Automated classification of local patches in colon histopathology

An automated histology analysis is proposed for classification of local image patches of colon histopathology images into four principle classes: normal, cancer, adenomatous and inflamed classes. Shape features based on stroma, lumen and imperfectly segmented nuclei are combined with texture features for classification. The classification is analyzed under the three scenarios: normal vs. abnormal, cancer vs. non-cancer and four-class classification on a labeled dataset consisting of 2000 patches per class which were collected from 55 different slices. The proposed method achieves 79.28% mean accuracy between normal and abnormal; 87.67% accuracy between cancer and non-cancer and 75.15% between the four classes with equal class priories.

[1]  Yuejiao Fu,et al.  Effect of Quantitative Nuclear Image Features on Recurrence of Ductal Carcinoma In Situ (DCIS) of the Breast , 2008, Cancer informatics.

[2]  Marjolein van Ballegooijen,et al.  Inter‐observer variation in the histological diagnosis of polyps in colorectal cancer screening , 2011, Histopathology.

[3]  Anant Madabhushi,et al.  Automated grading of breast cancer histopathology using spectral clustering with textural and architectural image features , 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[4]  Levente Ficsor,et al.  Automated classification of inflammation in colon histological sections based on digital microscopy and advanced image analysis , 2008, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[5]  Elmer P. Dadios,et al.  Analysis of colonic histopathological images using pixel intensities and Hough Transform , 2010, SciEnggJ.

[6]  Tony Lindeberg,et al.  Detecting salient blob-like image structures and their scales with a scale-space primal sketch: A method for focus-of-attention , 1993, International Journal of Computer Vision.

[7]  B. S. Manjunath,et al.  Use of imperfectly segmented nuclei in the classification of histopathology images of breast cancer , 2010, 2010 IEEE International Conference on Acoustics, Speech and Signal Processing.

[8]  A. Madabhushi,et al.  Histopathological Image Analysis: A Review , 2009, IEEE Reviews in Biomedical Engineering.

[9]  Bayan S. Sharif,et al.  Fractal analysis in the detection of colonic cancer images , 2002, IEEE Transactions on Information Technology in Biomedicine.

[10]  S. Raab,et al.  Inter-observer variation in the histological diagnosis of polyps in colorectal cancer screening , 2012 .

[11]  Jun Kong,et al.  Computer-aided prognosis of neuroblastoma on whole-slide images: Classification of stromal development , 2009, Pattern Recognit..

[12]  B. Ripley,et al.  Pattern Recognition , 1968, Nature.