Genetic analysis of RNA-mediated transcriptional gene silencing.
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Marjori Matzke | Istvan Papp | M. Matzke | M. Mette | A. Matzke | W. Aufsatz | T. Kanno | L. Daxinger | Werner Aufsatz | Lucia Daxinger | Tatsuo Kanno | Antonius J M Matzke | M Florian Mette | I. Papp
[1] Ira M. Hall,et al. Establishment and Maintenance of a Heterochromatin Domain , 2002, Science.
[2] J. Bender,et al. Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene. , 2001, Genes & development.
[3] R. Roberts,et al. Co‐operation and communication between the human maintenance and de novo DNA (cytosine‐5) methyltransferases , 2002, The EMBO journal.
[4] Marjori Matzke,et al. Role of the DRM and CMT3 Methyltransferases in RNA-Directed DNA Methylation , 2003, Current Biology.
[5] Philippe Mourrain,et al. Fertile Hypomorphic ARGONAUTE (ago1) Mutants Impaired in Post-Transcriptional Gene Silencing and Virus Resistance , 2002, The Plant Cell Online.
[6] Olivier Voinnet,et al. Two classes of short interfering RNA in RNA silencing , 2002, The EMBO journal.
[7] G. Ruvkun,et al. A uniform system for microRNA annotation. , 2003, RNA.
[8] D. Haber,et al. DNA Methyltransferases Dnmt3a and Dnmt3b Are Essential for De Novo Methylation and Mammalian Development , 1999, Cell.
[9] A. Bateman,et al. Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain. , 2000, Trends in biochemical sciences.
[10] M. Matzke,et al. HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double‐stranded RNA , 2002, The EMBO journal.
[11] Ira M. Hall,et al. Regulation of Heterochromatic Silencing and Histone H3 Lysine-9 Methylation by RNAi , 2002, Science.
[12] Ira M. Hall,et al. RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[13] M. Matzke,et al. Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanisms in plants and vertebrates , 2000, Plant Molecular Biology.
[14] B. Reinhart,et al. MicroRNAs in plants. , 2002, Genes & development.
[15] V. Kim,et al. The nuclear RNase III Drosha initiates microRNA processing , 2003, Nature.
[16] S. Baylin,et al. DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci , 2000, Nature Genetics.
[17] T. Bestor,et al. DNA (cytosine-5)-methyltransferases in mouse cells and tissues. Studies with a mechanism-based probe. , 1997, Journal of molecular biology.
[18] D. Bouchez,et al. AGO1 defines a novel locus of Arabidopsis controlling leaf development , 1998, The EMBO journal.
[19] M. A. Rector,et al. Endogenous and Silencing-Associated Small RNAs in Plants Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.003210. , 2002, The Plant Cell Online.
[20] D. Hornby,et al. Activation of a yeast pseudo DNA methyltransferase by deletion of a single amino acid. , 1996, Journal of molecular biology.
[21] H. L. Sänger,et al. RNA-directed de novo methylation of genomic sequences in plants , 1994, Cell.
[22] H. Cerutti,et al. RNA interference: traveling in the cell and gaining functions? , 2003, Trends in genetics : TIG.
[23] S. Jacobsen,et al. Role of the Arabidopsis DRM Methyltransferases in De Novo DNA Methylation and Gene Silencing , 2002, Current Biology.
[24] G. Jürgens,et al. Role of the ZWILLE gene in the regulation of central shoot meristem cell fate during Arabidopsis embryogenesis , 1998, The EMBO journal.
[25] M. Wassenegger. RNA-directed DNA methylation , 2000, Plant Molecular Biology.
[26] V. Ambros,et al. MicroRNAs and Other Tiny Endogenous RNAs in C. elegans , 2003, Current Biology.
[27] P. Waterhouse,et al. Posttranscriptional Gene Silencing Is Not Compromised in the Arabidopsis CARPEL FACTORY (DICER-LIKE1) Mutant, a Homolog of Dicer-1 from Drosophila , 2003, Current Biology.
[28] M. Yao,et al. Programmed DNA Deletion As an RNA-Guided System of Genome Defense , 2003, Science.
[29] S. Melquist,et al. Transcription from an upstream promoter controls methylation signaling from an inverted repeat of endogenous genes in Arabidopsis. , 2003, Genes & development.
[30] Marjori Matzke,et al. Evidence for Nuclear Processing of Plant Micro RNA and Short Interfering RNA Precursors1[w] , 2003, Plant Physiology.
[31] B. Bloom,et al. Chip Shots--Will Functional Genomics Get Functional? , 2001, Science.
[32] Jan Barciszewski,et al. Noncoding RNAs : molecular biology and molecular medicine , 2003 .
[33] G. Hannon,et al. RNAi: an ever-growing puzzle. , 2003, Trends in biochemical sciences.
[34] J. P. Jackson,et al. Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase , 2002, Nature.
