Genome-wide identification of AGO18b-bound miRNAs and phasiRNAs in maize by cRIP-seq
暂无分享,去创建一个
Lihong Zhai | Wei Sun | Zuxin Zhang | Lei Liu | Danfeng Zhang | Dong Chen | Yi Zhang | Chao Cheng | Zheng Cao | Yaqiang Xue
[1] Jernej Ule,et al. Advances in CLIP Technologies for Studies of Protein-RNA Interactions. , 2018, Molecular cell.
[2] Lihong Zhai,et al. AGO18b negatively regulates determinacy of spikelet meristems on the tassel central spike in maize. , 2018, Journal of integrative plant biology.
[3] A. Carlsbecker,et al. Class III HD-ZIPs govern vascular cell fate: an HD view on patterning and differentiation. , 2017, Journal of experimental botany.
[4] B. Meyers,et al. Dynamic changes of small RNAs in rice spikelet development reveal specialized reproductive phasiRNA pathways , 2016, Journal of experimental botany.
[5] M. Heisler,et al. Regulation of MIR165/166 by class II and class III homeodomain leucine zipper proteins establishes leaf polarity , 2016, Proceedings of the National Academy of Sciences.
[6] Hailong Yang,et al. Identification and functional characterization of the AGO1 ortholog in maize , 2016, Journal of integrative plant biology.
[7] V. Walbot,et al. Evolution, functions, and mysteries of plant ARGONAUTE proteins. , 2015, Current opinion in plant biology.
[8] R. Varshney,et al. High throughput sequencing of small RNA component of leaves and inflorescence revealed conserved and novel miRNAs as well as phasiRNA loci in chickpea. , 2015, Plant science : an international journal of experimental plant biology.
[9] Xiuren Zhang,et al. Spatiotemporal sequestration of miR165/166 by Arabidopsis Argonaute10 promotes shoot apical meristem maintenance. , 2015, Cell reports.
[10] V. Walbot,et al. Spatiotemporally dynamic, cell-type–dependent premeiotic and meiotic phasiRNAs in maize anthers , 2015, Proceedings of the National Academy of Sciences.
[11] Ke Zhang,et al. Identification and characterization of Argonaute gene family and meiosis-enriched Argonaute during sporogenesis in maize. , 2014, Journal of integrative plant biology.
[12] J. Micol,et al. AGO1 controls arabidopsis inflorescence architecture possibly by regulating TFL1 expression. , 2014, Annals of botany.
[13] Toshiaki Watanabe,et al. Rice germline-specific Argonaute MEL1 protein binds to phasiRNAs generated from more than 700 lincRNAs. , 2014, The Plant journal : for cell and molecular biology.
[14] Tao Lu,et al. Identification of RNA silencing components in soybean and sorghum , 2014, BMC Bioinformatics.
[15] G. Meister. Argonaute proteins: functional insights and emerging roles , 2013, Nature Reviews Genetics.
[16] J. Zhai,et al. Biogenesis and function of rice small RNAs from non-coding RNA precursors. , 2013, Current opinion in plant biology.
[17] Cole Trapnell,et al. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions , 2013, Genome Biology.
[18] Xiuren Zhang,et al. Argonautes compete for miR165/166 to regulate shoot apical meristem development. , 2012, Current opinion in plant biology.
[19] M. Siomi,et al. Biology of PIWI-interacting RNAs: new insights into biogenesis and function inside and outside of germlines. , 2012, Genes & development.
[20] Josh T. Cuperus,et al. Functional Analysis of Three Arabidopsis ARGONAUTES Using Slicer-Defective Mutants[W][OA] , 2012, Plant Cell.
[21] Lijia Ma,et al. Roles of DCL4 and DCL3b in rice phased small RNA biogenesis. , 2012, The Plant journal : for cell and molecular biology.
[22] M. Schmid,et al. The control of developmental phase transitions in plants , 2011, Development.
[23] Patrick Xuechun Zhao,et al. psRNATarget: a plant small RNA target analysis server , 2011, Nucleic Acids Res..
[24] Hongliang Zhu,et al. Arabidopsis Argonaute10 Specifically Sequesters miR166/165 to Regulate Shoot Apical Meristem Development , 2011, Cell.
