Facile synthesis and spectroscopic elucidation of 4,11-bis(dehydroxy)-bipolaroamide

A new diketopiperazine was formed by facile condensation of the artificial 2-indoline carboxylic acid. This highly crystalline compound was characterized by NMR-spectroscopy as well as X-ray crystallography. Spectroscopic data of the new pentacyclic diketopiperazine revealed further evidence that the phosphite-promoted coupling used is free of racemization or inversion. These stereochemical results are important for this advanced reaction and may lead to a key step in the total synthesis of many natural products. The dimerized 2-indoline carboxylic acid described herein was chosen to be a model system for structure and reaction studies on route to the favored rostratines.

[1]  K. Kanoh,et al.  (-)-Phenylahistin arrests cells in mitosis by inhibiting tubulin polymerization. , 1999, The Journal of antibiotics.

[2]  Patrick Flammang,et al.  Morphology and tenacity of the tube foot disc of three common European sea urchin species: a comparative study , 2006, Biofouling.

[3]  Y. Hayashi,et al.  NPI-2358 is a tubulin-depolymerizing agent: in-vitro evidence for activity as a tumor vascular-disrupting agent , 2006, Anti-cancer drugs.

[4]  Y. Shizuri,et al.  Novel antifungal diketopiperazine from marine fungus. , 2003, The Journal of antibiotics.

[5]  B. Synstad,et al.  Structure-based exploration of cyclic dipeptide chitinase inhibitors. , 2004, Journal of medicinal chemistry.

[6]  Jan C. A. Boeyens,et al.  The conformation of six-membered rings , 1978 .

[7]  G. Sheldrick A short history of SHELX. , 2008, Acta crystallographica. Section A, Foundations of crystallography.

[8]  R. Riguera,et al.  dd-diketopiperazines: antibiotics active against Vibrio anguillarum isolated from marine bacteria associated with cultures of Pecten maximus. , 2003, Journal of natural products.

[9]  P. Qian,et al.  Antifouling diketopiperazines produced by a deep-sea bacterium, Streptomyces fungicidicus , 2006, Biofouling.

[10]  E. De Clercq,et al.  Synthesis and Antiviral Properties of Arabino and Ribonucleosides of 1,3‐Dideazaadenine, 4‐Nitro‐1, 3‐dideazaadenine and Diketopiperazine , 2004, Nucleosides, nucleotides & nucleic acids.

[11]  H. Flack,et al.  On enantiomorph‐polarity estimation , 1983 .

[12]  D. Cremer,et al.  General definition of ring puckering coordinates , 1975 .

[13]  S. Bräse,et al.  Microwave‐Assisted Stereoselective One‐Pot Synthesis of Symmetrical and Unsymmetrical 2,5‐Diketopiperazines from Unprotected Amino Acids , 2008 .

[14]  P. Williams,et al.  Isolation and structure assignments of rostratins A-D, cytotoxic disulfides produced by the marine-derived fungus Exserohilum rostratum. , 2004, Journal of natural products.

[15]  Dieter Cremer,et al.  On the correct usage of the Cremer–Pople puckering parameters as quantitative descriptors of ring shapes – a reply to recent criticism by Petit, Dillen and Geise , 1984 .

[16]  D. Schollmeyer,et al.  Investigation of Diketopiperazines Containing a Guanidino‐Functionalized Sidechain as Potential Catalysts of Enantioselective Strecker Reactions , 2005 .

[17]  T. Hofmann,et al.  Structures, sensory activity, and dose/response functions of 2,5-diketopiperazines in roasted cocoa nibs (Theobroma cacao). , 2005, Journal of agricultural and food chemistry.