A New Approach to the Study of Plastidial Stress Granules: The Integrated Use of Arabidopsis thaliana and Chlamydomonas reinhardtii as Model Organisms

The field of stress granules (SGs) has recently emerged in the study of the plant stress response, yet these structures, their dynamics and importance remain poorly characterized. There is currently a gap in our understanding of the physiological function of SGs during stress. Since there are only a few studies addressing SGs in planta, which are primarily focused on cytoplasmic SGs. The recent observation of SG-like foci in the chloroplast (cpSGs) of Arabidopsis thaliana opened even more questions regarding the role of these subcellular features. In this opinion article, we review the current knowledge of cpSGs and propose a workflow for the joint use of the long-established model organisms Chlamydomonas reinhardtii and A. thaliana to accelerate the evaluation of individual plant cpSGs components and their impact on stress responses. Finally, we present a short outlook and what we believe are the significant gaps that need to be addressed in the following years.

[1]  K. Lauersen,et al.  Combinatorial engineering for photoautotrophic production of recombinant products from the green microalga Chlamydomonas reinhardtii , 2022, bioRxiv.

[2]  Nicolás E Figueroa,et al.  Plant Stress Granules: Trends and Beyond , 2021, Frontiers in Plant Science.

[3]  Ewelina M. Sokolowska,et al.  Identification and Characterization of the Heat-Induced Plastidial Stress Granules Reveal New Insight Into Arabidopsis Stress Response , 2020, Frontiers in Plant Science.

[4]  K. Lauersen,et al.  Introns mediate post-transcriptional enhancement of nuclear gene expression in the green microalga Chlamydomonas reinhardtii , 2020, PLoS genetics.

[5]  Shanshan Hu,et al.  Sensitivity and Responses of Chloroplasts to Heat Stress in Plants , 2020, Frontiers in Plant Science.

[6]  F. Mendoza,et al.  Proteasome inhibition rapidly exacerbates photoinhibition and impedes recovery during high light stress in Chlamydomonas reinhardtii , 2020, BMC Plant Biology.

[7]  M. Schroda Good News for Nuclear Transgene Expression in Chlamydomonas , 2019, Cells.

[8]  K. Lauersen,et al.  Intronserter, an advanced online tool for design of intron containing transgenes , 2019, Algal Research.

[9]  Ewelina M. Sokolowska,et al.  Protein and metabolite composition of Arabidopsis stress granules. , 2019, The New phytologist.

[10]  D. Leister Piecing the Puzzle Together: The Central Role of Reactive Oxygen Species and Redox Hubs in Chloroplast Retrograde Signaling. , 2017, Antioxidants & redox signaling.

[11]  Olaf Kruse,et al.  Birth of a Photosynthetic Chassis: A MoClo Toolkit Enabling Synthetic Biology in the Microalga Chlamydomonas reinhardtii. , 2018, ACS synthetic biology.

[12]  P. Jarvis,et al.  Abiotic stress-induced chloroplast proteome remodelling: a mechanistic overview. , 2018, Journal of experimental botany.

[13]  Juan-Hua Chen,et al.  Metabolic Reprogramming in Chloroplasts under Heat Stress in Plants , 2018, International journal of molecular sciences.

[14]  LeisterDario Piecing the Puzzle Together: The Central Role of Reactive Oxygen Species and Redox Hubs in Chloroplast Retrograde Signaling , 2017 .

[15]  J. Bailey-Serres,et al.  Polysomes, Stress Granules, and Processing Bodies: A Dynamic Triumvirate Controlling Cytoplasmic mRNA Fate and Function1[OPEN] , 2017, Plant Physiology.

[16]  M. Jonikas,et al.  A Spatial Interactome Reveals the Protein Organization of the Algal CO2-Concentrating Mechanism , 2017, Cell.

[17]  T. Kleine,et al.  Organellar Gene Expression and Acclimation of Plants to Environmental Stress , 2017, Front. Plant Sci..

[18]  R. Parker,et al.  Principles and Properties of Stress Granules. , 2016, Trends in cell biology.

[19]  H. Daniell,et al.  Chloroplast genomes: diversity, evolution, and applications in genetic engineering , 2016, Genome Biology.

[20]  Anthony Barsic,et al.  ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure , 2016, Cell.

[21]  T. Mühlhaus,et al.  The Chlamydomonas heat stress response. , 2015, The Plant journal : for cell and molecular biology.

[22]  K. Lauersen,et al.  Targeted expression of nuclear transgenes in Chlamydomonas reinhardtii with a versatile, modular vector toolkit , 2015, Applied Microbiology and Biotechnology.

[23]  Timo Mühlhaus,et al.  Systems-Wide Analysis of Acclimation Responses to Long-Term Heat Stress and Recovery in the Photosynthetic Model Organism Chlamydomonas reinhardtii[W][OPEN] , 2014, Plant Cell.

[24]  M. K. Raval,et al.  Photosynthesis , a global sensor of environmental stress in green plants : stress signalling and adaptation † , 2011 .

[25]  A. Millar,et al.  Abiotic environmental stress induced changes in the Arabidopsis thaliana chloroplast, mitochondria and peroxisome proteomes. , 2009, Journal of proteomics.

[26]  C. Weber,et al.  Plant stress granules and mRNA processing bodies are distinct from heat stress granules. , 2008, The Plant journal : for cell and molecular biology.

[27]  W. Zerges,et al.  Stress induces the assembly of RNA granules in the chloroplast of Chlamydomonas reinhardtii , 2008, The Journal of cell biology.

[28]  S. Allakhverdiev,et al.  Photoinhibition of photosystem II under environmental stress. , 2007, Biochimica et biophysica acta.

[29]  A. Grossman,et al.  Genome-Based Examination of Chlorophyll and Carotenoid Biosynthesis in Chlamydomonas reinhardtii1[w] , 2005, Plant Physiology.

[30]  K. Niyogi,et al.  Chlamydomonas and Arabidopsis. A Dynamic Duo1 , 2004, Plant Physiology.

[31]  Dario Leister,et al.  Chloroplast research in the genomic age. , 2003, Trends in genetics : TIG.

[32]  S. Blair Hedges,et al.  The origin and evolution of model organisms , 2002, Nature Reviews Genetics.

[33]  K. Bremer SUMMARY OF GREEN PLANT PHYLOGENY AND CLASSIFICATION , 1985, Cladistics : the international journal of the Willi Hennig Society.