The biochemical basis of mitochondrial dysfunction in Zellweger Spectrum Disorder
暂无分享,去创建一个
Katie J. Clowers | S. Gygi | J. Rutter | J. Bonkowsky | N. Braverman | I. Wittig | Esther Nuebel | J. Morgan | J. A. Berg | S. Fogarty | S. Lettlova | James E. Cox | Chelsea U. Kidwell | Minna Roh-Johnson | J. A. Maschek | Yu-Chan Chen | Jacob M Winter | Lingxiao Chen | C. Argyriou | Jacob M. Winter | Sandra Lettlova | J. Maschek
[1] Jacob Cohen. Statistical Power Analysis for the Behavioral Sciences , 1969, The SAGE Encyclopedia of Research Design.
[2] Andreas Martin,et al. The AAA+ ATPase Msp1 is a processive protein translocase with robust unfoldase activity , 2020, Proceedings of the National Academy of Sciences.
[3] P. Walter,et al. Structure of the AAA protein Msp1 reveals mechanism of mislocalized membrane protein extraction , 2020, eLife.
[4] Aaron R. Quinlan,et al. XPRESSyourself: Enhancing, Standardizing, and Automating Ribosome Profiling Computational Analyses Yields Improved Insight into Data , 2019, bioRxiv.
[5] S. Matsumoto,et al. Msp1 Clears Mistargeted Proteins by Facilitating Their Transfer from Mitochondria to the ER. , 2019, Molecular cell.
[6] N. Pfanner,et al. Coupling of import and assembly pathways in mitochondrial protein biogenesis , 2019, Biological chemistry.
[7] N. Braverman,et al. A longitudinal study of retinopathy in the PEX1-Gly844Asp mouse model for mild Zellweger Spectrum Disorder. , 2019, Experimental eye research.
[8] T. Rapoport,et al. Peroxisome protein import recapitulated in Xenopus egg extracts , 2019, The Journal of cell biology.
[9] Xianlin Han,et al. Phosphatidylethanolamine made in the inner mitochondrial membrane is essential for yeast cytochrome bc1 complex function , 2019, Nature Communications.
[10] R. Jansen,et al. The peroxisome biogenesis factors Pex3 and Pex19: multitasking proteins with disputed functions , 2019, FEBS letters.
[11] R. Green,et al. High-Resolution Ribosome Profiling Defines Discrete Ribosome Elongation States and Translational Regulation during Cellular Stress. , 2019, Molecular cell.
[12] Martin Eisenacher,et al. The PRIDE database and related tools and resources in 2019: improving support for quantification data , 2018, Nucleic Acids Res..
[13] Michael L. Waskom,et al. Decision Making through Integration of Sensory Evidence at Prolonged Timescales , 2018, Current Biology.
[14] Katie J. Clowers,et al. ACP Acylation Is an Acetyl-CoA-Dependent Modification Required for Electron Transport Chain Assembly. , 2018, Molecular cell.
[15] M. Schuldiner,et al. Systematic mapping of contact sites reveals tethers and a function for the peroxisome-mitochondria contact , 2018, Nature Communications.
[16] T. Dawson,et al. A homozygous ATAD1 mutation impairs postsynaptic AMPA receptor trafficking and causes a lethal encephalopathy , 2018, Brain : a journal of neurology.
[17] S. Ferdinandusse,et al. Mitochondrial disruption in peroxisome deficient cells is hepatocyte selective but is not mediated by common hepatic peroxisomal metabolites. , 2017, Mitochondrion.
[18] P. Rehling,et al. Plasticity of Mitochondrial Translation. , 2017, Trends in cell biology.
[19] Jan Dudek. Role of Cardiolipin in Mitochondrial Signaling Pathways , 2017, Front. Cell Dev. Biol..
[20] Vladimir Denic,et al. The AAA protein Msp1 mediates clearance of excess tail-anchored proteins from the peroxisomal membrane , 2017, bioRxiv.
[21] S. Ferdinandusse,et al. Identification of a novel mutation in PEX10 in a patient with attenuated Zellweger spectrum disorder: a case report , 2017, Journal of Medical Case Reports.
[22] R. Keenan,et al. Msp1 Is a Membrane Protein Dislocase for Tail-Anchored Proteins. , 2017, Molecular cell.
[23] G. Popowicz,et al. Inhibitors of PEX14 disrupt protein import into glycosomes and kill Trypanosoma parasites , 2017, Science.
[24] H. McBride,et al. Newly born peroxisomes are a hybrid of mitochondrial and ER-derived pre-peroxisomes , 2017, Nature.
[25] Joseph Huff,et al. The Fast mode for ZEISS LSM 880 with Airyscan: high-speed confocal imaging with super-resolution and improved signal-to-noise ratio , 2016, Nature Methods.
[26] Steven P Gygi,et al. Quantitative mass spectrometry-based multiplexing compares the abundance of 5000 S. cerevisiae proteins across 10 carbon sources. , 2016, Journal of proteomics.
