Multiple sclerosis: Genomic rewards

A large body of immunologic, epidemiologic, and genetic data indicate that tissue injury in multiple sclerosis (MS) results from an abnormal immune response to one or more myelin antigens that develops in genetically susceptible individuals after exposure to an as-yet undefined causal agent. The genetic component of MS etiology is believed to result from the action of several genes of moderate effect. The incomplete penetrance of MS susceptibility alleles probably reflects interactions with other genes, post transcriptional regulatory mechanisms, and significant nutritional and environmental influences. Equally significant, it is also likely that genetic heterogeneity exists, meaning that specific genes influence susceptibility and pathogenesis in some affects but not in others. Results in multiplex MS families confirm the genetic importance of the MHC region in conferring susceptibility of MS. Susceptibility may be mediated by the class II genes themselves (DR, DQ or both), related to the known function of these molecules in the normal immune response, e.g. antigen binding and presentation and T cell repertoire determination. The possibility that other genes in the MHC or the telomeric region of the MHC are responsible for the observed genetic effect cannot be excluded. The data also indicate that although the MHC region plays a significant role in MS susceptibility, much of the genetic effect in MS remains to be explained. Some loci may be involved in the initial pathogenic events, while others could influence the development and progression of the disease. The past few years have seen real progress in the development of laboratory and analytical approaches to study non-Mendelian complex genetic disorders and in defining the pathological basis of demyelination, setting the stage for the final characterization of the genes involved in MS susceptibility and pathogenesis. Their identification and characterization is likely to define the basic etiology of the disease, improve risk assessment and influence therapeutics.

[1]  C. Martyn,et al.  Migrant studies in multiple sclerosis , 1995, Progress in Neurobiology.

[2]  J. Hillert,et al.  HLA‐DR15 is associated with lower age at onset in multiple sclerosis , 2000, Annals of neurology.

[3]  J. Haines,et al.  CC-chemokine receptor 5 polymorphism and age of onset in familial multiple sclerosis , 2000, Immunogenetics.

[4]  L. Steinman,et al.  Perivascular T Cells Express the Pro‐Inflammatory Chemokine RANTES mRNA in Multiple Sclerosis Lesions , 1997, Scandinavian journal of immunology.

[5]  S. Cook,et al.  Cytokine secretion profile of myelin basic protein-specific T cells in multiple sclerosis , 2000, Multiple sclerosis.

[6]  F. Nicoletti,et al.  Blood levels of transforming growth factor‐beta 1 (TGF‐β1) are elevated in both relapsing remitting and chronic progressive multiple sclerosis (MS) patients and are further augmented by treatment with interferon‐beta 1b (IFN‐β1b) , 1998, Clinical and experimental immunology.

[7]  S. Hauser,et al.  Late Complications of Immune Deviation Therapy in a Nonhuman Primate , 1996, Science.

[8]  J. Eisman,et al.  Molecular mechanism of vitamin D receptor action , 1998, Inflammation Research.

[9]  James M. Sikela,et al.  Single pass sequencing and physical and genetic mapping of human brain cDNAs , 1992, Nature Genetics.

[10]  Leonid Kruglyak,et al.  The use of a genetic map of biallelic markers in linkage studies , 1997, Nature Genetics.

[11]  Genetic Polymorphisms and Susceptibility to Disease , 2000 .

[12]  A. Evans,et al.  Induction of a non-encephalitogenic type 2 T helper-cell autoimmune response in multiple sclerosis after administration of an altered peptide ligand in a placebo-controlled, randomized phase II trial , 2000, Nature Medicine.

[13]  H. Weiner,et al.  CCR5(+) and CXCR3(+) T cells are increased in multiple sclerosis and their ligands MIP-1alpha and IP-10 are expressed in demyelinating brain lesions. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[14]  S. Sawcer,et al.  Linkage and association analysis of susceptibility regions on chromosomes 5 and 6 in 106 Scandinavian sibling pair families with multiple sclerosis , 1999, Annals of neurology.

[15]  G. Lathrop,et al.  Multiple loci for multiple sclerosis , 1996, Nature Genetics.

[16]  L. Steinman,et al.  The role of TNFα and lymphotoxin in demyelinating disease , 1999 .

[17]  H. DeLuca,et al.  1,25-Dihydroxyvitamin D3 reversibly blocks the progression of relapsing encephalomyelitis, a model of multiple sclerosis. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[18]  M. Relling,et al.  Pharmacogenomics: translating functional genomics into rational therapeutics. , 1999, Science.

