Effective electronic Hamiltonian for quantum subsystem in hybrid QM/MM methods as derived from APSLG description of electronic structure of classical part of molecular system☆

Abstract The general formulae representing separation of electronic variables of quantum (reactive) subsystem from those describing electrons in the classical (chemically inert) part of molecular system are specified for the case when the electronic structure of the latter is described by a semi-empirical method based on the trial wave function having the form of antisymmetrized product of strictly localized geminals (APSLG) which leads to a local description of molecular electronic structure in terms of bond functions and lone pair functions. This allowed us to give an explicit form of the effective electronic Hamiltonian for the quantum subsystem and also by this to sequentially derive the explicit form of the QM/MM junction between the quantum and classical subsystems. The latter turned out to be a sum of the contributions from different chemical bonds and lone pairs residing in the classical part of the system. Numerical estimates for the effect of the renormalization of the Coulomb interaction of π -electrons due to presence of σ -bonds are performed according to the derived formulae.

[1]  Z. Maksić,et al.  Theoretical Models of Chemical Bonding , 1991 .

[2]  John A Pople Quantum Chemical Models (Nobel Lecture). , 1999, Angewandte Chemie.

[3]  György G. Ferenczy,et al.  Quantum mechanical computations on very large molecular systems: The local self‐consistent field method , 1994, J. Comput. Chem..

[4]  Feliu Maseras,et al.  IMOMM: A new integrated ab initio + molecular mechanics geometry optimization scheme of equilibrium structures and transition states , 1995, J. Comput. Chem..

[5]  Keiji Morokuma,et al.  Application of the New “Integrated MO + MM” (IMOMM) Method to the Organometallic Reaction Pt(PR3)2 + H2 (R = H, Me, t-Bu, and Ph) , 1996 .

[6]  G. Segal Semiempirical Methods of Electronic Structure Calculation , 1977 .

[7]  P. Löwdin Studies in Perturbation Theory. IV. Solution of Eigenvalue Problem by Projection Operator Formalism , 1962 .

[8]  T. E. Peacock Electronic properties of aromatic and heterocyclic molecules , 1965 .

[9]  Isaac B. Bersuker,et al.  A METHOD OF COMBINED QUANTUM MECHANICAL (QM)/MOLECULAR MECHANICS (MM) TREATMENT OF LARGE POLYATOMIC SYSTEMS WITH CHARGE TRANSFER BETWEEN THE QM AND MM FRAGMENTS , 1997 .

[10]  Karl F. Freed,et al.  Abinitio computation of semiempirical π‐electron methods. II. Transferability of Hν parameters between ethylene, trans‐butadiene, and cyclobutadiene , 1994 .

[11]  Andrei L. Tchougréeff,et al.  Group functions, Löwdin partition, and hybrid QC/MM methods for large molecular systems , 1999 .

[12]  R. Mcweeny,et al.  Methods Of Molecular Quantum Mechanics , 1969 .

[13]  Thanh N. Truong,et al.  Development of a perturbative approach for Monte Carlo simulations using a hybrid ab initio QM/MM method , 1996 .

[14]  Jean-Raymond Abrial,et al.  On B , 1998, B.

[15]  Bernard Pullman,et al.  Intermolecular interactions, from diatomics to biopolymers , 1978 .

[16]  Fernando Bernardi,et al.  Simulation of MC-SCF results on covalent organic multi-bond reactions: molecular mechanics with valence bond (MM-VB) , 1992 .

[17]  Andrey A. Bliznyuk,et al.  A combined quantum chemical/molecular mechanical study of hydrogen-bonded systems , 1992 .

[18]  Dieter Cremer,et al.  The Concept of the Chemical Bond , 1990 .