Isolation, characterization and N-terminal amino acid sequence of hydrogenase from the green alga Chlamydomonas reinhardtii.

Hydrogenase from Chlamydomonas reinhardtii was purified to homogeneity by five column-chromatography steps under strict anaerobic conditions. The cells were disrupted by mild treatment with detergent. The enzyme was purified 6100-fold, resulting in a specific activity for H2 evolution of 935 mumol.min-1.mg protein-1 at 25 degrees C, using reduced methyl viologen as electron donor. The optimal temperature for hydrogen evolution is 60 degrees C, the optimal pH value is 6.9. The Km value for methyl viologen is 0.83 mM, for ferredoxin, 35 microM. From SDS/PAGE gels, the protein was judged to be pure. On non-denaturing gels, run under nitrogen, a single band was detected after activity staining. This band corresponded to the single band observed on denaturing SDS gels, which had an apparent molecular mass of 48 kDa. If the band was cut out of the native gel and incubated with reduced methyl viologen, hydrogen evolution could be measured. The purified enzyme contains 4 Fe atoms/mol. The amino acid composition and the N-terminal amino acid sequence (24 residues) of the protein were determined. No significant amino acid sequence homologies could be found to any sequences from prokaryotic hydrogenases.

[1]  E. Kojro,et al.  The quinone-reactive Ni/Fe-hydrogenase of Wolinella succinogenes. , 1992, European journal of biochemistry.

[2]  Hans Gaffron,et al.  CARBON DIOXIDE REDUCTION WITH MOLECULAR HYDROGEN IN GREEN ALGAE , 1940 .

[3]  K. Schneider,et al.  Comparison of the NH2-terminal amino acid sequences of the four non-identical subunits of the NAD-linked hydrogenases from Nocardia opaca 1b and Alcaligenes eutrophus H16. , 1989, European journal of biochemistry.

[4]  S. F. Baron,et al.  Purification and properties of the membrane-associated coenzyme F420-reducing hydrogenase from Methanobacterium formicicum , 1989, Journal of bacteriology.

[5]  H. D. Peck,et al.  Identification of three classes of hydrogenase in the genus, Desulfovibrio. , 1987, Biochemical and biophysical research communications.

[6]  J. Palacios,et al.  Nucleotide sequence and characterization of four additional genes of the hydrogenase structural operon from Rhizobium leguminosarum bv. viciae , 1992, Journal of bacteriology.

[7]  J. Meyer,et al.  Primary structure of hydrogenase I from Clostridium pasteurianum. , 1991, Biochemistry.

[8]  M. Gibbs,et al.  Inactivation of Hydrogenase in Cell-free Extracts and Whole Cells of Chlamydomonas reinhardi by Oxygen. , 1979, Plant physiology.

[9]  P. Roessler,et al.  Activation and de novo synthesis of hydrogenase in chlamydomonas. , 1984, Plant physiology.

[10]  I. N. Gogotov Hydrogenases of phototrophic microorganisms. , 1986, Biochimie.

[11]  K. Shanmugam,et al.  Mutational analysis and characterization of the Escherichia coli hya operon, which encodes [NiFe] hydrogenase 1 , 1991, Journal of bacteriology.

[12]  D. Hall,et al.  Purification of the membrane-bound hydrogenase of Escherichia coli. , 1979, The Biochemical journal.

[13]  R. O. Morris,et al.  Nucleotide sequence of the genetic loci encoding subunits of Bradyrhizobium japonicum uptake hydrogenase. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[14]  M. Müller,et al.  Hydrogenosome, a cytoplasmic organelle of the anaerobic flagellate Tritrichomonas foetus, and its role in pyruvate metabolism. , 1973, The Journal of biological chemistry.

[15]  G. Voordouw,et al.  Organization of the genes encoding [Fe] hydrogenase in Desulfovibrio vulgaris subsp. oxamicus Monticello , 1989, Journal of bacteriology.

[16]  F. Abeles Cell-free Hydrogenase from Chlamydomonas. , 1964, Plant physiology.

[17]  J. Reeve,et al.  Conservation of primary structure in prokaryotic hydrogenases. , 1990, FEMS microbiology reviews.

[18]  F. Healey The Mechanism of Hydrogen Evolution by Chlamydomonas moewusii. , 1970, Plant physiology.

[19]  H. Grande,et al.  Purification and properties of hydrogenase from Megasphaera elsdenii. , 1979, European journal of biochemistry.

[20]  R. Thauer,et al.  H2-forming methylenetetrahydromethanopterin dehydrogenase, a novel type of hydrogenase without iron-sulfur clusters in methanogenic archaea. , 1992, European journal of biochemistry.

[21]  A. I. Krasna,et al.  Structural and catalytic properties of hydrogenase from Chromatium. , 1975, Biochemistry.

[22]  H. D. Peck,et al.  Structure-function relationships among the nickel-containing hydrogenases. , 1992, FEMS microbiology reviews.