[35] R. Strom,et al. Influence of pre-existing methylation on the de novo activity of eukaryotic DNA methyltransferase. , 1998, Biochemistry.
[36] D. Mount,et al. Analysis of Histone Acetyltransferase and Histone Deacetylase Families of Arabidopsis Thaliana Suggests Functional Diversi®cation of Chromatin Modi®cation among Multicellular Eukaryotes , 2002 .
[37] Xiaofeng Cao,et al. ARGONAUTE4 Control of Locus-Specific siRNA Accumulation and DNA and Histone Methylation , 2003, Science.
[38] D. Moazed,et al. Heterochromatin and Epigenetic Control of Gene Expression , 2003, Science.
[39] T. V. Kolesnikova,et al. Functional domains in tetraspanin proteins. , 2003, Trends in biochemical sciences.
[40] R J Roberts,et al. Recombinant Human DNA (Cytosine-5) Methyltransferase , 1999, The Journal of Biological Chemistry.
[41] B. Cullen,et al. RNA interference in human cells is restricted to the cytoplasm. , 2002, RNA.
[42] D. Higgs,et al. Mutations in ATRX, encoding a SWI/SNF-like protein, cause diverse changes in the pattern of DNA methylation , 2000, Nature Genetics.
[43] M. Schuler,et al. Functional analysis of regulatory elements in a plant embryo-specific gene. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[44] C. Allis,et al. Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa , 2003, Nature Genetics.
[45] R. Allshire,et al. Hairpin RNAs and Retrotransposon LTRs Effect RNAi and Chromatin-Based Gene Silencing , 2003, Science.
[46] S. S. Smith,et al. Methylation of slipped duplexes, snapbacks and cruciforms by human DNA(cytosine-5)methyltransferase. , 1995, Nucleic acids research.
[47] R. Russell,et al. bantam Encodes a Developmentally Regulated microRNA that Controls Cell Proliferation and Regulates the Proapoptotic Gene hid in Drosophila , 2003, Cell.
[48] L. Lim,et al. An Abundant Class of Tiny RNAs with Probable Regulatory Roles in Caenorhabditis elegans , 2001, Science.
[49] B. Reinhart,et al. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA , 2000, Nature.
[50] J. Messing,et al. CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in microRNA Metabolism in Arabidopsis thaliana , 2002, Current Biology.
[51] Olivier Voinnet,et al. RNA silencing: small RNAs as ubiquitous regulators of gene expression. , 2002, Current opinion in plant biology.
[52] F. Slack,et al. Control of developmental timing by small temporal RNAs: a paradigm for RNA‐mediated regulation of gene expression , 2002, BioEssays : news and reviews in molecular, cellular and developmental biology.
[53] A. Wutz. RNAs templating chromatin structure for dosage compensation in animals. , 2003, BioEssays : news and reviews in molecular, cellular and developmental biology.
[54] T. Sijen,et al. Transcriptional and posttranscriptional gene silencing are mechanistically related , 2001, Current Biology.
[55] A. Bird,et al. Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[56] T. Tuschl,et al. Identification of Novel Genes Coding for Small Expressed RNAs , 2001, Science.
[57] F. Lyko,et al. DNA methylation learns to fly. , 2001, Trends in genetics : TIG.
[58] Luke Hughes-Davies,et al. DNA methyltransferase Dnmt1 associates with histone deacetylase activity , 2000, Nature Genetics.
[59] R. Roberts,et al. I. EXPRESSION, PURIFICATION, AND COMPARISON OF DE NOVO AND MAINTENANCE METHYLATION* , 1999 .
[60] T. Bestor,et al. The DNA methyltransferases of mammals. , 2000, Human molecular genetics.
[61] J. Jeddeloh,et al. Arabidopsis MET1 cytosine methyltransferase mutants. , 2003, Genetics.
[62] D. Marks,et al. The small RNA profile during Drosophila melanogaster development. , 2003, Developmental cell.
[63] V. Ambros,et al. An Extensive Class of Small RNAs in Caenorhabditis elegans , 2001, Science.
[64] H. Vaucheret,et al. AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[65] Animesh Ray,et al. DICER-LIKE1: blind men and elephants in Arabidopsis development. , 2002, Trends in plant science.
[66] B. Reinhart,et al. Small RNAs Correspond to Centromere Heterochromatic Repeats , 2002, Science.
[67] J. Birchler,et al. RNAi related mechanisms affect both transcriptional and posttranscriptional transgene silencing in Drosophila. , 2002, Molecular cell.
[68] Javier F. Palatnik,et al. Control of leaf morphogenesis by microRNAs , 2003, Nature.
[69] M. Groudine,et al. DNA Methylation Density Influences the Stability of an Epigenetic Imprint and Dnmt3a/b-Independent De Novo Methylation , 2002, Molecular and Cellular Biology.
[70] G. G. Stokes. "J." , 1890, The New Yale Book of Quotations.
