NumtS colonization in mammalian genomes
暂无分享,去创建一个
M. Attimonelli | M. Ventura | R. Preste | F. Calabrese | M. Diroma | D. Balacco | R. Forino | F. M. Calabrese
[1] W. Martin,et al. Quantifying the Number of Independent Organelle DNA Insertions in Genome Evolution and Human Health , 2017, Genome biology and evolution.
[2] Sudhir Kumar,et al. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.
[3] I. Johnston,et al. Evolutionary Inference across Eukaryotes Identifies Specific Pressures Favoring Mitochondrial Gene Retention. , 2016, Cell systems.
[4] Sudhir Kumar,et al. Tree of Life Reveals Clock-Like Speciation and Diversification , 2014, Molecular biology and evolution.
[5] Marcella Attimonelli,et al. Primates and mouse NumtS in the UCSC Genome Browser , 2012, BMC Bioinformatics.
[6] M. Rousseau-Gueutin,et al. Plastid DNA in the nucleus , 2012, Plant signaling & behavior.
[7] M. Attimonelli,et al. Polymorphic NumtS trace human population relationships , 2011, Human Genetics.
[8] Marcella Attimonelli,et al. The reference human nuclear mitochondrial sequences compilation validated and implemented on the UCSC genome browser , 2011, BMC Genomics.
[9] D. Higgins,et al. Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega , 2011, Molecular systems biology.
[10] Paramvir S. Dehal,et al. FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments , 2010, PloS one.
[11] W. Martin,et al. Molecular Poltergeists: Mitochondrial DNA Copies (numts) in Sequenced Nuclear Genomes , 2010, PLoS genetics.
[12] Christian M. Zmasek,et al. phyloXML: XML for evolutionary biology and comparative genomics , 2009, BMC Bioinformatics.
[13] E. Eichler,et al. The origins and impact of primate segmental duplications. , 2009, Trends in genetics : TIG.
[14] Einat Hazkani-Covo. Mitochondrial insertions into primate nuclear genomes suggest the use of numts as a tool for phylogeny. , 2009, Molecular biology and evolution.
[15] M. Jensen-Seaman,et al. A Comparative Approach Shows Differences in Patterns of Numt Insertion During Hominoid Evolution , 2009, Journal of Molecular Evolution.
[16] T. Kleine,et al. DNA transfer from organelles to the nucleus: the idiosyncratic genetics of endosymbiosis. , 2009, Annual review of plant biology.
[17] Geoffrey J. Barton,et al. Jalview Version 2—a multiple sequence alignment editor and analysis workbench , 2009, Bioinform..
[18] S. Covo,et al. Numt-Mediated Double-Strand Break Repair Mitigates Deletions during Primate Genome Evolution , 2008, PLoS genetics.
[19] Miriam K. Konkel,et al. Genome analysis of the platypus reveals unique signatures of evolution , 2008, Nature.
[20] M. Attimonelli,et al. The RHNumtS compilation: Features and bioinformatics approaches to locate and quantify Human NumtS , 2008, BMC Genomics.
[21] J. DeWoody,et al. Extensive mitochondrial DNA transfer in a rapidly evolving rodent has been mediated by independent insertion events and by duplications. , 2007, Gene.
[22] S. Behura. Analysis of nuclear copies of mitochondrial sequences in honeybee (Apis mellifera) genome. , 2007, Molecular biology and evolution.
[23] Adrian Gherman,et al. Population Bottlenecks as a Potential Major Shaping Force of Human Genome Architecture , 2007, PLoS genetics.
[24] P. Pamilo,et al. Exceptionally high density of NUMTs in the honeybee genome. , 2007, Molecular biology and evolution.
[25] Dan Graur,et al. A comparative analysis of numt evolution in human and chimpanzee. , 2007, Molecular biology and evolution.
[26] D. Leister. Origin, evolution and genetic effects of nuclear insertions of organelle DNA. , 2005, Trends in genetics : TIG.
[27] Fredj Tekaia,et al. Continued Colonization of the Human Genome by Mitochondrial DNA , 2004, PLoS biology.
[28] Dario Leister,et al. NUMTs in sequenced eukaryotic genomes. , 2004, Molecular biology and evolution.
[29] R. Sorek,et al. Evolutionary Dynamics of Large Numts in the Human Genome: Rarity of Independent Insertions and Abundance of Post-Insertion Duplications , 2003, Journal of Molecular Evolution.
[30] D. Haussler,et al. Human-mouse alignments with BLASTZ. , 2003, Genome research.
[31] M. Woischnik,et al. Pattern of organization of human mitochondrial pseudogenes in the nuclear genome. , 2002, Genome research.
[32] Cécile Fairhead,et al. Mitochondrial DNA repairs double-strand breaks in yeast chromosomes , 1999, Nature.
[33] B. Lang,et al. Mitochondrial evolution. , 1999, Science.
[34] B F Lang,et al. Mitochondrial evolution. , 1999, Science.
[35] Sean R. Eddy,et al. Profile hidden Markov models , 1998, Bioinform..
[36] P. Thorsness,et al. Escape and migration of nucleic acids between chloroplasts, mitochondria, and the nucleus. , 1996, International review of cytology.
[37] J. Blanchard,et al. Mitochondrial DNA migration events in yeast and humans: integration by a common end-joining mechanism and alternative perspectives on nucleotide substitution patterns. , 1996, Molecular biology and evolution.
[38] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[39] P. Thorsness,et al. Escape of DNA from mitochondria to the nucleus in Saccharomyces cerevisiae , 1990, Nature.
[40] C R Woese,et al. Mitochondrial origins. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[41] F. Riley,et al. HYBRIDIZATION BETWEEN THE NUCLEAR AND KINETOPLAST DNA'S OF Leishmania enriettii AND BETWEEN NUCLEAR AND MITOCHONDRIAL DNA'S OF MOUSE LIVER. , 1967, Proceedings of the National Academy of Sciences of the United States of America.