Computer Methods and Programs in Biomedicine

Background and objectives: The number of deaths worldwide due to melanoma has risen in recent times, in part because melanoma is the most aggressive type of skin cancer. Computational systems have been developed to assist dermatologists in early diagnosis of skin cancer, or even to monitor skin lesions. How- ever, there still remains a challenge to improve classifiers for the diagnosis of such skin lesions. The main objective of this article is to evaluate different ensemble classification models based on input feature ma- nipulation to diagnose skin lesions. Methods: Input feature manipulation processes are based on feature subset selections from shape properties, colour variation and texture analysis to generate diversity for the ensemble models. Three subset selection models are presented here: (1) a subset selection model based on specific feature groups, (2) a correlation-based subset selection model, and (3) a subset selec- tion model based on feature selection algorithms. Each ensemble classification model is generated using an optimum-path forest classifier and integrated with a majority voting strategy. The proposed models were applied on a set of 1104 dermoscopic images using a cross-validation procedure. Results: The best results were obtained by the first ensemble classification model that generates a feature subset ensemble based on specific feature groups. The skin lesion diagnosis computational system achieved 94.3% accuracy, 91.8% sensitivity and 96.7% specificity. Conclusions: The input feature manipulation process based on specific feature subsets generated the greatest diversity for the ensemble classification model with very promising results.

[1]  L. Breiman Random Forests , 2001, Machine Learning.

[2]  João Paulo Papa,et al.  Computational methods for pigmented skin lesion classification in images: review and future trends , 2018, Neural Computing and Applications.

[3]  Hao Chen,et al.  Automated Melanoma Recognition in Dermoscopy Images via Very Deep Residual Networks , 2017, IEEE Transactions on Medical Imaging.

[4]  Yang Li,et al.  Melanoma Classification on Dermoscopy Images Using a Neural Network Ensemble Model , 2017, IEEE Transactions on Medical Imaging.

[5]  João Manuel R. S. Tavares,et al.  A computational approach for detecting pigmented skin lesions in macroscopic images , 2016, Expert Syst. Appl..

[6]  Zhen Ma,et al.  A Novel Approach to Segment Skin Lesions in Dermoscopic Images Based on a Deformable Model , 2016, IEEE Journal of Biomedical and Health Informatics.

[7]  Franck Marzani,et al.  Tackling the Problem of Data Imbalancing for Melanoma Classification , 2016, BIOIMAGING.

[8]  Jorge S. Marques,et al.  Melanoma detection algorithm based on feature fusion , 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

[9]  Qiang Chen,et al.  Accurate and Scalable System for Automatic Detection of Malignant Melanoma , 2015 .

[10]  Huiyu Zhou,et al.  A State-of-the-Art Survey on Lesion Border Detection in Dermoscopy Images , 2015 .

[11]  Franck Marzani,et al.  Automatic differentiation of melanoma from dysplastic nevi , 2015, Comput. Medical Imaging Graph..

[12]  Olivier Morel,et al.  Ensemble approach for differentiation of malignant melanoma , 2015, International Conference on Quality Control by Artificial Vision.

[13]  Sharath Pankanti,et al.  A generalized framework for medical image classification and recognition , 2015, IBM J. Res. Dev..

[14]  M. E. Celebi,et al.  An ensemble classification approach for melanoma diagnosis , 2014, Memetic Comput..

[15]  Jorge S. Marques,et al.  Two Systems for the Detection of Melanomas in Dermoscopy Images Using Texture and Color Features , 2014, IEEE Systems Journal.

[16]  Alexandre X. Falcão,et al.  Semi-supervised Pattern Classification Using Optimum-Path Forest , 2014, 2014 27th SIBGRAPI Conference on Graphics, Patterns and Images.

[17]  Moacir P. Ponti,et al.  Ensembles of Optimum-Path Forest Classifiers Using Input Data Manipulation and Undersampling , 2013, MCS.

[18]  James Bailey,et al.  Computer-Aided Diagnosis of Melanoma Using Border- and Wavelet-Based Texture Analysis , 2012, IEEE Transactions on Information Technology in Biomedicine.

[19]  Ingmar Lissner,et al.  Toward a Unified Color Space for Perception-Based Image Processing , 2012, IEEE Transactions on Image Processing.

[20]  Masaru Tanaka,et al.  Classification of melanocytic skin lesions from non-melanocytic lesions , 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology.

[21]  Ilias Maglogiannis,et al.  Skin lesion diagnosis from images using novel ensemble classification techniques , 2010, Proceedings of the 10th IEEE International Conference on Information Technology and Applications in Biomedicine.

[22]  Ilias Maglogiannis,et al.  Overview of Advanced Computer Vision Systems for Skin Lesions Characterization , 2009, IEEE Transactions on Information Technology in Biomedicine.

[23]  João Paulo Papa,et al.  Supervised pattern classification based on optimum‐path forest , 2009, Int. J. Imaging Syst. Technol..

[24]  Gerald Schaefer,et al.  Lesion border detection in dermoscopy images , 2009, Comput. Medical Imaging Graph..

[25]  Bipin C. Desai,et al.  A multiple expert-based melanoma recognition system for dermoscopic images of pigmented skin lesions , 2008, 2008 8th IEEE International Conference on BioInformatics and BioEngineering.

[26]  Randy H. Moss,et al.  Automatic detection of blue-white veil and related structures in dermoscopy images , 2008, Comput. Medical Imaging Graph..

[27]  Randy H. Moss,et al.  A methodological approach to the classification of dermoscopy images , 2007, Comput. Medical Imaging Graph..

[28]  J. Tasic,et al.  Colour spaces: perceptual, historical and applicational background , 2003, The IEEE Region 8 EUROCON 2003. Computer as a Tool..

[29]  M. G. Fleming,et al.  Dermoscopy of pigmented skin lesions: results of a consensus meeting via the Internet. , 2003, Journal of the American Academy of Dermatology.

[30]  Isabelle Guyon,et al.  An Introduction to Variable and Feature Selection , 2003, J. Mach. Learn. Res..

[31]  Thomas G. Dietterich Multiple Classifier Systems , 2000, Lecture Notes in Computer Science.

[32]  Mark A. Hall,et al.  Correlation-based Feature Selection for Discrete and Numeric Class Machine Learning , 1999, ICML.

[33]  Yoav Freund,et al.  A decision-theoretic generalization of on-line learning and an application to boosting , 1997, EuroCOLT.

[34]  Huan Liu,et al.  Feature Selection for Classification , 1997, Intell. Data Anal..

[35]  Ron Kohavi,et al.  A Study of Cross-Validation and Bootstrap for Accuracy Estimation and Model Selection , 1995, IJCAI.

[36]  Igor Kononenko,et al.  Estimating Attributes: Analysis and Extensions of RELIEF , 1994, ECML.

[37]  Robert M. Haralick,et al.  Textural Features for Image Classification , 1973, IEEE Trans. Syst. Man Cybern..

[38]  Marcin Blachnik,et al.  Ensembles of Instance Selection Methods based on Feature Subset , 2014, KES.

[39]  Nitesh V. Chawla,et al.  Data Mining for Imbalanced Datasets: An Overview , 2005, The Data Mining and Knowledge Discovery Handbook.

[40]  Enrico Blanzieri,et al.  A multiple classifier system for early melanoma diagnosis , 2003, Artif. Intell. Medicine.

[41]  Paul Scheunders,et al.  Wavelet-based Texture Analysis , 1998 .