Origin and pathogenesis of nodular lymphocyte–predominant Hodgkin lymphoma as revealed by global gene expression analysis
暂无分享,去创建一个
Martin-Leo Hansmann | Brunangelo Falini | Verena Brune | Wolfram Klapper | Dirk Metzler | Claudia Döring | Enrico Tiacci | Ralf Küppers | W. Klapper | B. Falini | R. Küppers | D. Metzler | M. Hansmann | A. Bräuninger | C. V. van Noesel | A. von Heydebreck | V. Brune | E. Tiacci | Andreas Bräuninger | C. Döring | Anja von Heydebreck | Ines Pfeil | Susan Eckerle | Carel J.M. van Noesel | S. Eckerle | I. Pfeil
[1] Jean YH Yang,et al. Bioconductor: open software development for computational biology and bioinformatics , 2004, Genome Biology.
[2] B. Jungnickel,et al. Differential expression of activation‐induced cytidine deaminase (AID) in nodular lymphocyte‐predominant and classical Hodgkin lymphoma , 2005, The Journal of pathology.
[3] P. Fisher,et al. mda-9/Syntenin: a positive regulator of melanoma metastasis. , 2005, Cancer research.
[4] H. Stein,et al. Differential expression and function of A20 and TRAF1 in Hodgkin lymphoma and anaplastic large cell lymphoma and their induction by CD30 stimulation , 2003, The Journal of pathology.
[5] M. Leroy,et al. A role for PKCzeta in the LPS-induced translocation NF-kappaB p65 subunit in cultured myometrial cells. , 2005, Biochimie.
[6] G. Rabinovich,et al. The coming of age of galectins as immunomodulatory agents: impact of these carbohydrate binding proteins in T cell physiology and chronic inflammatory disorders , 2005, Annals of the rheumatic diseases.
[7] N. Perkins,et al. Integrating cell-signalling pathways with NF-kappaB and IKK function. , 2007, Nature reviews. Molecular cell biology.
[8] J. Banchereau,et al. Germinal Center Founder Cells Display Propensity for Apoptosis before Onset of Somatic Mutation , 1997, The Journal of experimental medicine.
[9] Y. Natkunam,et al. Selective loss of B‐cell phenotype in lymphocyte predominant Hodgkin lymphoma , 2007, The Journal of pathology.
[10] Ulrich Siebenlist,et al. Constitutive Nuclear Factor κB Activity Is Required for Survival of Activated B Cell–like Diffuse Large B Cell Lymphoma Cells , 2001, The Journal of experimental medicine.
[11] Marcel Leist,et al. Cathepsin B Acts as a Dominant Execution Protease in Tumor Cell Apoptosis Induced by Tumor Necrosis Factor , 2001, The Journal of cell biology.
[12] J. Delabie,et al. Lymphocyte predominance Hodgkin disease is characterized by recurrent genomic imbalances. , 2001, Blood.
[13] S. Tangye,et al. Kinetics of Human B Cell Behavior and Amplification of Proliferative Responses following Stimulation with IL-211 , 2006, The Journal of Immunology.
[14] P. Lipsky,et al. Identification and characterization of circulating human transitional B cells. , 2005, Blood.
[15] I. H. Engels,et al. Caspase-2 Can Function Upstream of Bid Cleavage in the TRAIL Apoptosis Pathway* , 2004, Journal of Biological Chemistry.
[16] A. Diepstra,et al. Common and differential chemokine expression patterns in rs cells of NLP, EBV positive and negative classical hodgkin lymphomas , 2002, International journal of cancer.
[17] V. Diehl,et al. Loss of the B-lineage-specific gene expression program in Hodgkin and Reed-Sternberg cells of Hodgkin lymphoma. , 2003, Blood.
[18] E. Schuuring,et al. Cortactin affects cell migration by regulating intercellular adhesion and cell spreading. , 2006, Experimental cell research.
[19] S. Hillion,et al. Expression of RAGs in Peripheral B Cells outside Germinal Centers Is Associated with the Expression of CD51 , 2005, The Journal of Immunology.
[20] M. Colonna,et al. Cutting Edge: Activation of NK Cell-Mediated Cytotoxicity by a SAP-Independent Receptor of the CD2 Family1 , 2001, The Journal of Immunology.