[19]  Don C. Wiley,et al.  Crystal Structure of HLA-DR2 (DRA*0101, DRB1*1501) Complexed with a Peptide from Human Myelin Basic Protein , 1998, The Journal of experimental medicine.

[20]  C. Raine,et al.  The adhesion molecule and cytokine profile of multiple sclerosis lesions , 1995, Annals of neurology.

[21]  D. Paty,et al.  A population‐based study of multiple sclerosis in twins: Update , 1993 .

[22]  O. Paulson,et al.  Apoliprotein E and multiple sclerosis: impact of the epsilon-4 allele on susceptibility, clinical type and progression rate , 2000, Multiple sclerosis.

[23]  D. Schaid,et al.  Genetic variation in the tumor necrosis factor alpha gene and the outcome of multiple sclerosis , 1997, Neurology.

[24]  J. Kurtzke,et al.  Multiple sclerosis in the Faroe Islands: an epitome. , 2001, Journal of clinical epidemiology.

[25]  D. A. Baxter,et al.  Mathematical Modeling of Gene Networks , 2000, Neuron.

[26]  V. Martinelli,et al.  Relevance of interleukin 1 receptor antagonist intron 2 polymorphism in Italian MS patients , 1999, Neurology.

[27]  A. Rogers,et al.  HLA DR15 (DR2) and DQB1*0602 typing studies in 188 narcoleptic patients with cataplexy , 1997, Neurology.

[28]  D. Taub,et al.  Chemokine and matrix metalloproteinase secretion by myelin proteolipid protein-specific CD8+ T cells: potential roles in inflammation. , 1997, Journal of immunology.

[29]  A. Compston Genetic epidemiology of multiple sclerosis. , 1997, Journal of neurology, neurosurgery, and psychiatry.

[30]  S. Hauser,et al.  Cytokine accumulations in CSF of multiple sclerosis patients , 1990, Neurology.

[31]  C. Raine,et al.  Multiple sclerosis: expression of molecules of the tumor necrosis factor ligand and receptor families in relationship to the demyelinated plaque. , 1998, Revue neurologique.

[32]  E. Granieri,et al.  Common childhood and adolescent infections and multiple sclerosis , 1997, Neurology.

[33]  L Gauthier,et al.  Expression and crystallization of the complex of HLA-DR2 (DRA, DRB1*1501) and an immunodominant peptide of human myelin basic protein. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[34]  N Risch,et al.  The relative power of family-based and case-control designs for linkage disequilibrium studies of complex human diseases I. DNA pooling. , 1998, Genome research.

[35]  J. Trent,et al.  Clustering of non-major histocompatibility complex susceptibility candidate loci in human autoimmune diseases. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[36]  I. Milanov,et al.  Prevalence of Multiple Sclerosis in Gypsies and Bulgarians , 1999, Neuroepidemiology.

[37]  A. Stenbit,et al.  Cardiac and adipose tissue abnormalities but not diabetes in mice deficient in GLUT4 , 1995, Nature.

[38]  Finn Sellebjerg,et al.  CCR5 Δ32, matrix metalloproteinase-9 and disease activity in multiple sclerosis , 2000, Journal of Neuroimmunology.

[39]  K. Lauer The risk of multiple sclerosis in the U.S.A. in relation to sociogeographic features: a factor-analytic study. , 1994, Journal of clinical epidemiology.

[40]  K. Kinzler,et al.  Serial Analysis of Gene Expression , 1995, Science.

[41]  W. Ewens,et al.  A sibship test for linkage in the presence of association: the sib transmission/disequilibrium test. , 1998, American journal of human genetics.

[42]  P. Kourilsky,et al.  The pattern of production of cytokine mRNAs is markedly altered at the onset of multiple sclerosis. , 1996, Research in immunology.

[43]  Howard L. Weiner,et al.  Inheritance of susceptibility to experimental autoimmune encephalomyelitis , 1996, Journal of neuroscience research.

[44]  Tom H. Lindner,et al.  Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus , 2000, Nature Genetics.

[45]  Jakob S. Jensen,et al.  Expression of specific chemokines and chemokine receptors in the central nervous system of multiple sclerosis patients. , 1999, The Journal of clinical investigation.

[46]  C. Stratton,et al.  Multiple sclerosis associated with Chlamydia pneumoniae infection of the CNS , 1998, Neurology.

[47]  Russell Higuchi,et al.  Kinetic PCR Analysis: Real-time Monitoring of DNA Amplification Reactions , 1993, Bio/Technology.

