A genetic linkage map for cattle.

We report the most extensive physically anchored linkage map for cattle produced to date. Three-hundred thirteen genetic markers ordered in 30 linkage groups, anchored to 24 autosomal chromosomes (n = 29), the X and Y chromosomes, four unanchored syntenic groups and two unassigned linkage groups spanning 2464 cM of the bovine genome are summarized. The map also assigns 19 type I loci to specific chromosomes and/or syntenic groups and four cosmid clones containing informative microsatellites to chromosomes 13, 25 and 29 anchoring syntenic groups U11, U7 and U8, respectively. This map provides the skeletal framework prerequisite to development of a comprehensive genetic map for cattle and analysis of economic trait loci (ETL).

[1]  A. Crawford,et al.  Ovine microsatellites at the OarFCB5, OarFCB19, OarFCB20, OarFCB48, OarFCB129 and OarFCB226 loci. , 2009, Animal genetics.

[2]  J. Keele,et al.  Linkage of bovine erythrocyte antigen loci B, C, L, S, Z, R' and T' and the serum protein loci post-transferrin 2 (PTF 2), vitamin D binding protein (GC) and albumin (ALB) to DNA microsatellite markers. , 2009, Animal genetics.

[3]  A. Crawford,et al.  Ovine microsatellites at the OarAE64, OarHH22, OarHH56, OarHH62 and OarVH4 loci. , 2009, Animal genetics.

[4]  C. Beattie,et al.  Cycle sequencing of (CA)n microsatellites from cosmid inserts using degenerate primers. , 1994, BioTechniques.

[5]  R. T. Stone,et al.  A Conceptual Database Model for Genomic Research , 1994, J. Comput. Biol..

[6]  L. Alexander,et al.  A microsatellite linkage map of the porcine genome. , 1994, Genetics.

[7]  J. Lenstra,et al.  Short interspersed nuclear element (SINE) sequences of the Bovidae. , 2009, Animal genetics.

[8]  H. Levéziel,et al.  A new bovine dinucleotide repeat microsatellite: microsatellite INRA 30. , 2009, Animal genetics.

[9]  S. Varvio,et al.  Eight polymorphic bovine microsatellites. , 2009, Animal genetics.

[10]  A. Crawford,et al.  Ovine microsatellites at the OarAE16, OarAE54, OarAE57, OarAE119 and OarAE129 loci. , 2009, Animal genetics.

[11]  D. Hill,et al.  Ovine microsatellites at the OarVH98, OarVH110, OarVH116, OarVH117 and OarVH130 loci. , 2009, Animal genetics.

[12]  R. Fries.  Mapping the bovine genome: methodological aspects and strategy. , 2009, Animal genetics.

[13]  A. Eggen,et al.  Isolation and mapping of polymorphic microsatellites in cattle. , 2009, Animal genetics.

[14]  S. Kemp,et al.  ILSTS008: a polymorphic bovine microsatellite. , 2009, Animal genetics.

[15]  S. Kemp,et al.  ILSTS006: a polymorphic bovine microsatellite. , 2009, Animal genetics.

[16]  A. Crawford,et al.  Ovine microsatellites at the OarFCB11, OarFCB128, OarFCB193, OarFCB266 and OarFCB304 loci. , 2009, Animal genetics.

[17]  E. Lander,et al.  A genetic linkage map of the mouse: current applications and future prospects. , 1993, Science.

[18]  D. Hill,et al.  The ovine Booroola fecundity gene (FecB) is linked to markers from a region of human chromosome 4q , 1993, Nature Genetics.

[19]  S. Kappes,et al.  Rapid communication: restriction fragment length polymorphisms in the bovine calpastatin gene. , 1993, Journal of animal science.

[20]  M. Georges,et al.  Microsatellite mapping of the gene causing weaver disease in cattle will allow the study of an associated quantitative trait locus. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[21]  Nancy A. Jenkins,et al.  Anchored reference loci for comparative genome mapping in mammals , 1993, Nature Genetics.

[22]  M. Georges,et al.  Microsatellite mapping of a gene affecting horn development in Bos taurus , 1993, Nature Genetics.

[23]  S. Kemp,et al.  ILSTS001: a polymorphic bovine microsatellite. , 2009, Animal genetics.

[24]  B. Kirkpatrick.  Detection of a three-allele single strand conformation polymorphism (SSCP) in the fourth intron of the bovine growth hormone gene. , 2009, Animal genetics.

[25]  A. Crawford,et al.  Ovine dinucleotide repeat polymorphism at the MAF50 locus. , 2009, Animal genetics.

[26]  S. Moore,et al.  Bovine and ovine DNA microsatellites from the EMBL and GENBANK databases. , 2009, Animal genetics.

[27]  J. Womack,et al.  Ovine and bovine dinucleotide repeat polymorphism at the MAF46 locus. , 2009, Animal genetics.

[28]  A. Crawford,et al.  Ovine dinucleotide repeat polymorphism at the MAF65 locus. , 2009, Animal genetics.

[29]  R. Osta,et al.  Characterization of five new bovine dinucleotide repeats. , 2009, Animal genetics.

[30]  A. Crawford,et al.  Ovine dinucleotide repeat polymorphism at the MAF70 locus. , 2009, Animal genetics.

[31]  L. Skow,et al.  Syntenic conservation of HSP70 genes in cattle and humans. , 1992, Genomics.

