High‐throughput cell mechanical phenotyping for label‐free titration assays of cytoskeletal modifications

The mechanical fingerprint of cells is inherently linked to the structure of the cytoskeleton and can serve as a label‐free marker for cell homeostasis or pathologic states. How cytoskeletal composition affects the physical response of cells to external loads has been intensively studied with a spectrum of techniques, yet quantitative and statistically powerful investigations in the form of titration assays are hampered by the low throughput of most available methods. In this study, we employ real‐time deformability cytometry (RT‐DC), a novel microfluidic tool to examine the effects of biochemically modified F‐actin and microtubule stability and nuclear chromatin structure on cell deformation in a human leukemia cell line (HL60). The high throughput of our method facilitates extensive titration assays that allow for significance assessment of the observed effects and extraction of half‐maximal concentrations for most of the applied reagents. We quantitatively show that integrity of the F‐actin cortex and microtubule network dominate cell deformation on millisecond timescales probed with RT‐DC. Drug‐induced alterations in the nuclear chromatin structure were not found to consistently affect cell deformation. The sensitivity of the high‐throughput cell mechanical measurements to the cytoskeletal modifications we present in this study opens up new possibilities for label‐free dose‐response assays of cytoskeletal modifications.

[1]  I. Sokolov,et al.  Atomic Force Microscopy in Cancer Cell Research , 2007 .

[2]  Yo Sup Moon,et al.  Quantitative Diagnosis of Malignant Pleural Effusions by Single-Cell Mechanophenotyping , 2013, Science Translational Medicine.

[3]  Jochen Guck,et al.  Mechanics Meets Medicine , 2013, Science Translational Medicine.

[4]  E. Sausville,et al.  Jasplakinolide, a cytotoxic natural product, induces actin polymerization and competitively inhibits the binding of phalloidin to F-actin. , 1994, The Journal of biological chemistry.

[5]  M. Long,et al.  Comparison of the viscoelastic properties of normal hepatocytes and hepatocellular carcinoma cells under cytoskeletal perturbation. , 2000, Biorheology.

[6]  Chwee Teck Lim,et al.  Connections between single-cell biomechanics and human disease states: gastrointestinal cancer and malaria. , 2005, Acta biomaterialia.

[7]  E. Nogales,et al.  Structure of tubulin at 6.5 Å and location of the taxol-binding site , 1995, Nature.

[8]  Jochen Guck,et al.  Viscoelastic Properties of Differentiating Blood Cells Are Fate- and Function-Dependent , 2012, PloS one.

[9]  Katarina Wolf,et al.  Probing the compressibility of tumor cell nuclei by combined atomic force–confocal microscopy , 2013, Physical biology.

[10]  Falk Wottawah,et al.  Oral cancer diagnosis by mechanical phenotyping. , 2009, Cancer research.

[11]  P. Schiff,et al.  Promotion of microtubule assembly in vitro by taxol , 1979, Nature.

[12]  Subra Suresh,et al.  Biomechanics and biophysics of cancer cells. , 2007, Acta biomaterialia.

[13]  A. Martinez-Arias,et al.  Chromatin decondensation and nuclear softening accompany Nanog downregulation in embryonic stem cells. , 2012, Biophysical journal.

[14]  F. Lautenschlaeger Cell compliance : cytoskeletal origin and importance for cellular function , 2011 .

[15]  Dino Di Carlo,et al.  Pinched-flow hydrodynamic stretching of single-cells. , 2013, Lab on a chip.

[16]  MunJu Kim,et al.  Mechanical aspects of microtubule bundling in taxane-treated circulating tumor cells. , 2014, Biophysical journal.

[17]  J. Davies,et al.  Molecular Biology of the Cell , 1983, Bristol Medico-Chirurgical Journal.

[18]  M. Jordan,et al.  Mechanism of mitotic block and inhibition of cell proliferation by taxol at low concentrations. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[19]  R. Waugh,et al.  Passive mechanical behavior of human neutrophils: effects of colchicine and paclitaxel. , 1998, Biophysical journal.