[48]  B. Weinshenker,et al.  The epidemiology of multiple sclerosis. , 1997, Mayo Clinic proceedings.

[49]  J. Trent,et al.  Analysis of gene expression in multiple sclerosis lesions using cDNA microarrays , 1999 .

[50]  J. Gilbert,et al.  Analysis of association at single nucleotide polymorphisms in the APOE region. , 2000, Genomics.

[51]  M. Mann,et al.  Proteomics to study genes and genomes , 2000, Nature.

[52]  P. Goodfellow,et al.  The genetics of multiple sclerosis: principles, background and updated results of the United Kingdom systematic genome screen. , 1998, Brain : a journal of neurology.

[53]  W. Klitz,et al.  Polymorphism, recombination, and linkage disequilibrium within the HLA class II region. , 1992, Journal of immunology.

[54]  W. Ewens,et al.  Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM). , 1993, American journal of human genetics.

[55]  R. Rosenberg The Molecular and Genetic Basis of Neurological Disease , 1997 .

[56]  A. Sadovnick,et al.  The role of genetic factors in multiple sclerosis susceptibility , 1994, Journal of Neuroimmunology.

[57]  H. Harbo,et al.  Sex and age at diagnosis are correlated with the HLA-DR2, DQ6 haplotype in multiple sclerosis , 2000, Journal of the Neurological Sciences.

[58]  K. Lauer Diet and multiple sclerosis , 1997, Neurology.

[59]  Link,et al.  IL‐15 mRNA expression is up‐regulated in blood and cerebrospinal fluid mononuclear cells in multiple sclerosis (MS) , 1998, Clinical and experimental immunology.

[60]  A. Dalgleish Viruses and multiple sclerosis , 1997, Acta neurologica Scandinavica. Supplementum.

[61]  M J Malloy,et al.  A multilocus genotyping assay for candidate markers of cardiovascular disease risk. , 1999, Genome research.

[62]  P. Brown,et al.  Parallel human genome analysis: microarray-based expression monitoring of 1000 genes. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[63]  W. Klitz,et al.  Association mapping of disease loci, by use of a pooled DNA genomic screen. , 1997, American journal of human genetics.

[64]  Rithy K. Roth,et al.  Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays , 2000, Nature Biotechnology.

[65]  M. Daly,et al.  Genomewide scan of multiple sclerosis in Finnish multiplex families. , 1997, American journal of human genetics.

[66]  H. Erlich,et al.  Association of susceptibility to multiple sclerosis in Sweden with HLA class II DRB1 and DQB1 alleles. , 1994, Human immunology.

[67]  K. Miyasaka,et al.  CTLA-4 gene polymorphism may modulate disease in Japanese multiple sclerosis patients , 1999, Journal of the Neurological Sciences.

[68]  C. Gale,et al.  The epidemiology of multiple sclerosis , 1997, Acta neurologica Scandinavica. Supplementum.

[69]  Eric S. Lander,et al.  Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse , 2000, Nature Genetics.

[70]  P. Calabresi,et al.  Association of human herpes virus 6 (HHV-6) with multiple sclerosis: Increased IgM response to HHV-6 early antigen and detection of serum HHV-6 DNA , 1997, Nature Medicine.

[71]  J. Kurtzke,et al.  Epidemiology of MS , 1991, Neurology.

[72]  A. Sadovnick,et al.  Association studies in multiple sclerosis , 1994, Journal of Neuroimmunology.

[73]  J. Haines,et al.  A complete genomic screen for multiple sclerosis underscores a role for the major histocompatability complex , 1996, Nature Genetics.

[74]  J. Hillert,et al.  Cytokine analysis in multiple sclerosis by competitive RT - PCR: A decreased expression of IL-10 and an increased expression of TNF-α in chronic progression , 1999, Multiple sclerosis.

[75]  F. Barkhof,et al.  Decreased interleukin‐10 and increased interleukin‐12p40 mRNA are associated with disease activity and characterize different disease stages in multiple sclerosis , 1999, Annals of neurology.

[76]  J. Kurtzke,et al.  Multiple sclerosis in the faroe islands: I. Clinical and epidemiological features , 1979, Annals of neurology.

[77]  L. Kappos,et al.  Balancing the Th1/Th2 concept in multiple sclerosis. , 1998, Immunology today.

[78]  J. Haines,et al.  Linkage of the MHC to familial multiple sclerosis suggests genetic heterogeneity. The Multiple Sclerosis Genetics Group. , 1998, Human molecular genetics.

