Independent component analysis-based classification of Alzheimer's MRI data

There is an unmet medical need to identify neuroimaging biomarkers that is able to accurately diagnose and monitor Alzheimer's disease (AD) at very early stages and assess the response to AD-modifying therapies. To a certain extent, volumetric and functional magnetic resonance imaging (fMRI) studies can detect changes in structure, cerebral blood flow and blood oxygenation that are able to distinguish AD and mild cognitive impairment (MCI) subjects from normal controls. However, it has been challenging to use fully automated MRI analytic methods to identify potential AD neuroimaging biomarkers. We have thus proposed a method based on independent component analysis (ICA), for studying potential AD-related MR image features, coupled with the use of support vector machine (SVM) for classifying scans into categories of AD, MCI, and normal control (NC) subjects. The MRI data were selected from Open Access Series of Imaging Studies (OASIS) and the Alzheimer's Disease Neuroimaging Initiative (ADNI) databases. The experimental results showed that our ICA-based method can differentiate AD and MCI subjects from normal controls, although further methodological improvement in the analytic method and inclusion of additional variables may be required for optimal classification.

[1]  Yalin Wang,et al.  Disease classification with hippocampal shape invariants , 2009, Hippocampus.

[2]  H. Braak,et al.  Neuropathology of Alzheimer’s Disease , 2004 .

[3]  Nick C Fox,et al.  Automatic classification of MR scans in Alzheimer's disease. , 2008, Brain : a journal of neurology.

[4]  Manuel Graña,et al.  Classification Results of Artificial Neural Networks for Alzheimer's Disease Detection , 2009, IDEAL.

[5]  V. Calhoun,et al.  Source‐based morphometry: The use of independent component analysis to identify gray matter differences with application to schizophrenia , 2009, Human brain mapping.

[6]  H. Benali,et al.  Support vector machine-based classification of Alzheimer’s disease from whole-brain anatomical MRI , 2009, Neuroradiology.

[7]  Lai Xu,et al.  Joint source based morphometry identifies linked gray and white matter group differences , 2009, NeuroImage.

[8]  Nick C Fox,et al.  The Alzheimer's disease neuroimaging initiative (ADNI): MRI methods , 2008, Journal of magnetic resonance imaging : JMRI.

[9]  Karl J. Friston,et al.  Voxel-Based Morphometry—The Methods , 2000, NeuroImage.

[10]  T. Sejnowski,et al.  Human Brain Mapping 6:368–372(1998) � Independent Component Analysis of fMRI Data: Examining the Assumptions , 2022 .

[11]  Seungjin Choi,et al.  Independent Component Analysis , 2009, Handbook of Natural Computing.

[12]  Michael Weiner,et al.  Tensor-based morphometry as a neuroimaging biomarker for Alzheimer's disease: An MRI study of 676 AD, MCI, and normal subjects , 2008, NeuroImage.

[13]  Nicolas Cherbuin,et al.  Hippocampal shape analysis for Alzheimer's disease using an efficient hypothesis test and regularized discriminative deformation , 2009, Hippocampus.

[14]  V D Calhoun,et al.  Spatial and temporal independent component analysis of functional MRI data containing a pair of task‐related waveforms , 2001, Human brain mapping.

[15]  H. Braak,et al.  Staging of Alzheimer-related cortical destruction. , 1997, International psychogeriatrics.

[16]  Aapo Hyvärinen,et al.  Fast and robust fixed-point algorithms for independent component analysis , 1999, IEEE Trans. Neural Networks.

[17]  H. Benali,et al.  Fully automatic hippocampus segmentation and classification in Alzheimer's disease and mild cognitive impairment applied on data from ADNI , 2009, Hippocampus.

[18]  William Stafford Noble,et al.  Support vector machine , 2013 .

[19]  A. Dale,et al.  Combining MR Imaging, Positron-Emission Tomography, and CSF Biomarkers in the Diagnosis and Prognosis of Alzheimer Disease , 2010, American Journal of Neuroradiology.

[20]  R. Sperling,et al.  Functional MRI Studies of Associative Encoding in Normal Aging, Mild Cognitive Impairment, and Alzheimer's Disease , 2007, Annals of the New York Academy of Sciences.

[21]  Manuel Graña,et al.  On the Use of Morphometry Based Features for Alzheimer's Disease Detection on MRI , 2009, IWANN.

[22]  C. Jack,et al.  MR‐based hippocampal volumetry in the diagnosis of Alzheimer's disease , 1992, Neurology.

[23]  John G. Csernansky,et al.  Open Access Series of Imaging Studies (OASIS): Cross-sectional MRI Data in Young, Middle Aged, Nondemented, and Demented Older Adults , 2007, Journal of Cognitive Neuroscience.

[24]  Heng Tao Shen,et al.  Principal Component Analysis , 2009, Encyclopedia of Biometrics.

[25]  I D Wilkinson,et al.  Comparison of manual direct and automated indirect measurement of hippocampus using magnetic resonance imaging. , 2008, European journal of radiology.