherichia coli , 1997, Journal of bacteriology.
[44] T. Petes,et al. Genetic control of microsatellite stability. , 1997, Mutation research.
[45] S Lechat,et al. Differences and similarities between various tandem repeat sequences: minisatellites and microsatellites. , 1997, Biochimie.
[46] R. Wells,et al. Hairpin Formation during DNA Synthesis Primer Realignmentin Vitro in Triplet Repeat Sequences from Human Hereditary Disease Genes* , 1997, The Journal of Biological Chemistry.
[47] D. Sagher,et al. Role of proofreading and mismatch repair in maintaining the stability of nucleotide repeats in DNA. , 1997, Nucleic acids research.
[48] E. Eichler,et al. Interruptions in the triplet repeats of SCA1 and FRAXA reduce the propensity and complexity of slipped strand DNA (S-DNA) formation. , 1998, Biochemistry.
[49] A. Jackson,et al. Induction of microsatellite instability by oxidative DNA damage. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[50] M. Pandolfo,et al. Inhibitory Effects of Expanded GAA·TTC Triplet Repeats from Intron I of the Friedreich Ataxia Gene on Transcription and Replicationin Vivo * , 1998, The Journal of Biological Chemistry.
[51] S. Reddy,et al. CTG Repeats Show Bimodal Amplification in E. coli , 1998, Cell.
[52] R. Sinden,et al. Structural analysis of slipped-strand DNA (S-DNA) formed in (CTG)n. (CAG)n repeats from the myotonic dystrophy locus. , 1998, Nucleic acids research.
[53] P. Rice,et al. Identification of the gene (lgtG) encoding the lipooligosaccharide beta chain synthesizing glucosyl transferase from Neisseria gonorrhoeae. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[54] V. Mizrahi,et al. DNA repair in Mycobacterium tuberculosis. What have we learnt from the genome sequence? , 1998, Molecular microbiology.
[55] R. Frothingham,et al. Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats. , 1998, Microbiology.
[56] S. Ehrlich,et al. The role of SOS and flap processing in microsatellite instability in Escherichia coli. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[57] M. Goodman,et al. Analysis of Strand Slippage in DNA Polymerase Expansions of CAG/CTG Triplet Repeats Associated with Neurodegenerative Disease* , 1998, The Journal of Biological Chemistry.
[58] R. Gellibolian,et al. Small Slipped Register Genetic Instabilities in Escherichia coli in Triplet Repeat Sequences Associated with Hereditary Neurological Diseases* , 1998, The Journal of Biological Chemistry.
[59] J. Weiser,et al. Adaptation of Haemophilus influenzae to acquired and innate humoral immunity based on phase variation of lipopolysaccharide , 1998, Molecular microbiology.
[60] Alex van Belkum,et al. Short-Sequence DNA Repeats in Prokaryotic Genomes , 1998, Microbiology and Molecular Biology Reviews.
[61] M. Bichara,et al. Expansion of CTG repeats from human disease genes is dependent upon replication mechanisms in Escherichia coli: the effect of long patch mismatch repair revisited. , 1998, Journal of molecular biology.
[62] A EisenJ,et al. DNA修復遺伝子,タンパクと過程のphylogenomic(系統発生的ゲノム)調査 , 1999 .
[63] R. Wells,et al. Genetic Instabilities in (CTG·CAG) Repeats Occur by Recombination* , 1999, The Journal of Biological Chemistry.
[64] R. Fuchs,et al. Replication of damaged DNA: molecular defect in xeroderma pigmentosum variant cells. , 1999, Mutation research.
[65] B. Strauss,et al. Frameshift mutation, microsatellites and mismatch repair. , 1999, Mutation research.
[66] E. G. Frank,et al. UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[67] A. van Belkum,et al. Variable numbers of tandem repeat loci in genetically homogeneous Haemophilus influenzae strains alter during persistent colonisation of cystic fibrosis patients. , 1999, FEMS Microbiology Letters.
[68] J. Wagner,et al. The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis. , 1999, Molecular cell.
[69] S. Lovett,et al. Expansion of DNA repeats in Escherichia coli: effects of recombination and replication functions. , 1999, Journal of molecular biology.
[70] P. Hanawalt,et al. A phylogenomic study of DNA repair genes, proteins, and processes. , 1999, Mutation research.
