Proteomics of organelles and large cellular structures
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[1] International Human Genome Sequencing Consortium. Initial sequencing and analysis of the human genome , 2001, Nature.
[2] B. Barrell,et al. Life with 6000 Genes , 1996, Science.
[3] J. Berg. Genome sequence of the nematode C. elegans: a platform for investigating biology. , 1998, Science.
[4] C. Usal,et al. Presentation of donor major histocompatibility complex antigens by bone marrow dendritic cell-derived exosomes modulates allograft rejection1 , 2003, Transplantation.
[5] Eoin Fahy,et al. Expanded coverage of the human heart mitochondrial proteome using multidimensional liquid chromatography coupled with tandem mass spectrometry. , 2004, Journal of proteome research.
[6] Andrew Smith. Genome sequence of the nematode C-elegans: A platform for investigating biology , 1998 .
[7] M. Stack,et al. Membrane protease proteomics: Isotope-coded affinity tag MS identification of undescribed MT1-matrix metalloproteinase substrates. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[8] J. Yates. Mass spectral analysis in proteomics. , 2004, Annual review of biophysics and biomolecular structure.
[9] M. Desjardins,et al. Proteomic analysis reveals a role for protein kinase C-α in phagosome maturation , 2004 .
[10] J. Yates,et al. Dissection of the Mammalian Midbody Proteome Reveals Conserved Cytokinesis Mechanisms , 2004, Science.
[11] T. Pawson,et al. Proteomic, Functional, and Domain-Based Analysis of In Vivo 14-3-3 Binding Proteins Involved in Cytoskeletal Regulation and Cellular Organization , 2004, Current Biology.
[12] J. Yates,et al. Proteomics of rat liver Golgi complex: Minor proteins are identified through sequential fractionation , 2000, Electrophoresis.
[13] M. Mann,et al. Directed Proteomic Analysis of the Human Nucleolus , 2002, Current Biology.
[14] John R Yates,et al. Large-scale protein identification using mass spectrometry. , 2003, Biochimica et biophysica acta.
[15] F. Cross,et al. Accurate quantitation of protein expression and site-specific phosphorylation. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[16] J. Yates,et al. Identifying the major proteome components of Haemophilus influenzae type‐strain NCTC 8143 , 1997, Electrophoresis.
[17] Stephen M. Mount,et al. The genome sequence of Drosophila melanogaster. , 2000, Science.
[18] P. McPherson,et al. Two WXXF‐based motifs in NECAPs define the specificity of accessory protein binding to AP‐1 and AP‐2 , 2004, The EMBO journal.
[19] D. Hochstrasser,et al. Extraction of membrane proteins by differential solubilization for separation using two‐dimensional gel electrophoresis , 1998, Electrophoresis.
[20] C. Barlowe,et al. Role of Erv29p in Collecting Soluble Secretory Proteins into ER-Derived Transport Vesicles , 2001, Science.
[21] C. Watanabe,et al. Identifying proteins from two-dimensional gels by molecular mass searching of peptide fragments in protein sequence databases. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[22] Alexander W Bell,et al. Enthoprotin: a novel clathrin-associated protein identified through subcellular proteomics. , 2002, The Journal of cell biology.
[23] Alexandre V. Podtelejnikov,et al. Proteomic Mapping of Brain Plasma Membrane Proteins*S , 2005, Molecular & Cellular Proteomics.
[24] T. Hunkapiller,et al. Peptide mass maps: a highly informative approach to protein identification. , 1993, Analytical biochemistry.
[25] A. Stensballe,et al. Phosphoproteomics of the Arabidopsis Plasma Membrane and a New Phosphorylation Site Databasew⃞ , 2004, The Plant Cell Online.
[26] H. Debuch,et al. The isolation of lysosomes from normal rat liver by affinity chromatography. , 1984, Hoppe-Seyler's Zeitschrift fur physiologische Chemie.
[27] M. White,et al. Affinity enrichment of plasma membrane for proteomics analysis , 2003, Electrophoresis.
[28] D. Morrison,et al. Unlocking the code of 14-3-3 , 2004, Journal of Cell Science.
[29] S. Grant,et al. Proteomic analysis of NMDA receptor–adhesion protein signaling complexes , 2000, Nature Neuroscience.
[30] E. O’Shea,et al. Global analysis of protein localization in budding yeast , 2003, Nature.
[31] Mouse Genome Sequencing Consortium. Initial sequencing and comparative analysis of the mouse genome , 2002, Nature.
[32] Etienne Gagnon,et al. The Phagosome Proteome: Insight into Phagosome Functions , 2001 .
[33] John R Yates,et al. Nuclear Membrane Proteins with Potential Disease Links Found by Subtractive Proteomics , 2003, Science.
[34] J. Yates,et al. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. , 2004, Analytical chemistry.
[35] John R Yates,et al. Mass spectrometry as an emerging tool for systems biology. , 2004, BioTechniques.
[36] A. Novikoff,et al. GOLGI APPARATUS AND LYSOSOMES. , 1964, Federation proceedings.
