FISH characterisation of an identical (16)(p11.2p12.2) tandem duplication in two unrelated patients with autistic behaviour

Partial trisomy 16p is a rare chromosomal anomaly in newborns: of the fewer than 30 carrier patients so far reported, most were born to parents with a balanced translocation involving the p arm of chromosome 16.1 Pure partial trisomy 16p has been reported in seven patients,2–6 three of whom (all showing behavioural problems with autistic traits) carried a tandem duplication of the (16)(p11.2–p12) region4,6; minor dysmorphisms were reported in only one patient.4 Linkage studies indicated chromosome 16p as a major location for autism susceptibility genes,7 while association was reported between autistic traits and attention deficit or hyperactivity disorders mapping to the 16p13 band.8 In addition TSC2, one of the genes responsible for tuberous sclerosis, a syndrome often associated with autistic traits, maps to the same cytogenetic band.9 We report the clinical phenotype and refined molecular cytogenetic characterisation of a patient carrying a (16)(p11.2p12.2) duplication. By extending the FISH analysis to a previously described patient with an apparently similar chromosomal rearrangement,6 we found that low copy repeats map to the 16p11.2 and 16p12.2 duplication endpoints, suggesting non-allelic homologous recombination as the pathogenetic mechanism. This finding is consistent with the non-random occurrence of the observed chromosomal rearrangement and the high frequency of segmental duplications identified throughout chromosome 16.10–12 We also inferred from genotype-phenotype correlation studies that genes involved in autism susceptibility are located within the duplicated region. Patient 1 is a 25 year old man, the first son of unrelated parents. At the time of his birth, his mother was aged 30 and his father 29 years. He was born at term with a weight of 2.550 kg (3rd centile). The father suffered from alcohol misuse and left the family when the patient was 12 years old. Because of …

[1]  C. Newschaffer,et al.  The Epidemiology of Autism and Autism Spectrum Disorders , 2004 .

[2]  L. Shaffer,et al.  Genome architecture catalyzes nonrecurrent chromosomal rearrangements. , 2003, American journal of human genetics.

[3]  L. Weiss,et al.  Sodium channels SCN1A, SCN2A and SCN3A in familial autism , 2003, Molecular Psychiatry.

[4]  C. Francks,et al.  Genetic linkage of attention-deficit/hyperactivity disorder on chromosome 16p13, in a region implicated in autism. , 2002, American journal of human genetics.

[5]  M. Tsurudome,et al.  Up-regulated expression of a novel gene in activated human peripheral blood mononuclear cells that is a truncated paralog of the human system L-amino acid transporter 1. , 2002, The international journal of biochemistry & cell biology.

[6]  G. Dawson,et al.  Defining the broader phenotype of autism: Genetic, brain, and behavioral perspectives , 2002, Development and Psychopathology.

[7]  M. Adams,et al.  Recent Segmental Duplications in the Human Genome , 2002, Science.

[8]  S. Tuinier,et al.  Duplication of chromosome region (16)(p11.2 --> p12.1) in a mother and daughter with mild mental retardation. , 2002, American journal of medical genetics.

[9]  E. Eichler,et al.  Divergent origins and concerted expansion of two segmental duplications on chromosome 16. , 2001, The Journal of heredity.

[10]  Evan E. Eichler,et al.  Positive selection of a gene family during the emergence of humans and African apes , 2001, Nature.

[11]  Stephen J. Guter,et al.  A genomewide screen for autism: strong evidence for linkage to chromosomes 2q, 7q, and 16p. , 2001, American journal of human genetics.

[12]  I. Medica,et al.  A case of insertional translocation resulting in partial trisomy 16p. , 2000, Annales de genetique.

[13]  M. Adams,et al.  Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. , 1999, Genomics.

[14]  M. Adams,et al.  A 12-Mb complete coverage BAC contig map in human chromosome 16p13.1-p11.2. , 1999, Genome research.

[15]  J. Lupski Genomic disorders: structural features of the genome can lead to DNA rearrangements and human disease traits. , 1998, Trends in genetics : TIG.

[16]  J. Cigudosa,et al.  De novo trisomy 16p. , 1997, American journal of medical genetics.

[17]  A Pickles,et al.  A broader phenotype of autism: the clinical spectrum in twins. , 1996, Journal of child psychology and psychiatry, and allied disciplines.

[18]  N. Archidiacono,et al.  A panel of subchromosomal painting libraries representing over 300 regions of the human genome. , 1995, Cytogenetics and cell genetics.

[19]  J. Hebebrand,et al.  Partial trisomy 16p in an adolescent with autistic disorder and Tourette's syndrome. , 1994, American journal of medical genetics.

[20]  J. Rabe-Jabłońska,et al.  [Affective disorders in the fourth edition of the classification of mental disorders prepared by the American Psychiatric Association -- diagnostic and statistical manual of mental disorders]. , 1993, Psychiatria polska.

[21]  R. Higgins,et al.  Trisomy 16p in a liveborn infant and review of trisomy 16p. , 1992, American journal of medical genetics.

[22]  P. Lichter,et al.  Chromosome analysis by non-isotopic in situ hybridization. , 1992 .

[23]  B. Leventhal,et al.  Autism and tuberous sclerosis , 1991, Journal of autism and developmental disorders.

[24]  G Hermanson,et al.  High-resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones. , 1990, Science.

[25]  M. Cohen,et al.  Duplication of 16p from insertion of 16p into 16q with subsequent duplication due to crossing over within the inserted segment. , 1983, American journal of medical genetics.

[26]  Iscn International System for Human Cytogenetic Nomenclature , 1978 .