[71] A. Kuzminov. Recombinational Repair of DNA Damage inEscherichia coli and Bacteriophage λ , 1999, Microbiology and Molecular Biology Reviews.
[72] R. Wells,et al. Nucleotide excision repair affects the stability of long transcribed (CTG*CAG) tracts in an orientation-dependent manner in Escherichia coli. , 1999, Nucleic acids research.
[73] Z. Livneh,et al. The Mutagenesis Protein UmuC Is a DNA Polymerase Activated by UmuD′, RecA, and SSB and Is Specialized for Translesion Replication* , 1999, The Journal of Biological Chemistry.
[74] R. Wells,et al. Expansion and Deletion of Triplet Repeat Sequences inEscherichia coli Occur on the Leading Strand of DNA Replication* , 1999, The Journal of Biological Chemistry.
[75] R. Wells,et al. Length of CTG.CAG repeats determines the influence of mismatch repair on genetic instability. , 2000, Journal of molecular biology.
[76] D. Leach,et al. The roles of mutS, sbcCD and recA in the propagation of TGG repeats in Escherichia coli. , 2000, Nucleic acids research.
[77] K. Eckert,et al. Mutational analyses of dinucleotide and tetranucleotide microsatellites in Escherichia coli: influence of sequence on expansion mutagenesis. , 2000, Nucleic acids research.
[78] D. Field,et al. The length of a tetranucleotide repeat tract in Haemophilus influenzae determines the phase variation rate of a gene with homology to type III DNA methyltransferases , 2000, Molecular microbiology.
[79] R. Wells,et al. Gene Conversion (Recombination) Mediates Expansions of CTG·CAG Repeats* , 2000, The Journal of Biological Chemistry.
[80] J. Wagner,et al. All three SOS‐inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis , 2000, The EMBO journal.
[81] A. Jackson,et al. Microsatellite instability induced by hydrogen peroxide in Escherichia coli. , 2000, Mutation research.
[82] R. Sinden,et al. DNA Polymerase III Proofreading Mutants Enhance the Expansion and Deletion of Triplet Repeat Sequences in Escherichia coli * , 2000, The Journal of Biological Chemistry.
[83] L. Reha-Krantz,et al. Dinucleotide Repeat Expansion Catalyzed by Bacteriophage T4 DNA Polymerase in Vitro * , 2000, The Journal of Biological Chemistry.
[84] A. L. La Spada,et al. In vivo expansion of trinucleotide repeats yields plasmid and YAC constructs for targeting and transgenesis. , 2000, Gene.
[85] H. Zoghbi,et al. Fourteen and counting: unraveling trinucleotide repeat diseases. , 2000, Human molecular genetics.
[86] R. Wells,et al. Genetic Instabilities of Triplet Repeat Sequences by Recombination , 2000, IUBMB life.
[87] H. Zoghbi,et al. Trinucleotide repeats: mechanisms and pathophysiology. , 2000, Annual review of genomics and human genetics.
[88] M. Bichara,et al. Mechanisms of dinucleotide repeat instability in Escherichia coli. , 2000, Genetics.
[89] T. Kunkel,et al. Streisinger revisited: DNA synthesis errors mediated by substrate misalignments. , 2000, Cold Spring Harbor symposia on quantitative biology.
[90] J. Wagner,et al. Escherichia coli DNA Polymerase IV Mutator Activity: Genetic Requirements and Mutational Specificity , 2000, Journal of bacteriology.
[91] C. Abbott,et al. Two opposing effects of mismatch repair on CTG repeat instability in Escherichia coli , 2000, Molecular microbiology.
[92] M. Yamada,et al. Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli , 2001, Molecular Genetics and Genomics.
[93] R. Wells,et al. GGA·TCC-interrupted Triplets in Long GAA·TTC Repeats Inhibit the Formation of Triplex and Sticky DNA Structures, Alleviate Transcription Inhibition, and Reduce Genetic Instabilities* , 2001, The Journal of Biological Chemistry.
[94] S. Ehrlich,et al. Replication slippage involves DNA polymerase pausing and dissociation , 2001, The EMBO journal.
[95] M. Cox,et al. Recombinational DNA repair of damaged replication forks in Escherichia coli: questions. , 2001, Annual review of genetics.