[25] M. Schmid,et al. Regulation of flowering time: all roads lead to Rome , 2011, Cellular and Molecular Life Sciences.
[26] Xuemei Chen,et al. ARGONAUTE10 and ARGONAUTE1 Regulate the Termination of Floral Stem Cells through Two MicroRNAs in Arabidopsis , 2011, PLoS genetics.
[27] E. Izaurralde,et al. Gene silencing by microRNAs: contributions of translational repression and mRNA decay , 2011, Nature Reviews Genetics.
[28] Manjit Singh,et al. Production of Viable Gametes without Meiosis in Maize Deficient for an ARGONAUTE Protein[W] , 2011, Plant Cell.
[29] H. Vaucheret,et al. Form, Function, and Regulation of ARGONAUTE Proteins , 2010, Plant Cell.
[30] Qian Qian,et al. Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice , 2010, Nature Genetics.
[31] Makoto Matsuoka,et al. OsSPL14 promotes panicle branching and higher grain productivity in rice , 2010, Nature Genetics.
[32] R. Martienssen,et al. Control of female gamete formation by a small RNA pathway in Arabidopsis , 2010, Nature.
[33] Y. Qi,et al. Rice MicroRNA Effector Complexes and Targets[C][W] , 2009, The Plant Cell Online.
[34] Detlef Weigel,et al. The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis , 2009, Cell.
[35] Cameron Johnson,et al. Clusters and superclusters of phased small RNAs in the developing inflorescence of rice. , 2009, Genome research.
[36] Stefano Torti,et al. From decision to commitment: the molecular memory of flowering. , 2009, Molecular plant.
[37] A. Mele,et al. Ago HITS-CLIP decodes miRNA-mRNA interaction maps , 2009, Nature.
[38] Hai Huang,et al. The ARGONAUTE10 gene modulates shoot apical meristem maintenance and establishment of leaf polarity by repressing miR165/166 in Arabidopsis. , 2009, The Plant journal : for cell and molecular biology.
[39] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[40] Jitendra P Khurana,et al. Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice , 2008, BMC Genomics.
[41] Gregory J. Hannon,et al. Sorting of Small RNAs into Arabidopsis Argonaute Complexes Is Directed by the 5′ Terminal Nucleotide , 2008, Cell.
[42] H. Vaucheret,et al. Plant ARGONAUTES. , 2008, Trends in plant science.
[43] Sarah Hake,et al. The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA , 2007, Nature Genetics.
[44] Jae-Hoon Jung,et al. MIR166/165 genes exhibit dynamic expression patterns in regulating shoot apical meristem and floral development in Arabidopsis , 2007, Planta.
[45] D. Cosgrove. Growth of the plant cell wall , 2005, Nature Reviews Molecular Cell Biology.
[46] P. Springer,et al. Architecture of floral branch systems in maize and related grasses , 2005, Nature.
[47] Xuemei Chen,et al. A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development , 2004, Science.
[48] C. Kidner,et al. Spatially restricted microRNA directs leaf polarity through ARGONAUTE1 , 2004, Nature.
[49] Hajime Sakai,et al. Regulation of Flowering Time and Floral Organ Identity by a MicroRNA and Its APETALA2-Like Target Genes Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.016238. , 2003, The Plant Cell Online.
[50] Hilde van der Togt,et al. Publisher's Note , 2003, J. Netw. Comput. Appl..
[51] M. Matsuoka,et al. OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice. , 2002, The Plant journal : for cell and molecular biology.
[52] P. Masson,et al. The PINHEAD/ZWILLE gene acts pleiotropically in Arabidopsis development and has overlapping functions with the ARGONAUTE1 gene. , 1999, Development.
[53] G. Jürgens,et al. Role of the ZWILLE gene in the regulation of central shoot meristem cell fate during Arabidopsis embryogenesis , 1998, The EMBO journal.
[54] M. Van Montagu,et al. Control of Arabidopsis flower and seed development by the homeotic gene APETALA2. , 1994, The Plant cell.
[55] S. Hake,et al. Maize Floral Development: New Genes and Old Mutants. , 1993, The Plant cell.
[56] S. Shannon,et al. Genetic Interactions That Regulate Inflorescence Development in Arabidopsis. , 1993, The Plant cell.