[21] Y. Tu,et al. Cattoretti and Riccardo Dalla-favera Tracking Cd40 Signaling during Germinal Center Development , 2022 .
[22] H. J. Kim,et al. NF-kappaB and IKK as therapeutic targets in cancer. , 2006, Cell death and differentiation.
[23] Xiaodong Cheng,et al. Antiapoptotic effect of serum and glucocorticoid-inducible protein kinase is mediated by novel mechanism activating I{kappa}B kinase. , 2005, Cancer research.
[24] P. Henkart,et al. Surface Cathepsin B Protects Cytotoxic Lymphocytes from Self-destruction after Degranulation , 2002, The Journal of experimental medicine.
[25] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .
[26] E. Ulvestad,et al. Inhibition of phytohaemagglutinin‐induced lymphoproliferation by soluble annexin II in sera from patients with renal cell carcinoma , 1997, APMIS : acta pathologica, microbiologica, et immunologica Scandinavica.
[27] S. Shirasawa,et al. Transformation by Oncogenic RAS Sensitizes Human Colon Cells to TRAIL-induced Apoptosis by Up-regulating Death Receptor 4 and Death Receptor 5 through a MEK-dependent Pathway* , 2005, Journal of Biological Chemistry.
[28] Y. Natkunam,et al. Transmembrane adaptor molecules: a new category of lymphoid-cell markers. , 2006, Blood.
[29] R. Küppers. Molecular biology of Hodgkin's lymphoma. , 2002, Advances in cancer research.
[30] S. Olson,et al. Expression of c-FLIP in Classic and Nodular Lymphocyte-Predominant Hodgkin Lymphoma , 2004, Applied immunohistochemistry & molecular morphology : AIMM.
[31] Pedro Romero,et al. Matrix metalloproteinase 9 (MMP-9/gelatinase B) proteolytically cleaves ICAM-1 and participates in tumor cell resistance to natural killer cell-mediated cytotoxicity , 2002, Oncogene.
[32] P. Isaacson,et al. CD10 and BCL-6 expression in paraffin sections of normal lymphoid tissue and B-cell lymphomas. , 2000, The American journal of surgical pathology.
[33] Martin Vingron,et al. Variance stabilization applied to microarray data calibration and to the quantification of differential expression , 2002, ISMB.
[34] P. Isaacson,et al. Malignant lymphomas with a follicular growth pattern , 1996, Histopathology.
[35] Kazuyoshi Takeda,et al. New aspects of natural-killer-cell surveillance and therapy of cancer , 2002, Nature Reviews Cancer.
[36] David E Levy,et al. STAT1 acts as a tumor promoter for leukemia development. , 2006, Cancer cell.
[37] Siew Hong Leong,et al. FAT10 Plays a Role in the Regulation of Chromosomal Stability* , 2006, Journal of Biological Chemistry.
[38] G. Korbutt,et al. Mannose 6-Phosphate/Insulin-like Growth Factor II Receptor Is a Death Receptor for Granzyme B during Cytotoxic T Cell–Induced Apoptosis , 2000, Cell.
[39] Sulin Wu,et al. Cytosolic Retention of Phosphorylated Extracellular Signal-Regulated Kinase and a Rho-Associated Kinase-Mediated Signal Impair Expression of p21Cip1/Waf1 in Phorbol 12-Myristate-13- Acetate-Induced Apoptotic Cells , 2002, Molecular and Cellular Biology.
[40] K. Savage,et al. TRAF1 Expression and c-Rel Activation Are Useful Adjuncts in Distinguishing Classical Hodgkin Lymphoma From a Subset of Morphologically or Immunophenotypically Similar Lymphomas , 2005, The American journal of surgical pathology.
[41] J. Mandell,et al. Phosphorylation state-specific antibodies: applications in investigative and diagnostic pathology. , 2003, The American journal of pathology.
[42] T. Lister,et al. Characteristics of Sternberg-Reed, and related cells in Hodgkin's disease: an immunohistological study. , 1984, British Journal of Cancer.
[43] H. J. Kim,et al. NF-κB and IKK as therapeutic targets in cancer , 2006, Cell Death and Differentiation.
[44] B. Lim,et al. The Hematopoiesis-Specific GTP-Binding Protein RhoH Is GTPase Deficient and Modulates Activities of Other Rho GTPases by an Inhibitory Function , 2002, Molecular and Cellular Biology.