[96] C D Bayliss,et al. The simple sequence contingency loci of Haemophilus influenzae and Neisseria meningitidis. , 2001, The Journal of clinical investigation.
[97] R. Sinden,et al. Involvement of the Nucleotide Excision Repair Protein UvrA in Instability of CAG·CTG Repeat Sequences in Escherichia coli * , 2001, The Journal of Biological Chemistry.
[98] M. Bichara,et al. Modulation of transcription reveals a new mechanism of triplet repeat instability in Escherichia coli. , 2001, Journal of molecular biology.
[99] A. Richardson,et al. Mismatch repair and the regulation of phase variation in Neisseria meningitidis , 2001, Molecular microbiology.
[100] M. Pandolfo,et al. Sticky DNA, a Self-associated Complex Formed at Long GAA·TTC Repeats in Intron 1 of the Frataxin Gene, Inhibits Transcription* , 2001, The Journal of Biological Chemistry.
[101] M. Mock,et al. Diversity among French Bacillus anthracis Isolates , 2002, Journal of Clinical Microbiology.
[102] E. Nevo,et al. Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review , 2002, Molecular ecology.
[103] R. Sinden,et al. Instability of repeated DNAs during transformation in Escherichia coli. , 2002, Mutation research.
[104] J. Wagner,et al. Genetics of mutagenesis in E. coli: various combinations of translesion polymerases (Pol II, IV and V) deal with lesion/sequence context diversity. , 2002, DNA repair.
[105] E. Moxon,et al. Mutations in poll but not mutSLH destabilize Haemophilus influenzae tetranucleotide repeats , 2002, The EMBO journal.
[106] R. Fuchs,et al. How DNA lesions are turned into mutations within cells? , 2002, Oncogene.
[107] M. Dixon,et al. Examining the potential role of DNA polymerases η and ζ in triplet repeat instability in yeast , 2002 .
[108] Tanja Popovic,et al. Mutator clones of Neisseria meningitidis in epidemic serogroup A disease , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[109] C. E. Pearson,et al. Slipped-strand DNAs formed by long (CAG)*(CTG) repeats: slipped-out repeats and slip-out junctions. , 2002, Nucleic acids research.
[110] R. G. Lloyd,et al. Recombinational repair and restart of damaged replication forks , 2002, Nature Reviews Molecular Cell Biology.
[111] J. Wagner,et al. Pivotal role of the β-clamp in translesion DNA synthesis and mutagenesis in E. coli cells , 2002 .
[112] R. Wells,et al. Long CTG·CAG Repeats from Myotonic Dystrophy Are Preferred Sites for Intermolecular Recombination* , 2002, The Journal of Biological Chemistry.
[113] R. Sinden,et al. Genetic assays for measuring rates of (CAG).(CTG) repeat instability in Escherichia coli. , 2002, Mutation research.
[114] M. Cox. The nonmutagenic repair of broken replication forks via recombination. , 2002, Mutation research.
[115] R. Sinden,et al. Site-specific labeling of supercoiled DNA at the A+T rich sequences. , 2002, Biochemistry.
[116] X. De Bolle,et al. The length of a tetranucleotide repeat tract in Haemophilus influenzae determines the phase variation rate of a gene with homology to type III DNA methyltransferases , 2002 .
[117] Ray A Wickenheiser,et al. Trace DNA: a review, discussion of theory, and application of the transfer of trace quantities of DNA through skin contact. , 2002, Journal of forensic sciences.
[118] J. Wagner,et al. The processivity factor β controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo , 2002, EMBO reports.
[119] R. Wells,et al. Long CTG·CAG Repeat Sequences Markedly Stimulate Intramolecular Recombination* , 2002, The Journal of Biological Chemistry.
[120] R. Sinden,et al. Chemotherapeutically induced deletion of expanded triplet repeats. , 2002, Mutation research.
[121] Eric P. Skaar,et al. Recombination, repair and replication in the pathogenic Neisseriae: the 3 R′s of molecular genetics of two human‐specific bacterial pathogens , 2003, Molecular microbiology.
[122] M. Schofield,et al. DNA mismatch repair: molecular mechanisms and biological function. , 2003, Annual review of microbiology.
[123] R. Lahue,et al. DNA repair and trinucleotide repeat instability. , 2003, Frontiers in bioscience : a journal and virtual library.