[37] Erich A Nigg,et al. Phosphoproteome analysis of the human mitotic spindle. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[38] Eric S. Lander,et al. Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[39] Bradford W. Gibson,et al. Characterization of the human heart mitochondrial proteome , 2003, Nature Biotechnology.
[40] E. Lander,et al. Finishing the euchromatic sequence of the human genome , 2004 .
[41] David E. Misek,et al. Global Profiling of the Cell Surface Proteome of Cancer Cells Uncovers an Abundance of Proteins with Chaperone Function* , 2003, The Journal of Biological Chemistry.
[42] K. Howell,et al. Immuno‐isolation of a plasma membrane fraction from the Fao cell. , 1985, The EMBO journal.
[43] David L. Tabb,et al. A proteomic view of the Plasmodium falciparum life cycle , 2002, Nature.
[44] G. Griffiths,et al. Phagocytosis: latex leads the way. , 2003, Current opinion in cell biology.
[45] Ruedi Aebersold,et al. Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane , 2004, The Journal of cell biology.
[46] J. Leszyk,et al. Proteomic Analysis of a Detergent-resistant Membrane Skeleton from Neutrophil Plasma Membranes* 210 , 2002, The Journal of Biological Chemistry.
[47] B. Chait,et al. The Yeast Nuclear Pore Complex: Composition, Architecture, and Transport Mechanism , 2000 .
[48] S. Munro. Lipid Rafts Elusive or Illusive? , 2003, Cell.
[49] Laurence Zitvogel,et al. Eradication of established murine tumors using a novel cell-free vaccine: dendritic cell derived exosomes , 1998, Nature Medicine.
[50] D. Mccormick. Sequence the Human Genome , 1986, Bio/Technology.
[51] Rovshan G Sadygov,et al. Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book , 2004, Nature Methods.
[52] A. Amar‐Costesec,et al. ANALYTICAL STUDY OF MICROSOMES AND ISOLATED SUBCELLULAR MEMBRANES FROM RAT LIVER , 1974, The Journal of cell biology.
[53] J. Yates,et al. Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level. , 1997, Analytical chemistry.
[54] John R Yates,et al. Proteome analysis of rhoptry-enriched fractions isolated from Plasmodium merozoites. , 2004, Journal of proteome research.
[55] Etienne Gagnon,et al. Phagosomes are competent organelles for antigen cross-presentation , 2003, Nature.
[56] Rong-Fong Shen,et al. Identification and proteomic profiling of exosomes in human urine. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[57] Yan Li,et al. Subtractive proteomic mapping of the endothelial surface in lung and solid tumours for tissue-specific therapy , 2004, Nature.
[58] Nan Zhang,et al. Lipid raft proteomics: Analysis of in‐solution digest of sodium dodecyl sulfate‐solubilized lipid raft proteins by liquid chromatography‐matrix‐assisted laser desorption/ionization tandem mass spectrometry , 2004, Proteomics.
[59] J. Yates,et al. Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis. , 2004, Analytical chemistry.
[60] David Curtis,et al. The Epsin 4 gene on chromosome 5q, which encodes the clathrin-associated protein enthoprotin, is involved in the genetic susceptibility to schizophrenia. , 2005, American journal of human genetics.
[61] Satoshi Yasuda,et al. Molecular machinery for non-vesicular trafficking of ceramide , 2003, Nature.
[62] J. Yates,et al. Direct analysis of protein complexes using mass spectrometry , 1999, Nature Biotechnology.
[63] J. Yates,et al. Large-scale analysis of the yeast proteome by multidimensional protein identification technology , 2001, Nature Biotechnology.
[64] B. Chait,et al. Proteomic analysis of the mammalian nuclear pore complex , 2002, The Journal of cell biology.
[65] H. Hauri,et al. Proteomics of Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Membranes from Brefeldin A-treated HepG2 Cells Identifies ERGIC-32, a New Cycling Protein That Interacts with Human Erv46* , 2004, Journal of Biological Chemistry.
[66] J R Yates,et al. Database searching using mass spectrometry data , 1998, Electrophoresis.
[67] S. Gygi,et al. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags , 1999, Nature Biotechnology.
[68] Joachim Klose,et al. Two‐dimensional electrophoresis of proteins: An updated protocol and implications for a functional analysis of the genome , 1995, Electrophoresis.
[69] P. Selby,et al. Proteomic analysis of melanoma‐derived exosomes by two‐dimensional polyacrylamide gel electrophoresis and mass spectrometry , 2004, Proteomics.
[70] Lisa M. D'Souza,et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution , 2004, Nature.
[71] L. Hermo,et al. Ultrastructural distribution of NADPase within the Golgi apparatus and lysosomes of mammalian cells. , 1990, Progress in histochemistry and cytochemistry.
[72] J. Bonfield,et al. Finishing the euchromatic sequence of the human genome , 2004, Nature.
[73] J. Yates,et al. An automated multidimensional protein identification technology for shotgun proteomics. , 2001, Analytical chemistry.
[74] Steven P Gygi,et al. Large-scale characterization of HeLa cell nuclear phosphoproteins. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[75] Albert Sickmann,et al. The proteome of Saccharomyces cerevisiae mitochondria , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[76] Marjan S. Bolouri,et al. Integrated Analysis of Protein Composition, Tissue Diversity, and Gene Regulation in Mouse Mitochondria , 2003, Cell.