[23]  D. Hall,et al.  Properties of the solubilized membrane-bound hydrogenase from the photosynthetic bacterium Rhodospirillum rubrum. , 1979, Archives of biochemistry and biophysics.

[24]  R. Levine,et al.  Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardi. , 1965, Proceedings of the National Academy of Sciences of the United States of America.

[25]  A. Menon,et al.  Nucleotide sequences and genetic analysis of hydrogen oxidation (hox) genes in Azotobacter vinelandii , 1992, Journal of bacteriology.

[26]  M. Adams,et al.  The structure and mechanism of iron-hydrogenases. , 1990, Biochimica et biophysica acta.

[27]  E. Greenbaum,et al.  HYDROGEN and OXYGEN PHOTOPRODUCTION BY MARINE ALGAE * , 1983 .

[28]  M. M. Bradford A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. , 1976, Analytical biochemistry.

[29]  Jack Rubin,et al.  FERMENTATIVE AND PHOTOCHEMICAL PRODUCTION OF HYDROGEN IN ALGAE , 1942, The Journal of general physiology.

[30]  P. Roessler,et al.  Purification of Hydrogenase from Chlamydomonas reinhardtii. , 1984, Plant physiology.

[31]  J. Kulda,et al.  Respiration of hydrogenosomes of Tritrichomonas foetus. I. ADP-dependent oxidation of malate and pyruvate. , 1978, The Journal of biological chemistry.

[32]  A. Ben‐Amotz,et al.  H2 Metabolism in Photosynthetic Organisms: I. Dark H2 Evolution and Uptake by Algae and Mosses 1 , 1975 .

[33]  P. Roessler,et al.  Anionic modulation of the catalytic activity of hydrogenase from Chlamydomonas reinhardtii. , 1982, Archives of biochemistry and biophysics.

[34]  W. Lovenberg,et al.  STUDIES ON THE CHEMICAL NATURE OF CLOSTRIDIAL FERREDOXIN. , 1963, The Journal of biological chemistry.

[35]  M. Teixeira,et al.  The three classes of hydrogenases from sulfate-reducing bacteria of the genus Desulfovibrio. , 1988, FEMS microbiology reviews.

[36]  B. Friedrich,et al.  Maturation of membrane-bound hydrogenase of Alcaligenes eutrophus H16 , 1992, Journal of bacteriology.

[37]  S. Brenner,et al.  Nucleotide sequence of the gene encoding the hydrogenase from Desulfovibrio vulgaris (Hildenborough). , 1985, European journal of biochemistry.

[38]  M. Gibbs,et al.  H(2) and CO(2) Evolution by Anaerobically Adapted Chlamydomonas reinhardtii F-60. , 1982, Plant physiology.

[39]  U. Klein,et al.  Induced Protein Synthesis during the Adaptation to H2 Production in Chlamydomonas moewusii , 1978 .

[40]  Geoffrey D. Smith,et al.  Soluble hydrogenase of Anabaena cylindrica , 1990 .

[41]  M. Rohde,et al.  A gene complex coding for the membrane-bound hydrogenase of Alcaligenes eutrophus H16 , 1992, Journal of bacteriology.

[42]  M. Gibbs,et al.  Hydrogenase-Mediated Activities in Isolated Chloroplasts of Chlamydomonas reinhardii. , 1986, Plant physiology.

[43]  A. Smit,et al.  Nucleotide sequence of the gene proposed to encode the small subunit of the soluble hydrogenase of the thermophilic unicellular cyanobacterium Synechococcus PCC 6716. , 1989, Nucleic acids research.

[44]  A. Ballesteros,et al.  Expression of hydrogenase activity in barley (Hordeum vulgare L.) after anaerobic stress. , 1986, Archives of biochemistry and biophysics.

[45]  N. Bishop Partial Reactions of Photosynthesis and Photoreduction , 1966 .

[46]  D. Hall,et al.  Comparison of the properties of two hydrogenases from the photosynthetic bacterium Chromatium vinosum. , 1984, Archives of biochemistry and biophysics.

[47]  C. Hirs [6] Determination of cystine as cysteic acid , 1967 .

[48]  W. Hagen,et al.  Purification and biochemical characterization of a putative [6Fe-6S] prismane-cluster-containing protein from Desulfovibrio vulgaris (Hildenborough). , 1992, European journal of biochemistry.

[49]  K. Kovács,et al.  Structural properties, functional states and physiological roles of hydrogenase in photosynthetic bacteria , 1990 .

[50]  L. Sayavedra-Soto,et al.  The hoxZ gene of the Azotobacter vinelandii hydrogenase operon is required for activation of hydrogenase , 1992, Journal of bacteriology.

[51]  U. K. Laemmli,et al.  Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 , 1970, Nature.

[52]  H. GAFFRON,et al.  Reduction of Carbon Dioxide with Molecular Hydrogen in Green Algæ , 1939, Nature.