[45] Hidetoshi Shimodaira,et al. Pvclust: an R package for assessing the uncertainty in hierarchical clustering , 2006, Bioinform..
[46] Y. Natkunam,et al. Loss of CD19 expression in B‐cell neoplasms , 2006, Histopathology.
[47] M. Rebsamen,et al. Prostaglandin E2 activates Stat3 in neonatal rat ventricular cardiomyocytes: A role in cardiac hypertrophy. , 2007, Cardiovascular research.
[48] E. Campo,et al. Aberrant somatic hypermutation in tumor cells of nodular-lymphocyte-predominant and classic Hodgkin lymphoma. , 2006, Blood.
[49] H. Ling,et al. The chitinase 3-like protein human cartilage glycoprotein 39 (HC-gp39) stimulates proliferation of human connective-tissue cells and activates both extracellular signal-regulated kinase- and protein kinase B-mediated signalling pathways. , 2002, The Biochemical journal.
[50] R. Siebert,et al. Aberrant expression of ID2, a suppressor of B-cell-specific gene expression, in Hodgkin's lymphoma. , 2006, The American journal of pathology.
[51] C. Meijer,et al. Differential Expression of Thymus and Activation Regulated Chemokine and Its Receptor CCR4 in Nodal and Cutaneous Anaplastic Large-Cell Lymphomas and Hodgkin's Disease , 2002, Modern Pathology.
[52] M. Saji,et al. Metastin receptor is overexpressed in papillary thyroid cancer and activates MAP kinase in thyroid cancer cells. , 2002, The Journal of clinical endocrinology and metabolism.
[53] T. Speed,et al. Summaries of Affymetrix GeneChip probe level data. , 2003, Nucleic acids research.
[54] Andrea Califano,et al. Identification of Hodgkin and Reed-Sternberg cell-specific genes by gene expression profiling. , 2003, The Journal of clinical investigation.
[55] C. Borrebaeck,et al. The Human CD77− B Cell Population Represents a Heterogeneous Subset of Cells Comprising Centroblasts, Centrocytes, and Plasmablasts, Prompting Phenotypical Revision1 , 2006, The Journal of Immunology.
[56] W. Chan,et al. Gcet1 (centerin), a highly restricted marker for a subset of germinal center-derived lymphomas. , 2008, Blood.
[57] Andrea Califano,et al. Transcriptional analysis of the B cell germinal center reaction , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[58] D. Strumberg,et al. The Ras-Raf-MEK-ERK Pathway in the Treatment of Cancer , 2002, Oncology Research and Treatment.
[59] S. Pileri,et al. Expression of intracellular signaling molecules in classical and lymphocyte predominance Hodgkin disease. , 2004, Blood.
[60] M. Braga,et al. Exploratory Data Analysis , 2018, Encyclopedia of Social Network Analysis and Mining. 2nd Ed..
[61] Yasodha Natkunam,et al. Expression of the human germinal center-associated lymphoma (HGAL) protein, a new marker of germinal center B-cell derivation. , 2004, Blood.
[62] B. Dörken,et al. Constitutive nuclear factor-kappaB-RelA activation is required for proliferation and survival of Hodgkin's disease tumor cells. , 1997, The Journal of clinical investigation.
[63] T. Golub,et al. Molecular profiling of diffuse large B-cell lymphoma identifies robust subtypes including one characterized by host inflammatory response. , 2004, Blood.
[64] E. Wherry,et al. Effector and memory CD8+ T cell fate coupled by T-bet and eomesodermin , 2005, Nature Immunology.
[65] C. Fellbaum,et al. Expression patterns of transcription factors in progressively transformed germinal centers and Hodgkin lymphoma , 2003, Virchows Archiv.
[66] Martin Zenke,et al. Nuclear Factor κB–dependent Gene Expression Profiling of Hodgkin's Disease Tumor Cells, Pathogenetic Significance, and Link to Constitutive Signal Transducer and Activator of Transcription 5a Activity , 2002, The Journal of experimental medicine.
[67] Mamoun Younes,et al. MEK/ERK pathway is aberrantly active in Hodgkin disease: a signaling pathway shared by CD30, CD40, and RANK that regulates cell proliferation and survival. , 2003, Blood.