[32]  D. Symons,et al.  Genomic organisation and sequence of the extracellular domain exons of the bovine Fc gamma RI receptor, and evidence for restricted binding of ruminant IgG to U937 cells. , 1992, Molecular immunology.

[33]  G. Gyapay,et al.  A second-generation linkage map of the human genome , 1992, Nature.

[34]  A. Eggen,et al.  Mapping of bovine markers CYP21, PRL, and BOLA DRBP1 by genetic linkage analysis in reference pedigrees. , 1992, Genomics.

[35]  E. Hoffman,et al.  Periodic paralysis in Quarter Horses: a sodium channel mutation disseminated by selective breeding , 1992, Nature Genetics.

[36]  T. Hudson,et al.  Isolation and chromosomal assignment of 100 highly informative human simple sequence repeat polymorphisms. , 1992, Genomics.

[37]  S. Varvio,et al.  Artiodactyl retroposons: association with microsatellites and use in SINEmorph detection by PCR. , 1992, Nucleic acids research.

[38]  E S Lander,et al.  A genetic map of the mouse suitable for typing intraspecific crosses. , 1992, Genetics.

[39]  J. Weber,et al.  Survey of human and rat microsatellites. , 1992, Genomics.

[40]  A. Crawford,et al.  Ovine dinucleotide repeat polymorphism at the MAF23 locus. , 2009, Animal genetics.

[41]  A. Crawford,et al.  Ovine dinucleotide repeat polymorphism at the MAF35 locus. , 2009, Animal genetics.

[42]  A. Crawford,et al.  Ovine dinucleotide repeat polymorphism at the MAF92 locus. , 2009, Animal genetics.

[43]  Y. Horio,et al.  Expression cloning of a cDNA encoding the bovine histamine H1 receptor. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[44]  A. Carsana,et al.  Molecular cloning of the gene encoding the bovine brain ribonuclease and its expression in different regions of the brain. , 1991, Nucleic acids research.

[45]  D. Threadgill,et al.  Somatic cell mapping and restriction fragment length polymorphism analysis of bovine insulin-like growth factor I. , 1991, Journal of animal science.

[46]  T. Mizuno,et al.  Structure of the bovine atrial natriuretic peptide receptor (type C) gene. , 1991, The Journal of biological chemistry.

[47]  M. Yuille,et al.  Rapid determination of sequences flanking microsatellites. , 1991, Nucleic acids research.

[48]  D. Threadgill,et al.  Mapping of bovine cytokeratin sequences to four different sites on three chromosomes. , 1991, Cytogenetics and cell genetics.

[49]  J. Womack,et al.  Mapping HSA10 homologous loci in cattle. , 1991, Cytogenetics and cell genetics.

[50]  S. Krawetz,et al.  Evidence for the evolutionary origin of human chromosome 21 from comparative gene mapping in the cow and mouse. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[51]  I. Hoeschele,et al.  Association of genetic defects with yield and type traits: the weaver locus effect on yield. , 1990, Journal of dairy science.

[52]  J. Weber.  Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms. , 1990, Genomics.

[53]  R. Ivarie,et al.  A bovine homolog to the human myogenic determination factor myf-5: sequence conservation and 3' processing of transcripts. , 1990, Nucleic acids research.

[54]  H. Hayes,et al.  International System for Cytogenetic Nomenclature of Domestic Animals (1989) , 1990 .

[55]  S J O'Brien,et al.  Report of the committee on comparative gene mapping. , 1990, Cytogenetics and cell genetics.

[56]  D. Threadgill,et al.  The thyroglobulin gene is syntenic with the MYC and MOS protooncogenes and carbonic anhydrase II and maps to chromosome 14 in cattle. , 1990, Cytogenetics and cell genetics.

[57]  D. Threadgill,et al.  Genomic analysis of the major bovine milk protein genes. , 1990, Nucleic acids research.

[58]  T. Sekiya,et al.  Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction. , 1989, Genomics.

[59]  S. Mirzoeva,et al.  Calmodulin‐independent bovine brain adenylate cyclase Amino acid sequence and nucleotide sequence of the corresponding cDNA , 1989, FEBS letters.

[60]  J. Weber,et al.  Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. , 1989, American journal of human genetics.

[61]  J. Beckmann,et al.  Mapping of bovine prolactin and rhodopsin genes in hybrid somatic cells. , 2009, Animal genetics.

[62]  R. Fries,et al.  The loci for parathyroid hormone and beta-globin are closely linked and map to chromosome 15 in cattle. , 1988, Genomics.

[63]  L. Skow,et al.  Synteny mapping of the genes for 21 steroid hydroxylase, alpha A crystallin, and class I bovine leukocyte antigen in cattle. , 1988, DNA.

[64]  K. Mullis,et al.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. , 1988, Science.

[65]  K. Mullis,et al.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. , 1985, Science.

[66]  H. Levéziel,et al.  Linkage in cattle between the major histocompatibility complex (BoLA) and the M blood group system , 1984, Génétique, sélection, évolution.

[67]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[68]  C. A. Thomas,et al.  Molecular cloning. , 1977, Advances in pathobiology.

[69]  B. Larsen.  Blood groups and polymorphic proteins in cattle and swine , 1971, Annales de génétique et de sélection animale.

[70]  D. D. Kosambi.  The estimation of map distances from recombination values. , 1943 .