Soil bacterial community structure in Chinese wetlands

[1]  Jiabao Li,et al.  Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse , 2017, Scientific Reports.

[2]  Jiabao Li,et al.  Scale-dependent key drivers controlling methane oxidation potential in Chinese grassland soils , 2017 .

[3]  Zhili He,et al.  The differentiation of soil bacterial communities along a precipitation and temperature gradient in the eastern Inner Mongolia steppe , 2017 .

[4]  Mark Vellend,et al.  Assessing the relative importance of neutral stochasticity in ecological communities , 2014 .

[5]  Paul Grogan,et al.  Soil fertility is associated with fungal and bacterial richness, whereas pH is associated with community composition in polar soil microbial communities , 2014 .

[6]  Yongliang Chen,et al.  Soil organic carbon and soil structure are driving microbial abundance and community composition across the arid and semi-arid grasslands in northern China , 2014 .

[7]  Noah Fierer,et al.  Why are some microbes more ubiquitous than others? Predicting the habitat breadth of soil bacteria. , 2014, Ecology letters.

[8]  Y. Ju,et al.  Bacterial Community Structure in Two Permafrost Wetlands on the Tibetan Plateau and Sanjiang Plain, China , 2014, Microbial Ecology.

[9]  H. Chu,et al.  High throughput sequencing analysis of biogeographical distribution of bacterial communities in the black soils of northeast China , 2014 .

[10]  Nicholas A. Bokulich,et al.  Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate , 2013, Proceedings of the National Academy of Sciences.

[11]  Jizhong Zhou,et al.  The microbial gene diversity along an elevation gradient of the Tibetan grassland , 2013, The ISME Journal.

[12]  B. Montuelle,et al.  Long-term impact of hydrological regime on structure and functions of microbial communities in riverine wetland sediments. , 2013, FEMS microbiology ecology.

[13]  E. Gömöryová,et al.  Soil microbial community response to variation in vegetation and abiotic environment in a temperate old-growth forest , 2013 .

[14]  Werner Liesack,et al.  Pyrosequencing-Based Assessment of the Bacteria Diversity in Surface and Subsurface Peat Layers of a Northern Wetland, with Focus on Poorly Studied Phyla and Candidate Divisions , 2013, PloS one.

[15]  Yongxin Pan,et al.  Integrating niche-based process and spatial process in biogeography of magnetotactic bacteria , 2013, Scientific Reports.

[16]  Jianqing Tian,et al.  The biogeography of fungal communities in wetland sediments along the Changjiang River and other sites in China , 2013, The ISME Journal.

[17]  E. Zhang,et al.  Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes , 2013, The ISME Journal.

[18]  J. Fuhrman,et al.  Beyond biogeographic patterns: processes shaping the microbial landscape , 2012, Nature Reviews Microbiology.

[19]  A. Konopka,et al.  Stochastic and deterministic assembly processes in subsurface microbial communities , 2012, The ISME Journal.

[20]  S. Langenheder,et al.  Local and regional factors influencing bacterial community assembly. , 2012, Environmental microbiology reports.

[21]  S. Sørensen,et al.  454‐sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities , 2012 .

[22]  Jianjun Wang,et al.  Do Patterns of Bacterial Diversity along Salinity Gradients Differ from Those Observed for Macroorganisms? , 2011, PloS one.

[23]  Jonathan M. Chase,et al.  Disentangling the importance of ecological niches from stochastic processes across scales , 2011, Philosophical Transactions of the Royal Society B: Biological Sciences.

[24]  Rob Knight,et al.  UCHIME improves sensitivity and speed of chimera detection , 2011, Bioinform..

[25]  S. Allison,et al.  Drivers of bacterial β-diversity depend on spatial scale , 2011, Proceedings of the National Academy of Sciences.

[26]  C. McKay,et al.  Stochastic and deterministic processes interact in the assembly of desert microbial communities on a global scale , 2011, The ISME Journal.

[27]  S. Langenheder,et al.  Species sorting and neutral processes are both important during the initial assembly of bacterial communities , 2011, The ISME Journal.

[28]  Irina Dana Ofiteru,et al.  Combined niche and neutral effects in a microbial wastewater treatment community , 2010, Proceedings of the National Academy of Sciences.

[29]  Emily B Hollister,et al.  Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments , 2010, The ISME Journal.

[30]  Mark Vellend,et al.  Conceptual Synthesis in Community Ecology , 2010, The Quarterly Review of Biology.

[31]  Ariane L. Peralta,et al.  Microbial Community Structure and Denitrification in a Wetland Mitigation Bank , 2010, Applied and Environmental Microbiology.

[32]  William A. Walters,et al.  QIIME allows analysis of high-throughput community sequencing data , 2010, Nature Methods.

[33]  M. Cottrell,et al.  The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes. , 2010, Environmental microbiology.

[34]  Calvin Dytham,et al.  Relative roles of niche and neutral processes in structuring a soil microbial community , 2010, The ISME Journal.

[35]  Anders F. Andersson,et al.  Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities , 2010, The ISME Journal.

