FlyMine: an integrated database for Drosophila and Anopheles genomics
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Julie M. Sullivan | Mark E. Woodbridge | K. Mizuguchi | M. Ashburner | S. Russell | D. Rana | Kim M Rutherford | R. Lyne | H. Janssens | G. Micklem | K. Lilley | Richard N. Smith | M. Wakeling | X. Watkins | P. McLaren | Andrew Varley | Francois Guillier | Wenyan Ji | Philip North | Tom A. D. Riley | J. Sullivan | Xavier Watkins
[1] Jing Wang,et al. Using FlyAtlas to identify better Drosophila models of human disease , 2008 .
[2] Chris Mungall,et al. A Chado case study: an ontology-based modular schema for representing genome-associated biological information , 2007, ISMB/ECCB.
[3] J. Dow,et al. Using FlyAtlas to identify better Drosophila melanogaster models of human disease , 2007, Nature Genetics.
[4] Christopher J. Rawlings,et al. Graph-based analysis and visualization of experimental results with ONDEX , 2006, Bioinform..
[5] J. Kinet,et al. CRACM1 Is a Plasma Membrane Protein Essential for Store-Operated Ca2+ Entry , 2006, Science.
[6] Long Li,et al. REDfly: a Regulatory Element Database for Drosophila , 2006, Bioinform..
[7] Cathy H. Wu,et al. The Universal Protein Resource (UniProt): an expanding universe of protein information , 2005, Nucleic Acids Res..
[8] Andreas Prlic,et al. Ensembl 2006 , 2005, Nucleic Acids Res..
[9] Lincoln Stein,et al. Reactome: a knowledgebase of biological pathways , 2004, Nucleic Acids Res..
[10] Priyanka Gupta,et al. BioWarehouse: a bioinformatics database warehouse toolkit , 2006, BMC Bioinformatics.
[11] Golan Yona,et al. BIOZON: a system for unification, management and analysis of heterogeneous biological data , 2006, BMC Bioinformatics.
[12] Norbert Perrimon,et al. Genome-Wide RNAi Screen for Host Factors Required for Intracellular Bacterial Infection , 2005, Science.
[13] Norbert Perrimon,et al. Drosophila RNAi Screen Reveals CD36 Family Member Required for Mycobacterial Infection , 2005, Science.
[14] Norbert Perrimon,et al. Genome-wide RNAi analysis of JAK/STAT signaling components in Drosophila. , 2005, Genes & development.
[15] T. Barrette,et al. Probabilistic model of the human protein-protein interaction network , 2005, Nature Biotechnology.
[16] N. Perrimon,et al. Functional Genomic Analysis of the Wnt-Wingless Signaling Pathway , 2005, Science.
[17] Casey M. Bergman,et al. Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster , 2005, Bioinform..
[18] R. Chanet,et al. Protein interaction mapping: a Drosophila case study. , 2005, Genome research.
[19] Cathy H. Wu,et al. InterPro, progress and status in 2005 , 2004, Nucleic Acids Res..
[20] Madeline A. Crosby,et al. FlyBase: genes and gene models , 2004, Nucleic Acids Res..
[21] Erik L. L. Sonnhammer,et al. Inparanoid: a comprehensive database of eukaryotic orthologs , 2004, Nucleic Acids Res..
[22] R. Durbin,et al. The Sequence Ontology: a tool for the unification of genome annotations , 2005, Genome Biology.
[23] Tao Xu,et al. Atlas – a data warehouse for integrative bioinformatics , 2005, BMC Bioinformatics.
[24] Bernardo A Mangiola,et al. A Drosophila protein-interaction map centered on cell-cycle regulators , 2004, Genome Biology.
[25] Norbert Perrimon,et al. Parallel Chemical Genetic and Genome-Wide RNAi Screens Identify Cytokinesis Inhibitors and Targets , 2004, PLoS biology.
[26] A. Fraser,et al. A first-draft human protein-interaction map , 2004, Genome Biology.
[27] M. Gerstein,et al. Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs. , 2004, Genome research.
[28] N. Perrimon,et al. Genome-Wide RNAi Analysis of Growth and Viability in Drosophila Cells , 2004, Science.
[29] C. Sander,et al. The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data , 2004, Nature Biotechnology.
