The first holocomplex structure of ribonucleotide reductase gives new insight into its mechanism of action.
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Malin Uppsten | U. Uhlin | Mathias Färnegårdh | Vladimir Domkin | Ulla Uhlin | M. Färnegårdh | V. Domkin | M. Uppsten | M. Färnegårdh
[1] U. Uhlin,et al. Expression and preliminary crystallographic studies of R1E, the large subunit of ribonucleotide reductase from Salmonella typhimurium. , 2003, Acta crystallographica. Section D, Biological crystallography.
[2] Z. Otwinowski,et al. [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.
[3] J. Bollinger,et al. Interaction of C225SR1 mutant subunit of ribonucleotide reductase with R2 and nucleoside diphosphates: tales of a suicidal enzyme. , 1992, Biochemistry.
[4] É. Cohen,et al. Specific inhibition of herpesvirus ribonucleotide reductase by a nonapeptide derived from the carboxy terminus of subunit 2 , 1986, Nature.
[5] P. Reichard,et al. Binding of substrates to Escherichia coli ribonucleotide reductase. , 1976, The Journal of biological chemistry.
[6] U. Uhlin,et al. Structure of ribonucleotide reductase protein R1 , 1994, Nature.
[7] Hans Eklund,et al. Three-dimensional structure of the free radical protein of ribonucleotide reductase , 1990, Nature.
[8] A. Rosenzweig,et al. Structure of the yeast ribonucleotide reductase Y2Y4 heterodimer , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[9] S J Wodak,et al. SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model. , 1999, Acta crystallographica. Section D, Biological crystallography.
[10] J. Zou,et al. Improved methods for building protein models in electron density maps and the location of errors in these models. , 1991, Acta crystallographica. Section A, Foundations of crystallography.
[11] C. Chothia. Structural invariants in protein folding , 1975, Nature.
[12] B. Lee,et al. The interpretation of protein structures: estimation of static accessibility. , 1971, Journal of molecular biology.
[13] S. Wijmenga,et al. Yeast ribonucleotide reductase has a heterodimeric iron-radical-containing subunit. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[14] R. Fleischmann,et al. The Minimal Gene Complement of Mycoplasma genitalium , 1995, Science.
[15] M. Fontecave,et al. NMR studies of binding of 5-FdUDP and dCDP to ribonucleoside-diphosphate reductase from Escherichia coli. , 1995, Biochimica et biophysica acta.
[16] M. Sintchak,et al. The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer , 2002, Nature Structural Biology.
[17] L. Thelander. Reaction mechanism of ribonucleoside diphosphate reductase from Escherichia coli. Oxidation-reduction-active disulfides in the B1 subunit. , 1974, The Journal of biological chemistry.
[18] P. Reichard,et al. Role of effector binding in allosteric control of ribonucleoside diphosphate reductase. , 1969, Journal of molecular biology.
[19] S. Rakhit,et al. Specific inhibition of ribonucleotide reductases by peptides corresponding to the C-terminal of their second subunit. , 1991, Biochemistry and cell biology = Biochimie et biologie cellulaire.
[20] M. Eriksson,et al. Two Conserved Tyrosine Residues in Protein R1 Participate in an Intermolecular Electron Transfer in Ribonucleotide Reductase* , 1996, The Journal of Biological Chemistry.
[21] H. Eklund,et al. Glycyl radical enzymes: a conservative structural basis for radicals. , 1999, Structure.
[22] M. Eriksson,et al. Structure of Salmonella typhimurium nrdF ribonucleotide reductase in its oxidized and reduced forms. , 1998, Biochemistry.
[23] U. Uhlin,et al. Structure and function of the radical enzyme ribonucleotide reductase. , 2001, Progress in biophysics and molecular biology.
[24] B. Sjöberg,et al. The iron center in ribonucleotide reductase from Escherichia coli. , 1980, The Journal of biological chemistry.
[25] B. Sjöberg,et al. A glycyl radical site in the crystal structure of a class III ribonucleotide reductase. , 1999, Science.
[26] G. Murshudov,et al. Refinement of macromolecular structures by the maximum-likelihood method. , 1997, Acta crystallographica. Section D, Biological crystallography.
[27] P. Reichard,et al. From RNA to DNA, why so many ribonucleotide reductases? , 1993, Science.
[28] J. Bollinger,et al. A model for the role of multiple cysteine residues involved in ribonucleotide reduction: amazing and still confusing. , 1992, Biochemistry.
[29] C. Y. Huang,et al. Carboxyl-terminal peptides as probes for Escherichia coli ribonucleotide reductase subunit interaction: kinetic analysis of inhibition studies. , 1991, Biochemistry.
[30] B. Sjöberg,et al. Evidence for two different classes of redox-active cysteines in ribonucleotide reductase of Escherichia coli. , 1989, The Journal of biological chemistry.
[31] M. Ekberg,et al. Preserved Catalytic Activity in an Engineered Ribonucleotide Reductase R2 Protein with a Nonphysiological Radical Transfer Pathway , 1998, The Journal of Biological Chemistry.
[32] M. Karlsson,et al. Occurrence of Multiple Ribonucleotide Reductase Classes in γ-Proteobacteria Species , 2000, Current Microbiology.
[33] Randy J. Read,et al. Pushing the boundaries of molecular replacement with maximum likelihood. , 2001, Acta crystallographica. Section D, Biological crystallography.
[34] B. Sjöberg,et al. Half-site reactivity of the tyrosyl radical of ribonucleotide reductase from Escherichia coli. , 1987, The Journal of biological chemistry.
[35] J. Stubbe,et al. Thiyl Radicals in Ribonucleotide Reductases , 1996, Science.
[36] S. Ramaswamy,et al. The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2. , 1996, Journal of molecular biology.