[79]  R. Papais-Alvarenga,et al.  DQB1*0602 confers genetic susceptibility to multiple sclerosis in Afro-Brazilians. , 1999, Tissue antigens.

[80]  N. Risch,et al.  A genetic basis for familial aggregation in multiple sclerosis , 1995, Nature.

[81]  J. Kurtzke,et al.  On the Risk of Multiple Sclerosis According to Age at Immigration to South Africa* , 1971, British medical journal.

[82]  N. Risch Corrections to "Linkage strategies for genetically complex traits. III. The effect of marker polymorphism on analysis of affected relative pairs". , 1992, American journal of human genetics.

[83]  M. Huberman,et al.  Decreased IL-3 production by peripheral blood mononuclear cells in patients with multiple sclerosis , 1993, Journal of the Neurological Sciences.

[84]  K. Wessel,et al.  Diminished production of type-I interferons and interleukin-2 in patients with multiple sclerosis , 1997, Journal of the Neurological Sciences.

[85]  J. Hillert,et al.  HLA class II-associated genetic susceptibility in multiple sclerosis: a critical evaluation. , 1991, Tissue antigens.

[86]  J. Kesselring,et al.  Multiple Sclerosis and Infectious Childhood Diseases , 1998, Neuroepidemiology.

[87]  D. Hinds,et al.  A full genome search in multiple sclerosis , 1996, Nature Genetics.

[88]  P. Goodfellow,et al.  A genome screen in multiple sclerosis reveals susceptibility loci on chromosome 6p21 and 17q22 , 1996, Nature Genetics.

[89]  H. McAdams,et al.  Circuit simulation of genetic networks. , 1995, Science.

[90]  A. Walczak,et al.  Shedding of TNF receptors in multiple sclerosis patients. , 1999, Neurology.

[91]  N. Risch,et al.  Linkage strategies for genetically complex traits. III. The effect of marker polymorphism on analysis of affected relative pairs. , 1990, American journal of human genetics.

[92]  S. Germer,et al.  High-throughput SNP allele-frequency determination in pooled DNA samples by kinetic PCR. , 2000, Genome research.

[93]  S Fuhrman,et al.  Reveal, a general reverse engineering algorithm for inference of genetic network architectures. , 1998, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing.

[94]  R. W. Davis,et al.  Discovery and analysis of inflammatory disease-related genes using cDNA microarrays. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[95]  A. Santoni,et al.  Vitamin D3: a transcriptional modulator of the interferon‐γ gene , 1998 .

[96]  J. Herbert,et al.  High prevalence of vitamin D deficiency and reduced bone mass in multiple sclerosis , 1994, Neurology.

[97]  M. Alter,et al.  Risk of multiple sclerosis related to age at immigration to Israel. , 1966, Archives of neurology.

[98]  R. Doerge,et al.  Identification of genetic loci controlling the characteristics and severity of brain and spinal cord lesions in experimental allergic encephalomyelitis. , 2000, The American journal of pathology.

[99]  K. Miyasaka,et al.  Association of vitamin D receptor gene polymorphism with multiple sclerosis in Japanese , 1999, Journal of the Neurological Sciences.

[100]  Gen Tamiya,et al.  Complete sequence and gene map of a human major histocompatibility complex , 1999 .

[101]  M. Carrington,et al.  Genetics of HIV-1 infection: chemokine receptor CCR5 polymorphism and its consequences. , 1999, Human molecular genetics.

[102]  P. Sminia,et al.  Expression of transforming growth factor (TGF)-beta1, -beta2, and -beta3 isoforms and TGF-beta type I and type II receptors in multiple sclerosis lesions and human adult astrocyte cultures. , 1999, Journal of neuropathology and experimental neurology.

[103]  S. Hauser,et al.  Genetics of Demyelinating Diseases , 1996, Brain pathology.

[104]  H. Link,et al.  Multiple sclerosis is associated with high levels of circulating dendritic cells secreting pro-inflammatory cytokines , 1999, Journal of Neuroimmunology.

[105]  P. Kivisäkk,et al.  Interleukin-17 mRNA expression in blood and CSF mononuclear cells is augmented in multiple sclerosis , 1999, Multiple sclerosis.

[106]  M. Kurimoto,et al.  Interferon-γ–inducing factor (IL-18) and interferon-γ in inflammatory CNS diseases , 1999, Neurology.

[107]  D. Miller,et al.  The British Isles survey of multiple sclerosis in twins , 1994, Neurology.

