Pharmacological Mechanism‐Based Drug Safety Assessment and Prediction

Advances in cheminformatics, bioinformatics, and pharmacology in the context of biological systems are now at a point that these tools can be applied to mechanism‐based drug safety assessment and prediction. The development of such predictive tools at the US Food and Drug Administration (FDA) will complement ongoing efforts in drug safety that are focused on spontaneous adverse event reporting and active surveillance to monitor drug safety. This effort will require the active collaboration of scientists in the pharmaceutical industry, academe, and the National Institutes of Health, as well as those at the FDA, to reach its full potential. Here, we describe the approaches and goals for the mechanism‐based drug safety assessment and prediction program.

[1]  B. Fermini,et al.  The impact of drug-induced QT interval prolongation on drug discovery and development , 2003, Nature Reviews Drug Discovery.

[2]  Y. Benjamini,et al.  Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .

[3]  Jeremy L Jenkins,et al.  Chemogenomic analysis of safety profiling data. , 2009, Methods in molecular biology.

[4]  Stephen W. Edwards,et al.  Systems biology and mode of action based risk assessment. , 2008, Toxicological sciences : an official journal of the Society of Toxicology.

[5]  J. Senior,et al.  Drug-related hepatotoxicity. , 2006, The New England journal of medicine.

[6]  Manfred Hauben,et al.  Defining ‘Signal’ and its Subtypes in Pharmacovigilance Based on a Systematic Review of Previous Definitions , 2009, Drug safety.

[7]  P. Watkins,et al.  The Application of Metabonomics to Predict Drug‐Induced Liver Injury , 2010, Clinical pharmacology and therapeutics.

[8]  David N Louis,et al.  Rapid targeted mutational analysis of human tumours: a clinical platform to guide personalized cancer medicine , 2010, EMBO molecular medicine.

[9]  L J Lesko,et al.  What Is Clinical Utility and Why Should We Care? , 2010, Clinical pharmacology and therapeutics.

[10]  Lin He,et al.  A CitationRank algorithm inheriting Google technology designed to highlight genes responsible for serious adverse drug reaction , 2009, Bioinform..

[11]  M. Bush,et al.  Probabilistic Risk Analysis: Improving Early Drug Development Decision Making , 2010, Clinical pharmacology and therapeutics.

[12]  J. Overhage,et al.  Advancing the Science for Active Surveillance: Rationale and Design for the Observational Medical Outcomes Partnership , 2010, Annals of Internal Medicine.

[13]  P. Routledge 150 years of pharmacovigilance , 1998, The Lancet.

[14]  A. Chiang,et al.  Data‐Driven Methods to Discover Molecular Determinants of Serious Adverse Drug Events , 2009, Clinical pharmacology and therapeutics.

[15]  R. O’Neill,et al.  Use of Screening Algorithms and Computer Systems to Efficiently Signal Higher-Than-Expected Combinations of Drugs and Events in the US FDA’s Spontaneous Reports Database , 2002, Drug safety.

[16]  I. Ralph Edwards,et al.  Principles of Signal Detection in Pharmacovigilance , 1997, Drug safety.

[17]  W. Mcbride,et al.  Thalidomide and Congenital Abnormalities , 1961 .

[18]  R. Altman,et al.  Clinical implementation of pharmacogenomics: overcoming genetic exceptionalism. , 2010, The Lancet. Oncology.

[19]  Yong Huang,et al.  Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data , 2010, J. Biomed. Informatics.

[20]  F Peter Guengerich,et al.  Applying mechanisms of chemical toxicity to predict drug safety. , 2007, Chemical research in toxicology.

[21]  Yoshiro Saito,et al.  Prediction of severe adverse drug reactions using pharmacogenetic biomarkers. , 2010, Drug metabolism and pharmacokinetics.

[22]  P. Bork,et al.  Drug Target Identification Using Side-Effect Similarity , 2008, Science.

[23]  M. Milik,et al.  Mapping adverse drug reactions in chemical space. , 2009, Journal of medicinal chemistry.

[24]  Tudor I. Oprea,et al.  Systems Chemical Biology , 2019, Methods in Molecular Biology.

[25]  David Cook Improving drug safety using computational biology. , 2010, IDrugs : the investigational drugs journal.

[26]  James L Stevens,et al.  Future of toxicology--mechanisms of toxicity and drug safety: where do we go from here? , 2006, Chemical research in toxicology.

[27]  R. Flanagan,et al.  Haematological toxicity of drugs used in psychiatry , 2008, Human psychopharmacology.

[28]  T. Force Introduction to cardiotoxicity review series. , 2010, Circulation research.

[29]  M. Socinski,et al.  Personalized medicine in non-small-cell lung cancer: is KRAS a useful marker in selecting patients for epidermal growth factor receptor-targeted therapy? , 2010, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[30]  D. Solís US Food and Drug Administration , 2010 .

[31]  R. Platt,et al.  The new Sentinel Network--improving the evidence of medical-product safety. , 2009, The New England journal of medicine.

[32]  A. Bender,et al.  Analysis of Pharmacology Data and the Prediction of Adverse Drug Reactions and Off‐Target Effects from Chemical Structure , 2007, ChemMedChem.

[33]  Prashila Dullabh,et al.  Measurement of the Utilization of an Installed Electronic Health Record , 2010, MedInfo.

[34]  E. Matthews,et al.  Prediction of drug-related cardiac adverse effects in humans--B: use of QSAR programs for early detection of drug-induced cardiac toxicities. , 2010, Regulatory toxicology and pharmacology : RTP.

[35]  K. Chan-Tack,et al.  Intracranial hemorrhage and liver-associated deaths associated with tipranavir/ritonavir: review of cases from the FDA's Adverse Event Reporting System. , 2008, AIDS patient care and STDs.

[36]  T. Nolin,et al.  Mechanisms of drug-induced nephrotoxicity. , 2010, Handbook of experimental pharmacology.

[37]  E. Dropcho Neurotoxicity of cancer chemotherapy. , 2004, Seminars in neurology.

[38]  Joseph M. Tonning,et al.  Pharmacovigilance in the 21st Century: New Systematic Tools for an Old Problem , 2004, Pharmacotherapy.