[36]  J. Rousk,et al.  Adaptation of soil microbial communities to temperature: comparison of fungi and bacteria in a laboratory experiment , 2009 .

[37]  S. Bertilsson,et al.  Infrequent marine-freshwater transitions in the microbial world. , 2009, Trends in microbiology.

[38]  R. Knight,et al.  Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale , 2009, Applied and Environmental Microbiology.

[39]  Ping Chen,et al.  History and evolution of alpine plants endemic to the Qinghai‐Tibetan Plateau: Aconitum gymnandrum (Ranunculaceae) , 2009, Molecular ecology.

[40]  C. Richardson,et al.  Environmental and anthropogenic controls over bacterial communities in wetland soils , 2008, Proceedings of the National Academy of Sciences.

[41]  Yanfen Wang,et al.  Methanogen community in Zoige wetland of Tibetan plateau and phenotypic characterization of a dominant uncultured methanogen cluster ZC-I. , 2008, Environmental microbiology.

[42]  C. J. van der Gast,et al.  Temporal scaling of bacterial taxa is influenced by both stochastic and deterministic ecological factors. , 2008, Environmental microbiology.

[43]  B. Bohannan,et al.  Microbial Biogeography: From Taxonomy to Traits , 2008, Science.

[44]  S. Langenheder,et al.  The role of environmental and spatial factors for the composition of aquatic bacterial communities. , 2007, Ecology.

[45]  F. Lei,et al.  Areas of endemism and patterns of diversity for aphids of the Qinghai‐Tibetan Plateau and the Himalayas , 2007 .

[46]  R. Knight,et al.  Global patterns in bacterial diversity , 2007, Proceedings of the National Academy of Sciences.

[47]  Laura E. Green,et al.  The role of ecological theory in microbial ecology , 2007, Nature Reviews Microbiology.

[48]  R. Miller,et al.  Using landscape and depth gradients to decouple the impact of correlated environmental variables on soil microbial community composition , 2007 .

[49]  B. Bohannan,et al.  Spatial scaling of microbial biodiversity. , 2006, Trends in ecology & evolution.

[50]  M. Häggblom,et al.  Effects of vegetation on root-associated microbial communities: A comparison of disturbed versus undisturbed estuarine sediments , 2006 .

[51]  W. Liesack,et al.  Phylogenetic Analysis and In Situ Identification of Bacteria Community Composition in an Acidic Sphagnum Peat Bog , 2006, Applied and Environmental Microbiology.

[52]  James H. Brown,et al.  Microbial biogeography: putting microorganisms on the map , 2006, Nature Reviews Microbiology.

[53]  R. B. Jackson,et al.  The diversity and biogeography of soil bacterial communities. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[54]  S. Tringe,et al.  Comparative Metagenomics of Microbial Communities , 2004, Science.

[55]  J. Hughes,et al.  A taxa–area relationship for bacteria , 2004, Nature.

[56]  J. Handelsman,et al.  Metagenomics: genomic analysis of microbial communities. , 2004, Annual review of genetics.

[57]  K. Scow,et al.  Soil Water Content and Organic Carbon Availability Are Major Determinants of Soil Microbial Community Composition , 2004, Microbial Ecology.

[58]  J. Ehrenfeld,et al.  Experimental analysis of the effect of exotic and native plant species on the structure and function of soil microbial communities. , 2003 .

[59]  W. Horwath,et al.  Spectrophotometric Determination of Nitrate with a Single Reagent , 2003 .

[60]  I. Law Race in the News , 2001 .

[61]  T. Marsh Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products. , 1999, Current opinion in microbiology.

[62]  P. Saetre Spatial patterns of ground vegetation, soil microbial biomass and activity in a mixed spruce-birch stand , 1999 .

[63]  B. Degens,et al.  Development of a physiological approach to measuring the catabolic diversity of soil microbial communities , 1997 .

[64]  M. Nilsson,et al.  Bacterial communities in peat in relation to botanical composition as revealed by phospholipid fatty acid analysis , 1994 .

[65]  A. Uitterlinden,et al.  Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA , 1993, Applied and environmental microbiology.

[66]  E. Delong,et al.  Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing , 1991, Journal of bacteriology.

[67]  E. Gorham Northern Peatlands: Role in the Carbon Cycle and Probable Responses to Climatic Warming. , 1991, Ecological applications : a publication of the Ecological Society of America.

[68]  M. W. Weatherburn Phenol-hypochlorite reaction for determination of ammonia , 1967 .

[69]  A. Walkley,et al.  AN EXAMINATION OF THE DEGTJAREFF METHOD FOR DETERMINING SOIL ORGANIC MATTER, AND A PROPOSED MODIFICATION OF THE CHROMIC ACID TITRATION METHOD , 1934 .

[70]  Scott T. Bates,et al.  Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide. , 2015, Ecology letters.

[71]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[72]  V. Torsvik,et al.  Effects of temperature on the diversity and community structure of known methanogenic groups and other archaea in high Arctic peat , 2008, The ISME Journal.

[73]  G. Kowalchuk,et al.  Denaturing gradient gel electrophoresis (DGGE) in microbial ecology. , 2004 .