[108]  G. Dean,et al.  Multiple sclerosis among the United Kingdom-born children of immigrants from the West Indies. , 1987, Journal of neurology, neurosurgery, and psychiatry.

[109]  N. Risch,et al.  Evidence for genetic basis of multiple sclerosis , 1996, The Lancet.

[110]  J. Lanchbury,et al.  Meta‐analysis of genome searches , 1999, Annals of human genetics.

[111]  E. Thorsby,et al.  HLA-DQA1 and HLA-DQB1 genes may jointly determine susceptibility to develop multiple sclerosis. , 1991, Human immunology.

[112]  J. Herbert,et al.  Fracture history and bone loss in patients with MS , 1998, Neurology.

[113]  A. Steck,et al.  High‐grade B‐cell cerebral lymphoma in a patient with anti‐myelin‐associated glycoprotein IgM paraproteinemic neuropathy , 1995, Neurology.

[114]  K. Becker,et al.  Analysis of a sequenced cDNA library from multiple sclerosis lesions , 1997, Journal of Neuroimmunology.

[115]  L. Steinman Some Misconceptions about Understanding Autoimmunity through Experiments with Knockouts , 1997, The Journal of experimental medicine.

[116]  R. Strange,et al.  Polymorphisms of apolipoprotein E; outcome and susceptibility in multiple sclerosis , 2000, Multiple sclerosis.

[117]  M. Pericak-Vance,et al.  Linkage studies in familial Alzheimer disease: evidence for chromosome 19 linkage. , 1991, American journal of human genetics.

[118]  J. Haines,et al.  Linkage analysis of candidate myelin genes in familial multiple sclerosis , 1999, Neurogenetics.

[119]  Shozo Tobimatsu,et al.  Western versus asian types of multiple sclerosis: Immunogenetically and clinically distinct disorders , 1996, Annals of neurology.

[120]  M. Carrington,et al.  Chromosome 19 single-locus and multilocus haplotype associations with multiple sclerosis. Evidence of a new susceptibility locus in Caucasian and Chinese patients. , 1997 .

[121]  S. Shelburne,et al.  Multiple Sclerosis in Black Children , 1991, Journal of child neurology.

[122]  Ronald W. Davis,et al.  Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray , 1995, Science.

[123]  T. Olsson,et al.  Primarily chronic progressive and relapsing/remitting multiple sclerosis: two immunogenetically distinct disease entities. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[124]  K. Weiss,et al.  How many diseases does it take to map a gene with SNPs? , 2000, Nature Genetics.

[125]  D. Schaid,et al.  Major histocompatibility complex class II alleles and the course and outcome of MS , 1998, Neurology.

[126]  K. Wucherpfennig,et al.  Structural features of autoreactive TCR that determine the degree of degeneracy in peptide recognition. , 1999, Journal of immunology.

[127]  N. Risch,et al.  Genetic analysis of vitamin D related genes in Canadian multiple sclerosis patients , 2000, Neurology.

[128]  I. Weissman,et al.  Infection and multiple sclerosis: a possible role for superantigens? , 1994, Trends in microbiology.

[129]  D. Gambi,et al.  Linkage analysis of multiple sclerosis with candidate region markers in Sardinian and Continental Italian families , 1999, European Journal of Human Genetics.

[130]  N. Risch Searching for genetic determinants in the new millennium , 2000, Nature.

[131]  C. Polman,et al.  Association of interleukin-1β and interleukin-1 receptor antagonist genes with disease severity in MS , 1999, Neurology.

[132]  Chun Xu,et al.  Association and linkage analysis of candidate chromosomal regions in multiple sclerosis: indication of disease genes in 12q23 and 7ptr–15 , 1999, European Journal of Human Genetics.

[133]  C. Poser,et al.  Viking voyages: the origin of multiple sclerosis?: An essay in medical history , 1995, Acta neurologica Scandinavica. Supplementum.

[134]  S. Baranzini,et al.  Transcriptional Analysis of Multiple Sclerosis Brain Lesions Reveals a Complex Pattern of Cytokine Expression1 , 2000, The Journal of Immunology.

[135]  L. Steinman,et al.  Multiple sclerosis: a polygenic disease involving epistatic interactions, germline rearrangements and environmental effects , 1997, Neurogenetics.

[136]  D. Middleton,et al.  A study of the HLA-DR region in clinical subgroups of multiple sclerosis and its influence on prognosis , 1999, Journal of the Neurological Sciences.