[71] D. Baulcombe,et al. Suppression of gene silencing: a general strategy used by diverse DNA and RNA viruses of plants. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[72] V. Kim,et al. MicroRNA maturation: stepwise processing and subcellular localization , 2002, The EMBO journal.
[73] Peter L. Jones,et al. DNMT1 forms a complex with Rb, E2F1 and HDAC1 and represses transcription from E2F-responsive promoters , 2000, Nature Genetics.
[74] Neff Walker,et al. A MicroRNA as a Translational Repressor of APETALA2 in Arabidopsis Flower Development , 2004 .
[75] E. Selker,et al. A histone H3 methyltransferase controls DNA methylation in Neurospora crassa , 2001, Nature.
[76] J. P. Jackson,et al. Requirement of CHROMOMETHYLASE3 for Maintenance of CpXpG Methylation , 2001, Science.
[77] E. Finnegan,et al. Plant DNA methyltransferases , 2000, Plant Molecular Biology.
[78] Brenda L Bass,et al. RNA editing by adenosine deaminases that act on RNA. , 2002, Annual review of biochemistry.
[79] David P. Bartel,et al. MicroRNAs: At the Root of Plant Development?1 , 2003, Plant Physiology.
[80] Kenneth Y. Tsai,et al. Control of CpNpG DNA methylation by the KRYPTONITE histone H 3 methyltransferase , 2002 .
[81] M. Matzke,et al. RNA-directed DNA methylation in Arabidopsis , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[82] Michael Q. Zhang,et al. The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. , 2002, Genes & development.
[83] Louise Jones,et al. RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance , 2001, Current Biology.
[84] M. Matzke,et al. Transcriptional silencing and promoter methylation triggered by double‐stranded RNA , 2000, The EMBO journal.
[85] Gary Ruvkun,et al. Glimpses of a Tiny RNA World , 2001, Science.
[86] W. Filipowicz,et al. Specific interference with gene expression induced by long, double-stranded RNA in mouse embryonal teratocarcinoma cell lines , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[87] F. Ding,et al. Genomic Imprinting Disrupted by a Maternal Effect Mutation in the Dnmt1 Gene , 2001, Cell.
[88] Gangning Liang,et al. Cooperativity between DNA Methyltransferases in the Maintenance Methylation of Repetitive Elements , 2002, Molecular and Cellular Biology.
[89] T. Kouzarides,et al. Dnmt3a binds deacetylases and is recruited by a sequence‐specific repressor to silence transcription , 2001, The EMBO journal.
[90] K. Muegge,et al. Lsh, a member of the SNF2 family, is required for genome-wide methylation. , 2001, Genes & development.
[91] T. Bestor,et al. Dnmt3L and the Establishment of Maternal Genomic Imprints , 2001, Science.
[92] G. Macino,et al. Isolation of quelling-defective (qde) mutants impaired in posttranscriptional transgene-induced gene silencing in Neurospora crassa. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[93] Bert Vogelstein,et al. DNMT1 and DNMT3b cooperate to silence genes in human cancer cells , 2002, Nature.
[94] A. Bird,et al. The fission yeast gene pmt1+ encodes a DNA methyltransferase homologue. , 1995, Nucleic acids research.
[95] A. Fire,et al. Recognition and silencing of repeated DNA. , 2000, Annual review of genetics.
[96] J. Bender,et al. An Arabidopsis SET domain protein required for maintenance but not establishment of DNA methylation , 2002, The EMBO journal.
[97] S. S. Smith,et al. Recognition of unusual DNA structures by human DNA (cytosine-5)methyltransferase. , 1991, Journal of molecular biology.
[98] T. Volpe,et al. RNA interference is required for normal centromere function infission yeast , 2004, Chromosome Research.
[99] K. Taira,et al. Hes1 is a target of microRNA-23 during retinoic-acid-induced neuronal differentiation of NT2 cells , 2003, Nature.
[100] Andrew Fire,et al. The rde-1 Gene, RNA Interference, and Transposon Silencing in C. elegans , 1999, Cell.
[101] C. Hsieh. In Vivo Activity of Murine De Novo Methyltransferases, Dnmt3a and Dnmt3b , 1999, Molecular and Cellular Biology.
[102] T. Hashimshony,et al. The role of DNA methylation in setting up chromatin structure during development , 2003, Nature Genetics.
[103] A. Jeltsch,et al. Dnmt3a and Dnmt1 functionally cooperate during de novo methylation of DNA. , 2002, European journal of biochemistry.
[104] J. Paszkowski,et al. Disruption of the plant gene MOM releases transcriptional silencing of methylated genes , 2000, Nature.
[105] J. Jeddeloh,et al. Maintenance of genomic methylation requires a SWI2/SNF2-like protein , 1999, Nature Genetics.
[106] P. Masson,et al. The PINHEAD/ZWILLE gene acts pleiotropically in Arabidopsis development and has overlapping functions with the ARGONAUTE1 gene. , 1999, Development.