Using mammalian GFP reconstitution across synaptic partners (mGRASP) to map synaptic connectivity in the mouse brain

Many types of questions in neuroscience require the detection and mapping of synapses in the complex mammalian brain. A tool, mammalian GFP reconstitution across synaptic partners (mGRASP), offers a relatively easy, quick and economical approach to this technically challenging task. Here we describe in step-by-step detail the protocols for virus production, gene delivery, brain specimen preparation, fluorescence imaging and image analysis, calibrated substantially and specifically to make mGRASP-assisted circuit mapping (mGRASPing) practical in the mouse brain. The protocol includes troubleshooting suggestions and solutions to common problems. The mGRASP method is suitable for mapping mammalian synaptic connectivity at multiple scales: microscale for synapse-by-synapse or neuron-by-neuron analysis, and mesoscale for revealing local and long-range circuits. The entire protocol takes 5–6 weeks, including time for incubation and virus expression.

[1]  Tetsuichiro Saito In vivo electroporation in the embryonic mouse central nervous system , 2006, Nature Protocols.

[2]  S. Shi,et al.  Specific synapses develop preferentially among sister excitatory neurons in the neocortex , 2009, Nature.

[3]  Jeff W Lichtman,et al.  Why not connectomics? , 2013, Nature Methods.

[4]  Arthur W. Wetzel,et al.  Network anatomy and in vivo physiology of visual cortical neurons , 2011, Nature.

[5]  H. Sawada,et al.  Quantitative Comparison of Anti-Fading Mounting Media for Confocal Laser Scanning Microscopy , 2001, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[6]  R. W. Draft,et al.  Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system , 2007, Nature.

[7]  Steffen Prohaska,et al.  Large-Scale Automated Histology in the Pursuit of Connectomes , 2011, The Journal of Neuroscience.

[8]  Stephen J. Smith,et al.  Array Tomography: A New Tool for Imaging the Molecular Architecture and Ultrastructure of Neural Circuits , 2007, Neuron.

[9]  Tarik F Haydar,et al.  Long-Term, Selective Gene Expression in Developing and Adult Hippocampal Pyramidal Neurons Using Focal In Utero Electroporation , 2007, The Journal of Neuroscience.

[10]  J. Magee,et al.  Structured Synaptic Connectivity between Hippocampal Regions , 2014, Neuron.

[11]  Kevin L. Briggman,et al.  Wiring specificity in the direction-selectivity circuit of the retina , 2011, Nature.

[12]  Jinhyun Kim,et al.  Improved synapse detection for mGRASP-assisted brain connectivity mapping , 2012, Bioinform..

[13]  Pavel Osten,et al.  Stereotaxic gene delivery in the rodent brain , 2007, Nature Protocols.

[14]  J. Wojtowicz,et al.  BrdU assay for neurogenesis in rodents , 2006, Nature Protocols.

[15]  J. Grieger,et al.  Production and characterization of adeno-associated viral vectors , 2006, Nature Protocols.

[16]  Allan R. Jones,et al.  A mesoscale connectome of the mouse brain , 2014, Nature.

[17]  Arthur W. Toga,et al.  Neural Networks of the Mouse Neocortex , 2014, Cell.

[18]  Cori Bargmann,et al.  GFP Reconstitution Across Synaptic Partners (GRASP) Defines Cell Contacts and Synapses in Living Nervous Systems , 2008, Neuron.

[19]  J. Sanes,et al.  Transgenic strategy for identifying synaptic connections in mice by fluorescence complementation (GRASP) , 2012, Front. Mol. Neurosci..

[20]  Jinhyung Kim,et al.  Mapping mammalian synaptic connectivity , 2013, Cellular and Molecular Life Sciences.

[21]  Hanchuan Peng,et al.  mGRASP enables mapping mammalian synaptic connectivity with light microscopy , 2011, Nature Methods.

[22]  Kristina D. Micheva,et al.  Single-Synapse Analysis of a Diverse Synapse Population: Proteomic Imaging Methods and Markers , 2010, Neuron.

[23]  Ian R. Wickersham,et al.  Monosynaptic Restriction of Transsynaptic Tracing from Single, Genetically Targeted Neurons , 2007, Neuron.

[24]  Ian R. Wickersham,et al.  New technologies for imaging synaptic partners , 2012, Current Opinion in Neurobiology.

[25]  J. Sanes,et al.  Improved tools for the Brainbow toolbox. , 2013, Nature methods.