[124] R. Fuchs,et al. Uncoupling of Leading- and Lagging-Strand DNA Replication During Lesion Bypass in Vivo , 2003, Science.
[125] Brooke L Heidenfelder,et al. Hairpin Formation in Friedreich's Ataxia Triplet Repeat Expansion* , 2003, The Journal of Biological Chemistry.
[126] M. W. van der Woude,et al. Phase and Antigenic Variation in Bacteria , 2004, Clinical Microbiology Reviews.
[127] E. Moxon,et al. Mutations in Haemophilus influenzae Mismatch Repair Genes Increase Mutation Rates of Dinucleotide Repeat Tracts but Not Dinucleotide Repeat-Driven Pilin Phase Variation Rates , 2004, Journal of bacteriology.
[128] E. Nevo,et al. Microsatellites within genes: structure, function, and evolution. , 2004, Molecular biology and evolution.
[129] J. Wagner,et al. Properties and functions of Escherichia coli: Pol IV and Pol V. , 2004, Advances in protein chemistry.
[130] R. Sinden,et al. Genetic recombination destabilizes (CTG)n.(CAG)n repeats in E. coli. , 2004, Mutation research.
[131] B. Michel,et al. Multiple pathways process stalled replication forks. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[132] J. Barrett,et al. Testing guidelines for hereditary non-polyposis colorectal cancer , 2004, Nature Reviews Cancer.
[133] Eric Buel,et al. Forensic DNA typing by capillary electrophoresis using the ABI Prism 310 and 3100 genetic analyzers for STR analysis , 2004, Electrophoresis.
[134] R. Wells,et al. Transcription influences the types of deletion and expansion products in an orientation-dependent manner from GAC*GTC repeats. , 2004, Nucleic acids research.
[135] D. Hood,et al. Involvement of genes of genome maintenance in the regulation of phase variation frequencies in Neisseria meningitidis. , 2004, Microbiology.
[136] R. Wells,et al. Hairpin Structure-forming Propensity of the (CCTG·CAGG) Tetranucleotide Repeats Contributes to the Genetic Instability Associated with Myotonic Dystrophy Type 2* , 2004, Journal of Biological Chemistry.
[137] E. Moxon,et al. Simple sequence repeats (microsatellites): mutational mechanisms and contributions to bacterial pathogenesis. A meeting review. , 2004, FEMS immunology and medical microbiology.
[138] R. Wells,et al. DNA double-strand breaks induce deletion of CTG.CAG repeats in an orientation-dependent manner in Escherichia coli. , 2004, Journal of molecular biology.
[139] E. Moxon,et al. Induction of the SOS regulon of Haemophilus influenzae does not affect phase variation rates at tetranucleotide or dinucleotide repeats. , 2005, Microbiology.
[140] D. Hood,et al. Microsatellite instability regulates transcription factor binding and gene expression. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[141] C. E. Pearson,et al. Repeat instability: mechanisms of dynamic mutations , 2005, Nature Reviews Genetics.
[142] R. Sinden,et al. Generation of long tracts of disease-associated DNA repeats. , 2005, BioTechniques.
[143] C. E. Pearson,et al. Replication fork dynamics and dynamic mutations: the fork-shift model of repeat instability. , 2005, Trends in genetics : TIG.
[144] D. Hilton‐Jones,et al. Clinical and molecular aspects of the myotonic dystrophies: A review , 2005, Muscle & nerve.
[145] E. Moxon,et al. Destabilization of tetranucleotide repeats in Haemophilus influenzae mutants lacking RnaseHI or the Klenow domain of PolI , 2005, Nucleic acids research.
[146] Huda Y. Zoghbi,et al. Diseases of Unstable Repeat Expansion: Mechanisms and Common Principles , 2005, Nature Reviews Genetics.
[147] Marek Napierala,et al. Advances in mechanisms of genetic instability related to hereditary neurological diseases , 2005, Nucleic acids research.
[148] Bjørn‐Arne Lindstedt,et al. Multiple‐locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria , 2005, Electrophoresis.
[149] Richard R. Sinden,et al. Triplet repeat DNA structures and human genetic disease: dynamic mutations from dynamic DNA , 2002, Journal of Biosciences.