[27] L. S. Churchman,et al. Synchronized translation programs across compartments during mitochondrial biogenesis , 2016 .
[28] Michael F. Wangler,et al. Peroxisome biogenesis disorders in the Zellweger spectrum: An overview of current diagnosis, clinical manifestations, and treatment guidelines. , 2016, Molecular genetics and metabolism.
[29] A. Motley,et al. Reevaluation of the role of Pex1 and dynamin-related proteins in peroxisome membrane biogenesis , 2015, The Journal of cell biology.
[30] Marc Engelen,et al. Zellweger spectrum disorders: clinical overview and management approach , 2015, Orphanet Journal of Rare Diseases.
[31] S. Ferdinandusse,et al. Zellweger spectrum disorders: clinical manifestations in patients surviving into adulthood , 2015, Journal of Inherited Metabolic Disease.
[32] D. Kirschner,et al. Plasmalogen phospholipids protect internodal myelin from oxidative damage. , 2015, Free radical biology & medicine.
[33] B. Zupan,et al. Genome-Wide Localization Study of Yeast Pex11 Identifies Peroxisome–Mitochondria Interactions through the ERMES Complex , 2015, Journal of molecular biology.
[34] The Uniprot Consortium,et al. UniProt: a hub for protein information , 2014, Nucleic Acids Res..
[35] P. Kim,et al. PEX16 contributes to peroxisome maintenance by constantly trafficking PEX3 via the ER , 2014, Journal of Cell Science.
[36] I. J. van der Klei,et al. Evolving models for peroxisome biogenesis , 2014, Current opinion in cell biology.
[37] S. Gygi,et al. Msp1/ATAD1 maintains mitochondrial function by facilitating the degradation of mislocalized tail‐anchored proteins , 2014, The EMBO journal.
[38] Edward L. Huttlin,et al. MultiNotch MS3 Enables Accurate, Sensitive, and Multiplexed Detection of Differential Expression across Cancer Cell Line Proteomes , 2014, Analytical chemistry.
[39] P. Walter,et al. The conserved AAA-ATPase Msp1 confers organelle specificity to tail-anchored proteins , 2014, Proceedings of the National Academy of Sciences.
[40] T. Salt,et al. Recharging mitochondrial batteries in old eyes. Near infra-red increases ATP. , 2014, Experimental eye research.
[41] D. Crane. Revisiting the neuropathogenesis of Zellweger syndrome , 2014, Neurochemistry International.
[42] D. Bartel,et al. Poly(A)-tail profiling reveals an embryonic switch in translational control , 2014, Nature.
[43] Jennifer J. Smith,et al. Peroxisomes take shape , 2013, Nature Reviews Molecular Cell Biology.
[44] H. Tabak,et al. Peroxisome formation and maintenance are dependent on the endoplasmic reticulum. , 2013, Annual review of biochemistry.
[45] L. Peshkin,et al. Accurate multiplexed proteomics at the MS2 level using the complement reporter ion cluster. , 2012, Analytical chemistry.
[46] A. Reichert,et al. Complexome profiling identifies TMEM126B as a component of the mitochondrial complex I assembly complex. , 2012, Cell metabolism.
[47] J. Martinou,et al. Intermembrane Space Proteome of Yeast Mitochondria* , 2012, Molecular & Cellular Proteomics.
[48] Edward L. Huttlin,et al. Increasing the multiplexing capacity of TMTs using reporter ion isotopologues with isobaric masses. , 2012, Analytical chemistry.
[49] Johannes E. Schindelin,et al. Fiji: an open-source platform for biological-image analysis , 2012, Nature Methods.
[50] M. Teitell,et al. Measuring energy metabolism in cultured cells, including human pluripotent stem cells and differentiated cells , 2012, Nature Protocols.
[51] T. Uchiumi,et al. Localization of mRNAs encoding human mitochondrial oxidative phosphorylation proteins. , 2012, Mitochondrion.
[52] S. Oeljeklaus,et al. Identification of core components and transient interactors of the peroxisomal importomer by dual-track stable isotope labeling with amino acids in cell culture analysis. , 2012, Journal of proteome research.
[53] Stephen J. Smith,et al. High-contrast en bloc staining of neuronal tissue for field emission scanning electron microscopy , 2012, Nature Protocols.
[54] H. Braun,et al. Defining the Protein Complex Proteome of Plant Mitochondria1[W] , 2011, Plant Physiology.
[55] Edward L. Huttlin,et al. A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression , 2010, Cell.
[56] R. Erdmann,et al. Peroxisomal protein translocation. , 2010, Biochimica et biophysica acta.
[57] W. Schliebs,et al. The peroxisomal importomer constitutes a large and highly dynamic pore , 2010, Nature Cell Biology.
[58] Wes McKinney,et al. Data Structures for Statistical Computing in Python , 2010, SciPy.
[59] J. Gerst,et al. Localization of mRNAs coding for peroxisomal proteins in the yeast, Saccharomyces cerevisiae , 2009, Proceedings of the National Academy of Sciences.
