Characterization of noise in multistable genetic circuits reveals ways to modulate heterogeneity
暂无分享,去创建一个
[1] T. Elston,et al. Stochasticity in gene expression: from theories to phenotypes , 2005, Nature Reviews Genetics.
[2] A. E. Hirsh,et al. Noise Minimization in Eukaryotic Gene Expression , 2004, PLoS biology.
[3] Kazuyuki Aihara,et al. Multivariate analysis of noise in genetic regulatory networks. , 2004, Journal of theoretical biology.
[4] J. Ferrell,et al. Interlinked Fast and Slow Positive Feedback Loops Drive Reliable Cell Decisions , 2005, Science.
[5] S. Hagen,et al. Microfluidic study of competence regulation in Streptococcus mutans: environmental inputs modulate bimodal and unimodal expression of comX , 2012, Molecular microbiology.
[6] Indrani Bose,et al. Positive feedback, stochasticity and genetic competence , 2007, Physical biology.
[7] N. Popović,et al. Phenotypic switching in gene regulatory networks , 2014, Proceedings of the National Academy of Sciences.
[8] M. L. Simpson,et al. Gene network shaping of inherent noise spectra , 2006, Nature.
[9] A. Kierzek,et al. The Effect of Transcription and Translation Initiation Frequencies on the Stochastic Fluctuations in Prokaryotic Gene Expression* , 2001, The Journal of Biological Chemistry.
[10] N. Wingreen,et al. Exponential sensitivity of noise-driven switching in genetic networks , 2007, Physical biology.
[11] Tobias Galla,et al. Bursting noise in gene expression dynamics: linking microscopic and mesoscopic models , 2015, Journal of The Royal Society Interface.
[12] D. Dubnau,et al. Noise in Gene Expression Determines Cell Fate in Bacillus subtilis , 2007, Science.
[13] Alexander van Oudenaarden,et al. Stochastic Gene Expression: from Single Molecules to the Proteome This Review Comes from a Themed Issue on Chromosomes and Expression Mechanisms Edited Measuring Noise Mrna Fluctuations , 2022 .
[14] F. Bruggeman,et al. Elongation dynamics shape bursty transcription and translation , 2009, Proceedings of the National Academy of Sciences.
[15] Fabian J Theis,et al. Method of conditional moments (MCM) for the Chemical Master Equation , 2013, Journal of Mathematical Biology.
[16] L. Diambra,et al. Cooperative Binding of Transcription Factors Promotes Bimodal Gene Expression Response , 2012, PloS one.
[17] Nir Friedman,et al. Linking stochastic dynamics to population distribution: an analytical framework of gene expression. , 2006, Physical review letters.
[18] M. Thattai,et al. Intrinsic noise in gene regulatory networks , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[19] Naama Barkai,et al. Noise Propagation and Signaling Sensitivity in Biological Networks: A Role for Positive Feedback , 2007, PLoS Comput. Biol..
[20] Rajan P Kulkarni,et al. Tunability and Noise Dependence in Differentiation Dynamics , 2007, Science.
[21] L. Diambra,et al. Promoters Architecture-Based Mechanism for Noise-Induced Oscillations in a Single-Gene Circuit , 2016, PloS one.
[22] Jürgen Tomasch,et al. The Alternative Sigma Factor SigX Controls Bacteriocin Synthesis and Competence, the Two Quorum Sensing Regulated Traits in Streptococcus mutans , 2015, PLoS genetics.
[23] Shasha Chong,et al. Mechanism of Transcriptional Bursting in Bacteria , 2014, Cell.
[24] Philipp Thomas,et al. Computation of biochemical pathway fluctuations beyond the linear noise approximation using iNA , 2012, 2012 IEEE International Conference on Bioinformatics and Biomedicine.
[25] R. Grima,et al. An effective rate equation approach to reaction kinetics in small volumes: theory and application to biochemical reactions in nonequilibrium steady-state conditions. , 2010, The Journal of chemical physics.
[26] L. Serrano,et al. Engineering stability in gene networks by autoregulation , 2000, Nature.
[27] A. van Oudenaarden,et al. Noise Propagation in Gene Networks , 2005, Science.
[28] Ertugrul M. Ozbudak,et al. Regulation of noise in the expression of a single gene , 2002, Nature Genetics.
[29] A. Grossman. Genetic networks controlling the initiation of sporulation and the development of genetic competence in Bacillus subtilis. , 1995, Annual review of genetics.
[30] Michael B. Elowitz,et al. Architecture-Dependent Noise Discriminates Functionally Analogous Differentiation Circuits , 2009, Cell.
[31] E. O’Shea,et al. Noise in protein expression scales with natural protein abundance , 2006, Nature Genetics.
[32] A. Singh. Negative Feedback Through mRNA Provides the Best Control of Gene-Expression Noise , 2011, IEEE Transactions on NanoBioscience.
[33] Tobias Jahnke,et al. On Reduced Models for the Chemical Master Equation , 2011, Multiscale Model. Simul..
[34] Jack Xin,et al. A Critical Quantity for Noise Attenuation in Feedback Systems , 2010, PLoS Comput. Biol..
[35] Erwin Frey,et al. Stochastic switching to competence. , 2008, Current opinion in microbiology.
[36] U. Alon. Network motifs: theory and experimental approaches , 2007, Nature Reviews Genetics.
[37] Andreas Kremling,et al. A Comparison of Deterministic and Stochastic Modeling Approaches for Biochemical Reaction Systems: On Fixed Points, Means, and Modes , 2016, Front. Genet..
[38] Meng Chen,et al. Noise Attenuation in the ON and OFF States of Biological Switches , 2013, ACS synthetic biology.