[68] S. Alkan,et al. Characterization of NF-kappaB expression in Hodgkin's disease: inhibition of constitutively expressed NF-kappaB results in spontaneous caspase-independent apoptosis in Hodgkin and Reed-Sternberg cells. , 2001, Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc.
[69] Richard Simon,et al. Molecular diagnosis of Burkitt's lymphoma. , 2006, The New England journal of medicine.
[70] E. Jaffe,et al. T-Cell/Histiocyte-Rich Large B-Cell Lymphoma: A Heterogeneous Entity With Derivation From Germinal Center B Cells , 2002, The American journal of surgical pathology.
[71] G. Niedobitek,et al. Frequent expression of the Epstein–Barr virus (EBV)‐induced gene, EBI3, an IL‐12 p40‐related cytokine, in Hodgkin and Reed–Sternberg cells , 2002, The Journal of pathology.
[72] S. Franceschi,et al. Expression status of BCL-6 and syndecan-1 identifies distinct histogenetic subtypes of Hodgkin's disease. , 1998, Blood.
[73] V. Diehl,et al. Profiling of Hodgkin’s Lymphoma Cell Line L1236 and Germinal Center B Cells: Identification of Hodgkin’s Lymphoma-specific Genes , 2003 .
[74] M. Stack,et al. Calcium-induced Matrix Metalloproteinase 9 Gene Expression Is Differentially Regulated by ERK1/2 and p38 MAPK in Oral Keratinocytes and Oral Squamous Cell Carcinoma* , 2004, Journal of Biological Chemistry.
[75] A. Carbone,et al. CD40 ligand is constitutively expressed in a subset of T cell lymphomas and on the microenvironmental reactive T cells of follicular lymphomas and Hodgkin's disease. , 1995, The American journal of pathology.
[76] A. Kossakowska,et al. Proteolytic activity of human non-Hodgkin's lymphomas. , 1998, The American journal of pathology.
[77] A. Roessner,et al. Interactions between human colon carcinoma cells, fibroblasts and monocytic cells in coculture--regulation of cathepsin B expression and invasiveness. , 2005, Cancer letters.
[78] J. Abramson. T-cell/histiocyte-rich B-cell lymphoma: biology, diagnosis, and management. , 2006, The oncologist.
[79] Michael Karin,et al. The IKK NF-kappa B system: a treasure trove for drug development. , 2004, Nature reviews. Drug discovery.
[80] S. Alkan,et al. Characterization of NF-κB Expression in Hodgkin’s Disease: Inhibition of Constitutively Expressed NF-κB Results in Spontaneous Caspase-Independent Apoptosis in Hodgkin and Reed-Sternberg Cells , 2001, Modern Pathology.
[81] S. Hirohashi,et al. β‐Catenin mutations in pulmonary blastomas: association with morule formation , 2003, The Journal of pathology.
[82] H. Herbst,et al. Modulation of interleukin‐6 expression in Hodgkin and Reed–Sternberg cells by Epstein–Barr virus , 1997, The Journal of pathology.
[83] M. Leroy,et al. A role for PKCζ in the LPS-induced translocation NF-κB p65 subunit in cultured myometrial cells , 2005 .
[84] R. Siebert,et al. Frequent occurrence of BCL6 rearrangements in nodular lymphocyte predominance Hodgkin lymphoma but not in classical Hodgkin lymphoma. , 2003, Blood.
[85] C. Weinberg,et al. Galectin-1: A bifunctional regulator of cellular proliferation , 2004, Glycoconjugate Journal.
[86] Ash A. Alizadeh,et al. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling , 2000, Nature.
[87] M. Caputi,et al. The urokinase plasminogen activator and its receptor , 2005, Thrombosis and Haemostasis.
[88] S. Pileri,et al. Distinctive expression pattern of the BCL-6 protein in nodular lymphocyte predominance Hodgkin's disease. , 1996, Blood.
[89] U. Zabel,et al. Nuclear uptake control of NF‐kappa B by MAD‐3, an I kappa B protein present in the nucleus. , 1993, The EMBO journal.
[90] R. Siebert,et al. Molecular cytogenetic analyses of immunoglobulin loci in nodular lymphocyte predominant Hodgkin's lymphoma reveal a recurrent IGH-BCL6 juxtaposition. , 2005, The Journal of molecular diagnostics : JMD.