[37] T. A. Jones,et al. Databases in protein crystallography. , 1998, Acta crystallographica. Section D, Biological crystallography.
[38] U. Rova,et al. Evidence by site-directed mutagenesis supports long-range electron transfer in mouse ribonucleotide reductase. , 1995, Biochemistry.
[39] J. Stubbe,et al. Pre-steady-state and steady-state kinetic analysis of E. coli class I ribonucleotide reductase. , 2003, Biochemistry.
[40] B. Sjöberg,et al. The tyrosyl free radical in ribonucleotide reductase. , 1985, Environmental health perspectives.
[41] K. Regnström,et al. Enhancement by Effectors and Substrate Nucleotides of R1-R2 Interactions in Escherichia coli Class Ia Ribonucleotide Reductase* , 2004, Journal of Biological Chemistry.
[42] U. Rova,et al. Evidence by Mutagenesis that Tyr370 of the Mouse Ribonucleotide Reductase R2 Protein Is the Connecting Link in the Intersubunit Radical Transfer Pathway* , 1999, The Journal of Biological Chemistry.
[43] S. Kuprin,et al. Binding of the competitive inhibitor dCDP to ribonucleoside-diphosphate reductase from Escherichia coli studied by 1H NMR. Different properties of the large protein subunit and the holoenzyme. , 1992, European journal of biochemistry.
[44] H. Eklund,et al. Structure and function of the Escherichia coli ribonucleotide reductase protein R2. , 1993, Journal of molecular biology.
[45] B. Sjöberg,et al. Identification of the stable free radical tyrosine residue in ribonucleotide reductase. , 1986, The EMBO journal.
[46] U. Uhlin,et al. Structure of the large subunit of class Ib ribonucleotide reductase from Salmonella typhimurium and its complexes with allosteric effectors. , 2003, Journal of molecular biology.
[47] J. Stubbe,et al. Location of the redox-active thiols of ribonucleotide reductase: sequence similarity between the Escherichia coli and Lactobacillus leichmannii enzymes. , 1987, Biochemistry.
[48] H. Erickson. Kinetics in the pre-steady state of the formation of cystines in ribonucleoside diphosphate reductase: evidence for an asymmetric complex. , 2001, Biochemistry.
[49] J. Bollinger,et al. Mechanism of assembly of the tyrosyl radical-dinuclear iron cluster cofactor of ribonucleotide reductase. , 1991, Science.
[50] A. Albertini,et al. The Bacillus subtilis genes for ribonucleotide reductase are similar to the genes for the second class I NrdE/NrdF enzymes of Enterobacteriaceae. , 1996, Microbiology.
[51] B. Sjöberg. Ribonucleotide reductases — a group of enzymes with different metallosites and a similar reaction mechanism , 1997 .
[52] M. Eriksson,et al. Binding of allosteric effectors to ribonucleotide reductase protein R1: reduction of active-site cysteines promotes substrate binding. , 1997, Structure.
[53] B. Sjöberg,et al. Crystal structure of the di-iron/radical protein of ribonucleotide reductase from Corynebacterium ammoniagenes. , 2002, Biochemistry.
[54] P. Reichard,et al. Allosteric Regulation of the Third Ribonucleotide Reductase (NrdEF Enzyme) from Enterobacteriaceae* , 1996, The Journal of Biological Chemistry.
[55] J. Stubbe,et al. Characterization of C439SR1, a mutant of Escherichia coli ribonucleotide diphosphate reductase: evidence that C439 is a residue essential for nucleotide reduction and C439SR1 is a protein possessing novel thioredoxin-like activity. , 1992, Biochemistry.
[56] Leif A. Eriksson,et al. Hydrogen Atom Transfer in Ribonucleotide Reductase (RNR) , 1998 .
[57] C. Y. Huang,et al. Site-directed mutagenesis and deletion of the carboxyl terminus of Escherichia coli ribonucleotide reductase protein R2. Effects on catalytic activity and subunit interaction. , 1992, Biochemistry.
[58] H. Rubin,et al. Isolation of ribonucleotide reductase from Mycobacterium tuberculosis and cloning, expression, and purification of the large subunit , 1994, Journal of bacteriology.
[59] B. Sjöberg,et al. Iron ligand mutants in protein R2 of Escherichia coli ribonucleotide reductase , 1996, JBIC Journal of Biological Inorganic Chemistry.
[60] Collaborative Computational,et al. The CCP4 suite: programs for protein crystallography. , 1994, Acta crystallographica. Section D, Biological crystallography.
[61] J. Thornton,et al. PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .
[62] G. Kaplan,et al. Ribonucleotide Reduction in Mycobacterium tuberculosis: Function and Expression of Genes Encoding Class Ib and Class II Ribonucleotide Reductases , 2003, Infection and Immunity.
[63] U. Rova,et al. Kinetic Evidence That a Radical Transfer Pathway in Protein R2 of Mouse Ribonucleotide Reductase Is Involved in Generation of the Tyrosyl Free Radical* , 1998, The Journal of Biological Chemistry.
[64] J. Barbé,et al. Cloning and sequencing of the genes from Salmonella typhimurium encoding a new bacterial ribonucleotide reductase , 1994, Journal of bacteriology.
[65] U. Hellman,et al. The Ribonucleotide Reductase System of Lactococcus lactis , 1996, The Journal of Biological Chemistry.
[66] H. Marsden,et al. Specific inhibition of herpesvirus ribonucleotide reductase by synthetic peptides , 1986, Nature.
[67] P. Reichard,et al. Reduction of ribonucleotides. , 1979, Annual review of biochemistry.
[68] U. Uhlin,et al. Crystal structure of the biologically active form of class Ib ribonucleotide reductase small subunit from Mycobacterium tuberculosis , 2004, FEBS letters.