[77] Etienne Gagnon,et al. Organelle proteomics: looking at less to see more. , 2003, Trends in cell biology.
[78] M. Mann,et al. Unbiased quantitative proteomics of lipid rafts reveals high specificity for signaling factors , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[79] Roberto Raggiaschi,et al. Extensive temporally regulated reorganization of the lipid raft proteome following T-cell antigen receptor triggering. , 2003, The Biochemical journal.
[80] J. Garin,et al. Proteomics of the Chloroplast Envelope Membranes from Arabidopsis thaliana*S , 2003, Molecular & Cellular Proteomics.
[81] G. Gonnet,et al. Protein identification by mass profile fingerprinting. , 1993, Biochemical and biophysical research communications.
[82] A. Gooley,et al. Proteomic analysis of the Escherichia coli outer membrane. , 2000, European journal of biochemistry.
[83] Richard D. Bagshaw,et al. A Proteomic Analysis of Lysosomal Integral Membrane Proteins Reveals the Diverse Composition of the Organelle*S , 2005, Molecular & Cellular Proteomics.
[84] R. Wait,et al. Fluorescence two‐dimensional difference gel electrophoresis and mass spectrometry based proteomic analysis of Escherichia coli , 2002, Proteomics.
[85] Eberhard Durr,et al. Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture , 2004, Nature Biotechnology.
[86] P. McPherson,et al. Identification of a family of endocytic proteins that define a new α‐adaptin ear‐binding motif , 2003 .
[87] P. Højrup,et al. Rapid identification of proteins by peptide-mass fingerprinting , 1993, Current Biology.
[88] Liang Li,et al. ERp19 and ERp46, New Members of the Thioredoxin Family of Endoplasmic Reticulum Proteins* , 2003, Molecular & Cellular Proteomics.
[89] J. Yates,et al. Proteomic Analysis of Two Functional States of the Golgi Complex in Mammary Epithelial Cells , 2000, Traffic.
[90] J. Garin,et al. Flotillin-1-enriched Lipid Raft Domains Accumulate on Maturing Phagosomes* , 2001, The Journal of Biological Chemistry.
[91] Jyoti S. Choudhary,et al. Proteomics Characterization of Abundant Golgi Membrane Proteins* , 2001, The Journal of Biological Chemistry.
[92] K. Howell,et al. GMx33: A Novel Family of trans‐Golgi Proteins Identified by Proteomics , 2000, Traffic.
[93] David N. Mastronarde,et al. Golgi Structure in Three Dimensions: Functional Insights from the Normal Rat Kidney Cell , 1999, The Journal of cell biology.
[94] M. Desjardins,et al. ER-mediated phagocytosis: a new membrane for new functions , 2003, Nature Reviews Immunology.
[95] M. Mann,et al. Proteomic characterization of the human centrosome by protein correlation profiling , 2003, Nature.
[96] P. Højrup,et al. Use of mass spectrometric molecular weight information to identify proteins in sequence databases. , 1993, Biological mass spectrometry.
[97] F. Faure,et al. Exosomes bearing HLA-G are released by melanoma cells. , 2003, Human immunology.
[98] J. Yates,et al. Organellar proteomics reveals Golgi arginine dimethylation. , 2004, Molecular biology of the cell.
[99] C. Melief,et al. B lymphocytes secrete antigen-presenting vesicles , 1996, The Journal of experimental medicine.
[100] Etienne Gagnon,et al. Endoplasmic Reticulum-Mediated Phagocytosis Is a Mechanism of Entry into Macrophages , 2002, Cell.
[101] J. Yates,et al. A method for the comprehensive proteomic analysis of membrane proteins , 2003, Nature Biotechnology.
[102] E. Feytmans,et al. ANALYTICAL STUDY OF MICROSOMES AND ISOLATED SUBCELLULAR MEMBRANES FROM RAT LIVER , 1974, The Journal of cell biology.
[103] Alexander W Bell,et al. Tandem MS analysis of brain clathrin-coated vesicles reveals their critical involvement in synaptic vesicle recycling. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[104] G. Moorhead,et al. Large-scale Identification of Tubulin-binding Proteins Provides Insight on Subcellular Trafficking, Metabolic Channeling, and Signaling in Plant Cells*S , 2004, Molecular & Cellular Proteomics.
[105] Ronald J. Moore,et al. Integrative Analysis of the Mitochondrial Proteome in Yeast , 2004, PLoS biology.
[106] J. Yates,et al. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database , 1994, Journal of the American Society for Mass Spectrometry.
[107] Anthony K. L. Leung,et al. Nucleolar proteome dynamics , 2005, Nature.
[108] Laurence Zitvogel,et al. Exosomes: composition, biogenesis and function , 2002, Nature Reviews Immunology.
[109] Ronald J. Moore,et al. Enrichment of integral membrane proteins for proteomic analysis using liquid chromatography-tandem mass spectrometry. , 2002, Journal of proteome research.