Optimum-transformation of plant species cover-abundance values

Most of the methods used in the multivariate analysis of data on vegetation and environment, or transformations implied in such methods, put disproportionate emphasis on species with a relatively wide ecological amplitude occurring with relatively high cover-abundance values, and/or rare species. This problem can be overcome to some extent by reducing the cover-abundance values to presence-absence data, but this means a severe loss of information. A standardization of values by species maxima as is done automatically in some programs, may lead to an undesirable emphasis on species represented with low values only. In this paper a method is presented, by which relatively low cover-abundance values of species are upweighted to an arbitrarily chosen higher value, if these low values are considered to indicate an optimum response of that particular species. The method has been tested on a selection of 40 phytosociological relevés from dune slacks in the Voorne dunes, as well as on the Dune Meadow data set used in the textbook of Jongman et al. (1987). The cluster structure obtained with the optimum-transformation appears to be clearer and the contribution of typical dune slack species to the cluster structure increased significantly. Canonical correspondence analysis of the transformed data gave slightly more important main axes.

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