[60] S. Sawilowsky. Very large and huge effect sizes , 2009 .
[61] J. Cancino,et al. Pex3p‐dependent peroxisomal biogenesis initiates in the endoplasmic reticulum of human fibroblasts , 2009, Journal of cellular biochemistry.
[62] P. Yaswen,et al. A Versatile Viral System for Expression and Depletion of Proteins in Mammalian Cells , 2009, PloS one.
[63] A. Shevchenko,et al. Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics. , 2008, Journal of lipid research.
[64] Michael Schrader,et al. Mitochondria and peroxisomes: Are the ‘Big Brother’ and the ‘Little Sister’ closer than assumed? , 2007, BioEssays : news and reviews in molecular, cellular and developmental biology.
[65] John D. Hunter,et al. Matplotlib: A 2D Graphics Environment , 2007, Computing in Science & Engineering.
[66] Steven P Gygi,et al. Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry , 2007, Nature Methods.
[67] Richard Kovács,et al. Mitochondria and neuronal activity. , 2007, American journal of physiology. Cell physiology.
[68] I. Boldogh,et al. Purification and subfractionation of mitochondria from the yeast Saccharomyces cerevisiae. , 2007, Methods in cell biology.
[69] B. Distel,et al. Pex13p: docking or cargo handling protein? , 2006, Biochimica et biophysica acta.
[70] M. Schrader,et al. Peroxisomes and Disease - An Overview , 2006, International journal of biomedical science : IJBS.
[71] Steven P Gygi,et al. A probability-based approach for high-throughput protein phosphorylation analysis and site localization , 2006, Nature Biotechnology.
[72] K. Rosenkranz,et al. Targeting of the tail-anchored peroxisomal membrane proteins PEX26 and PEX15 occurs through C-terminal PEX19-binding sites , 2006, Journal of Cell Science.
[73] Peter K. Kim,et al. JCB: ARTICLE The , 2022 .
[74] H. Schägger,et al. Blue native PAGE , 2006, Nature Protocols.
[75] Peter Philippsen,et al. Contribution of the Endoplasmic Reticulum to Peroxisome Formation , 2005, Cell.
[76] K. Tokatlidis. A Disulfide Relay System in Mitochondria , 2005, Cell.
[77] H. Waterham,et al. Novel Mutations in the PEX2 Gene of Four Unrelated Patients with a Peroxisome Biogenesis Disorder , 2004, Pediatric Research.
[78] H. Waterham,et al. Novel mutations in the PEX12 gene of patients with a peroxisome biogenesis disorder , 2004, European Journal of Human Genetics.
[79] S. Gould,et al. PEX19 is a predominantly cytosolic chaperone and import receptor for class 1 peroxisomal membrane proteins , 2004, The Journal of cell biology.
[80] Rainer Breitling,et al. Loss of Compartmentalization Causes Misregulation of Lysine Biosynthesis in Peroxisome-Deficient Yeast Cells , 2002, Eukaryotic Cell.
[81] P. Mayerhofer,et al. Defective peroxisome membrane synthesis due to mutations in human PEX3 causes Zellweger syndrome, complementation group G. , 2000, American journal of human genetics.
[82] D. Winge,et al. A dual role for zinc fingers in both DNA binding and zinc sensing by the Zap1 transcriptional activator , 2000, The EMBO journal.
[83] S. South,et al. Inhibitors of Copi and Copii Do Not Block PEX3-Mediated Peroxisome Synthesis , 2000, The Journal of cell biology.
[84] S. South,et al. Pex19 Binds Multiple Peroxisomal Membrane Proteins, Is Predominantly Cytoplasmic, and Is Required for Peroxisome Membrane Synthesis , 2000, The Journal of cell biology.
[85] M. van den Berg,et al. Saccharomyces cerevisiae Pex3p and Pex19p are required for proper localization and stability of peroxisomal membrane proteins , 2000, The EMBO journal.
[86] J. Mccusker,et al. Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae , 1999, Yeast.
[87] B. Huhse,et al. Pex17p of Saccharomyces cerevisiae Is a Novel Peroxin and Component of the Peroxisomal Protein Translocation Machinery , 1998, The Journal of cell biology.
[88] S. Subramani,et al. Import of stably folded proteins into peroxisomes. , 1995, Molecular biology of the cell.
[89] P. Philippsen,et al. New heterologous modules for classical or PCR‐based gene disruptions in Saccharomyces cerevisiae , 1994, Yeast.
[90] J. Goodman,et al. An oligomeric protein is imported into peroxisomes in vivo , 1994, The Journal of cell biology.
[91] R. Schiestl,et al. Improved method for high efficiency transformation of intact yeast cells. , 1992, Nucleic acids research.
[92] V. Neuhoff,et al. Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G‐250 and R‐250 , 1988, Electrophoresis.
[93] I. Rapin,et al. Peroxisomal and Mitochondrial Defects in the Cerebro-Hepato-Renal Syndrome , 1973, Science.