[30] S. L. Wong,et al. A Map of the Interactome Network of the Metazoan C. elegans , 2004, Science.
[31] E. Birney,et al. EnsMart: a generic system for fast and flexible access to biological data. , 2003, Genome research.
[32] M. Gerstein,et al. Integration of genomic datasets to predict protein complexes in yeast , 2004, Journal of Structural and Functional Genomics.
[33] James R. Knight,et al. A Protein Interaction Map of Drosophila melanogaster , 2003, Science.
[34] Brian E Snydsman,et al. Assigning function to yeast proteins by integration of technologies. , 2003, Molecular cell.
[35] Andrew Hayes,et al. GIMS: an integrated data storage and analysis environment for genomic and functional data , 2003, Yeast.
[36] M. Vidal,et al. Integrating 'omic' information: a bridge between genomics and systems biology. , 2003, Trends in genetics : TIG.
[37] Andrew G Fraser,et al. Genome-Wide RNAi of C. elegans Using the Hypersensitive rrf-3 Strain Reveals Novel Gene Functions , 2003, PLoS biology.
[38] Y. Dong,et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi , 2003, Nature.
[39] Carlos Alberto Heuser,et al. Integrating Biological Databases , 2003, SBBD.
[40] L. Wong,et al. Technologies for Integrating Biological Data , 2002, Briefings Bioinform..
[41] Mark D. Wilkinson,et al. BioMOBY: An Open Source Biological Web Services Proposal , 2002, Briefings Bioinform..
[42] Marc Vidal,et al. Integrating Interactome, Phenome, and Transcriptome Mapping Data for the C. elegans Germline , 2002, Current Biology.
[43] S. Lewis,et al. The generic genome browser: a building block for a model organism system database. , 2002, Genome research.
[44] B. S. Baker,et al. Gene Expression During the Life Cycle of Drosophila melanogaster , 2002, Science.
[45] Jason E. Stewart,et al. Design and implementation of microarray gene expression markup language (MAGE-ML) , 2002, Genome Biology.
[46] P. Kemmeren,et al. Protein interaction verification and functional annotation by integrated analysis of genome-scale data. , 2002, Molecular cell.
[47] M. Gerstein,et al. Integrating Interactomes , 2002, Science.
[48] Gary D Bader,et al. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry , 2002, Nature.
[49] P. Bork,et al. Functional organization of the yeast proteome by systematic analysis of protein complexes , 2002, Nature.
[50] M. Vidal,et al. Combined Functional Genomic Maps of the C. elegans DNA Damage Response , 2002, Science.
[51] Michael Gribskov,et al. Homophila: human disease gene cognates in Drosophila , 2002, Nucleic Acids Res..
[52] M. Gerstein,et al. Relating whole-genome expression data with protein-protein interactions. , 2002, Genome research.
[53] M. Vidal,et al. Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs". , 2001, Genome research.
[54] G. Church,et al. Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae , 2001, Nature Genetics.
[55] A. Grigoriev. A relationship between gene expression and protein interactions on the proteome scale: analysis of the bacteriophage T7 and the yeast Saccharomyces cerevisiae. , 2001, Nucleic acids research.
[56] R. Ozawa,et al. A comprehensive two-hybrid analysis to explore the yeast protein interactome , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[57] Laura M. Haas,et al. DiscoveryLink: A system for integrated access to life sciences data sources , 2001, IBM Syst. J..
[58] Carole A. Goble,et al. Transparent access to multiple bioinformatics information sources , 2001, IBM Syst. J..
[59] Val Tannen,et al. K2/Kleisli and GUS: Experiments in integrated access to genomic data sources , 2001, IBM Syst. J..
[60] P. Zipperlen,et al. Functional genomic analysis of C. elegans chromosome I by systematic RNA interference , 2000, Nature.
[61] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[62] James R. Knight,et al. A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae , 2000, Nature.
[63] T. Ito,et al. Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[64] D. Eisenberg,et al. A combined algorithm for genome-wide prediction of protein function , 1999, Nature.
[65] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[66] Carole A. Goble,et al. TAMBIS: Transparent Access to Multiple Bioinformatics Information Sources , 1998, ISMB.
[67] Thure Etzold,et al. SRS - an indexing and retrieval tool for flat file data libraries , 1993, Comput. Appl. Biosci..