[20]  Oliver Otto,et al.  Extracting Cell Stiffness from Real-Time Deformability Cytometry: Theory and Experiment , 2015, Biophysical journal.

[21]  J. Cooper,et al.  Effects of cytochalasin and phalloidin on actin , 1987, The Journal of cell biology.

[22]  Amy C. Rowat,et al.  Screening cell mechanotype by parallel microfiltration , 2015, Scientific Reports.

[23]  Lap Man Lee,et al.  A microfluidic pipette array for mechanophenotyping of cancer cells and mechanical gating of mechanosensitive channels. , 2015, Lab on a chip.

[24]  U. Keyser,et al.  Real-time deformability cytometry: on-the-fly cell mechanical phenotyping , 2015, Nature Methods.

[25]  Dimos Poulikakos,et al.  A Nanoprinted Model of Interstitial Cancer Migration Reveals a Link between Cell Deformability and Proliferation. , 2016, ACS nano.

[26]  Raymond J. Andersen,et al.  Cytotoxic peptides hemiasterlin, hemiasterlin A and hemiasterlin B induce mitotic arrest and abnormal spindle formation , 1996, Cancer Chemotherapy and Pharmacology.

[27]  A. Verin,et al.  Microtubule disassembly increases endothelial cell barrier dysfunction: role of MLC phosphorylation. , 2001, American journal of physiology. Lung cellular and molecular physiology.

[28]  Ricky W. Johnstone,et al.  Histone-deacetylase inhibitors: novel drugs for the treatment of cancer , 2002, Nature Reviews Drug Discovery.

[29]  H. Brem,et al.  Paclitaxel: a review of adverse toxicities and novel delivery strategies , 2007, Expert opinion on drug safety.

[30]  B. Mickey,et al.  Rigidity of microtubules is increased by stabilizing agents , 1995, The Journal of cell biology.

[31]  Nathan Cermak,et al.  Characterizing deformability and surface friction of cancer cells , 2013, Proceedings of the National Academy of Sciences.

[32]  Donald E. Ingber,et al.  Jcb: Article Introduction , 2002 .

[33]  C. Waterman-Storer,et al.  Conserved microtubule–actin interactions in cell movement and morphogenesis , 2003, Nature Cell Biology.

[34]  C. Lipschultz,et al.  Cytotoxic studies of paclitaxel (Taxol) in human tumour cell lines. , 1993, British Journal of Cancer.

[35]  Julie A. Theriot,et al.  Mechanism of shape determination in motile cells , 2008, Nature.

[36]  Thomas D. Pollard,et al.  Actin, a Central Player in Cell Shape and Movement , 2009, Science.

[37]  S. Collins,et al.  The HL-60 promyelocytic leukemia cell line: proliferation, differentiation, and cellular oncogene expression. , 1987, Blood.

[38]  Horst Wenck,et al.  Stiffening of human skin fibroblasts with age. , 2012, Clinics in plastic surgery.

[39]  D. Begg,et al.  Concentration-dependent effects of cytochalasin D on tight junctions and actin filaments in MDCK epithelial cells. , 1994, Journal of cell science.

[40]  Anne Straube,et al.  Mechanical properties of doubly stabilized microtubule filaments. , 2013, Biophysical journal.

[41]  D. Weitz,et al.  Mechanical properties of Xenopus egg cytoplasmic extracts. , 2005, Biophysical journal.

[42]  Ben Fabry,et al.  Microconstriction arrays for high-throughput quantitative measurements of cell mechanical properties. , 2015, Biophysical journal.

[43]  Oliver Otto,et al.  Mechanical phenotyping of primary human skeletal stem cells in heterogeneous populations by real-time deformability cytometry. , 2016, Integrative biology : quantitative biosciences from nano to macro.

[44]  Guillaume Charras,et al.  Actin cortex mechanics and cellular morphogenesis. , 2012, Trends in cell biology.

[45]  Stefan Schinkinger,et al.  Quantifying the contribution of actin networks to the elastic strength of fibroblasts. , 2006, Journal of theoretical biology.

