DNA bending by an adenine–thymine tract and its role in gene regulation
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H. Rozenberg | D. Rabinovich | Z. Shakked | F. Frolow | F Frolow | D Rabinovich | Z Shakked | J Hizver | H Rozenberg | Jenny Hizver
[1] S. Grossman,et al. Crystal structure at 1.7 Å of the bovine papillomavirus-1 E2 DMA-binding domain bound to its DNA target , 1992, Nature.
[2] M Eisenstein,et al. X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature. , 1997, Journal of molecular biology.
[3] R Lavery,et al. The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids. , 1988, Journal of biomolecular structure & dynamics.
[4] R. Hegde,et al. The Structural Basis of DNA Target Discrimination by Papillomavirus E2 Proteins* , 2000, The Journal of Biological Chemistry.
[5] G G Hu,et al. The B-DNA dodecamer at high resolution reveals a spine of water on sodium. , 1998, Biochemistry.
[6] A. Clarke,et al. DNA Binding and Bending by the Human Papillomavirus Type 16 E2 Protein , 1997, The Journal of Biological Chemistry.
[7] R. Dickerson,et al. DNA bending: the prevalence of kinkiness and the virtues of normality. , 1998, Nucleic acids research.
[8] P. Howley,et al. The papillomavirus E2 regulatory proteins. , 1991, The Journal of biological chemistry.
[9] A. Nadra,et al. Distinctive cognate sequence discrimination, bound DNA conformation, and binding modes in the E2 C-terminal domains from prototype human and bovine papillomaviruses. , 2000, Biochemistry.
[10] D. VanDerveer,et al. Cations Mediate B-DNA Conformational Heterogeneity† , 2000 .
[11] Phoebe A Rice,et al. Crystal Structure of an IHF-DNA Complex: A Protein-Induced DNA U-Turn , 1996, Cell.
[12] D. Lilley,et al. DNA-protein: structural interactions , 1995 .
[13] J. Zou,et al. Improved methods for building protein models in electron density maps and the location of errors in these models. , 1991, Acta crystallographica. Section A, Foundations of crystallography.
[14] H R Drew,et al. Structure of a B-DNA dodecamer. II. Influence of base sequence on helix structure. , 1981, Journal of molecular biology.
[15] D. Bastia,et al. The DNA-binding domain of HPV-16 E2 protein interaction with the viral enhancer: protein-induced DNA bending and role of the nonconserved core sequence in binding site affinity. , 1990, Virology.
[16] Z. Otwinowski,et al. [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.
[17] Struther Arnott,et al. The structure of B-DNA in oriented fibers. , 1996, Journal of biomolecular structure & dynamics.
[18] S K Burley,et al. Crystal structure of a human TATA box-binding protein/TATA element complex. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[19] H. Berman,et al. New parameters for the refinement of nucleic acid-containing structures. , 1996, Acta crystallographica. Section D, Biological crystallography.
[20] D M Crothers,et al. Intrinsically bent DNA. , 1990, The Journal of biological chemistry.
[21] D. Goodsell,et al. Bending and curvature calculations in B-DNA. , 1994, Nucleic acids research.
[22] H. Rozenberg,et al. Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[23] G. Parkinson,et al. A new crystal form for the dodecamer C-G-C-G-A-A-T-T-C-G-C-G: symmetry effects on sequence-dependent DNA structure. , 2000, Journal of molecular biology.
[24] D. Rabinovich,et al. A new approach to structure determination of large molecules by multi-dimensional search methods , 1984 .
[25] M. Botchan,et al. Specific recognition nucleotides and their DNA context determine the affinity of E2 protein for 17 binding sites in the BPV-1 genome. , 1989, Genes & development.
[26] J. A. Subirana,et al. Structure of d(CGCGAATTCGCG) in the Presence of Ca2+Ions* , 1999, The Journal of Biological Chemistry.
[27] P. Hagerman,et al. Sequence-directed curvature of DNA. , 1986, Nature.
[28] W. Olson,et al. Resolving the discrepancies among nucleic acid conformational analyses. , 1999, Journal of molecular biology.
[29] D. Crothers,et al. DNA bend direction by phase sensitive detection , 1987, Nature.
[30] M. Egli,et al. Atomic-resolution crystal structures of B-DNA reveal specific influences of divalent metal ions on conformation and packing. , 1999, Journal of molecular biology.
[31] L. Malinina,et al. Water and Ions in a High Resolution Structure of B-DNA* , 1999, Journal of Biological Chemistry.
[32] H M Berman,et al. Crystal studies of B-DNA: the answers and the questions. , 1997, Biopolymers.
[33] S. Neidle. Oxford handbook of nucleic acid structure , 1998 .
[34] Harald zur Hausen,et al. Papillomavirus infections — a major cause of human cancers , 1996 .
[35] S. Harrison,et al. The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites. , 1993, Structure.
[36] Axel T. Brunger,et al. X-PLOR Version 3.1: A System for X-ray Crystallography and NMR , 1992 .
[37] D. VanDerveer,et al. Structure of the potassium form of CGCGAATTCGCG: DNA deformation by electrostatic collapse around inorganic cations. , 1998, Biochemistry.
[38] M. Brenowitz,et al. DNA structure and flexibility in the sequence-specific binding of papillomavirus E2 proteins. , 1998, Journal of molecular biology.
[39] D. Rabinovich,et al. Molecular replacement: the revival of the molecular Fourier transform method. , 1998, Acta crystallographica. Section D, Biological crystallography.
[40] B. Matthews,et al. How Cro and lambda-repressor distinguish between operators: the structural basis underlying a genetic switch. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[41] M. Yaniv,et al. E2 proteins: modulators of papillomavirus transcription and replication. , 1996, Methods in Enzymology.
[42] G. Sheldrick,et al. SHELXL: high-resolution refinement. , 1997, Methods in enzymology.