[46]  Stefan Schinkinger,et al.  Optical deformability as an inherent cell marker for testing malignant transformation and metastatic competence. , 2005, Biophysical journal.

[47]  L. Forró,et al.  Superficial and deep changes of cellular mechanical properties following cytoskeleton disassembly. , 2005, Cell motility and the cytoskeleton.

[48]  L. Cramer Role of actin-filament disassembly in lamellipodium protrusion in motile cells revealed using the drug jasplakinolide , 1999, Current Biology.

[49]  Minoru Yoshida,et al.  [Potent and specific inhibition of mammalian histone deacetylase both in vivo and in vitro by trichostatin A]. , 1990, Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme.

[50]  Daniel A. Fletcher,et al.  Cell mechanics and the cytoskeleton , 2010, Nature.

[51]  G. Nash,et al.  Actin polymerisation regulates integrin-mediated adhesion as well as rigidity of neutrophils. , 1997, Biochemical and biophysical research communications.

[52]  Dimitrije Stamenović,et al.  Microtubules may harden or soften cells, depending of the extent of cell distension. , 2005, Journal of biomechanics.

[53]  A. Holzinger Jasplakinolide: an actin-specific reagent that promotes actin polymerization. , 2009, Methods in molecular biology.

[54]  Bootstrap Methods and Permutation Tests * , 2022 .

[55]  R. May,et al.  Phagocytosis and the actin cytoskeleton. , 2001, Journal of cell science.

[56]  K. Gull,et al.  The interaction of benzimidazole carbamates with mammalian microtobule protein. , 1979, Biochemical pharmacology.

[57]  V. Moy,et al.  Mechanical properties of L929 cells measured by atomic force microscopy: effects of anticytoskeletal drugs and membrane crosslinking. , 2006, Scanning.

[58]  R. Hochmuth,et al.  Micropipette aspiration of living cells. , 2000, Journal of biomechanics.

[59]  Daniel A Fletcher,et al.  Analyzing cell mechanics in hematologic diseases with microfluidic biophysical flow cytometry. , 2008, Lab on a chip.

[60]  C Rotsch,et al.  Drug-induced changes of cytoskeletal structure and mechanics in fibroblasts: an atomic force microscopy study. , 2000, Biophysical journal.

[61]  M. Grever,et al.  Jasplakinolide's inhibition of the growth of prostate carcinoma cells in vitro with disruption of the actin cytoskeleton. , 1995, Journal of the National Cancer Institute.

[62]  Paolo P. Provenzano,et al.  Mechanical signaling through the cytoskeleton regulates cell proliferation by coordinated focal adhesion and Rho GTPase signaling , 2011, Journal of Cell Science.

[63]  E. Elson,et al.  Effects of cytochalasin D and latrunculin B on mechanical properties of cells. , 2001, Journal of cell science.

[64]  J. Spudich,et al.  Cytochalasin inhibits the rate of elongation of actin filament fragments , 1979, The Journal of cell biology.

[65]  E. Mazur,et al.  Nucleation and Transport Organize Microtubules in Metaphase Spindles , 2012, Cell.

[66]  J. Theriot,et al.  Crawling toward a unified model of cell mobility: spatial and temporal regulation of actin dynamics. , 2004, Annual review of biochemistry.

[67]  Tarik Bourouina,et al.  Nuclear deformation during breast cancer cell transmigration. , 2012, Lab on a chip.

[68]  K. V. Van Vliet,et al.  Chemoenvironmental modulators of fluidity in the suspended biological cell. , 2014, Soft matter.

[69]  Dino Di Carlo,et al.  Hydrodynamic stretching of single cells for large population mechanical phenotyping , 2012, Proceedings of the National Academy of Sciences.

[70]  M. Jordan,et al.  Effects of vinblastine, podophyllotoxin and nocodazole on mitotic spindles. Implications for the role of microtubule dynamics in mitosis. , 1992, Journal of cell science.

[71]  R. McMeeking,et al.  On the role of the actin cytoskeleton and nucleus in the biomechanical response of spread cells. , 2014, Biomaterials.