Zinc induces disorder-to-order transitions in free and membrane-associated Thellungiella salsuginea dehydrins TsDHN-1 and TsDHN-2: a solution CD and solid-state ATR-FTIR study

[1]  D. Hincha,et al.  A mitochondrial late embryogenesis abundant protein stabilizes model membranes in the dry state. , 2010, Biochimica et biophysica acta.

[2]  G. Harauz,et al.  Interactions of intrinsically disordered Thellungiella salsuginea dehydrins TsDHN-1 and TsDHN-2 with membranes - synergistic effects of lipid composition and temperature on secondary structure. , 2010, Biochemistry and cell biology = Biochimie et biologie cellulaire.

[3]  R. Seckler,et al.  Interaction of two intrinsically disordered plant stress proteins (COR15A and COR15B) with lipid membranes in the dry state. , 2010, Biochimica et biophysica acta.

[4]  Xiangbin Xu,et al.  Crucial roles of membrane stability and its related proteins in the tolerance of peach fruit to chilling injury , 2010, Amino Acids.

[5]  M. Pedras,et al.  Metabolic responses of Thellungiella halophila/salsuginea to biotic and abiotic stresses: metabolite profiles and quantitative analyses. , 2010, Phytochemistry.

[6]  G. Harauz,et al.  The interaction of zinc with membrane-associated 18.5 kDa myelin basic protein: an attenuated total reflectance-Fourier transform infrared spectroscopic study , 2010, Amino Acids.

[7]  Peter Tompa,et al.  Intrinsically disordered chaperones in plants and animals. , 2010, Biochemistry and cell biology = Biochimie et biologie cellulaire.

[8]  Vladimir N Uversky,et al.  Intrinsically Disordered Proteins and Their Environment: Effects of Strong Denaturants, Temperature, pH, Counter Ions, Membranes, Binding Partners, Osmolytes, and Macromolecular Crowding , 2009, The protein journal.

[9]  Predrag Radivojac,et al.  Influence of Sequence Changes and Environment on Intrinsically Disordered Proteins , 2009, PLoS Comput. Biol..

[10]  G. Harauz,et al.  The classic basic protein of myelin--conserved structural motifs and the dynamic molecular barcode involved in membrane adhesion and protein-protein interactions. , 2009, Current protein & peptide science.

[11]  T. Close,et al.  The K-Segment of Maize DHN1 Mediates Binding to Anionic Phospholipid Vesicles and Concomitant Structural Changes1[W][OA] , 2009, Plant Physiology.

[12]  M. Hara,et al.  DNA binding of citrus dehydrin promoted by zinc ion. , 2009, Plant, cell & environment.

[13]  J. Mouillon,et al.  Mimicking the Plant Cell Interior under Water Stress by Macromolecular Crowding: Disordered Dehydrin Proteins Are Highly Resistant to Structural Collapse1[W] , 2008, Plant Physiology.

[14]  A. Covarrubias,et al.  The Enigmatic LEA Proteins and Other Hydrophilins1[W] , 2008, Plant Physiology.

[15]  K. Kosová,et al.  Expression of dehydrin 5 during the development of frost tolerance in barley (Hordeum vulgare). , 2008, Journal of plant physiology.

[16]  P. Tompa,et al.  Chaperone Activity of ERD10 and ERD14, Two Disordered Stress-Related Plant Proteins1[OA] , 2008, Plant Physiology.

[17]  D. Hincha,et al.  LEA (Late Embryogenesis Abundant) proteins and their encoding genes in Arabidopsis thaliana , 2008, BMC Genomics.

[18]  Wei Wei,et al.  BjDHNs Confer Heavy-metal Tolerance in Plants , 2008, Molecular biotechnology.

[19]  George Harauz,et al.  Binding of the proline-rich segment of myelin basic protein to SH3 domains: spectroscopic, microarray, and modeling studies of ligand conformation and effects of posttranslational modifications. , 2008, Biochemistry.

[20]  K. Kosová,et al.  The role of dehydrins in plant response to cold , 2007, Biologia Plantarum.

[21]  L. Sweetlove.  Faculty Opinions recommendation of Structure and function of a mitochondrial late embryogenesis abundant protein are revealed by desiccation. , 2007 .

[22]  E. Beck,et al.  Specific and unspecific responses of plants to cold and drought stress , 2007, Journal of Biosciences.

[23]  M. Wise,et al.  The continuing conundrum of the LEA proteins , 2007, Naturwissenschaften.

[24]  B. Moffatt,et al.  Thellungiella: an Arabidopsis-related model plant adapted to cold temperatures. , 2007, Plant, cell & environment.

[25]  Christopher J. Oldfield,et al.  Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins. , 2007, Journal of proteome research.

[26]  A Keith Dunker,et al.  Functional anthology of intrinsic disorder. 2. Cellular components, domains, technical terms, developmental processes, and coding sequence diversities correlated with long disordered regions. , 2007, Journal of proteome research.

[27]  Christopher J. Oldfield,et al.  Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions. , 2007, Journal of proteome research.

[28]  A. Covarrubias,et al.  Proline-rich cell wall proteins accumulate in growing regions and phloem tissue in response to water deficit in common bean seedlings , 2007, Planta.

[29]  R. Ghirlando,et al.  Desiccation and Zinc Binding Induce Transition of Tomato Abscisic Acid Stress Ripening 1, a Water Stress- and Salt Stress-Regulated Plant-Specific Protein, from Unfolded to Folded State1[W][OA] , 2006, Plant Physiology.

[30]  P. Tompa,et al.  Protein-water and protein-buffer interactions in the aqueous solution of an intrinsically unstructured plant dehydrin: NMR intensity and DSC aspects. , 2006, Biophysical journal.

[31]  S. Rom,et al.  Mapping the DNA- and zinc-binding domains of ASR1 (abscisic acid stress ripening), an abiotic-stress regulated plant specific protein. , 2006, Biochimie.

[32]  S. Rajesh,et al.  Prediction of functions for two LEA proteins from mung bean , 2006, Bioinformation.

[33]  K. Itoh,et al.  Keap1 Recruits Neh2 through Binding to ETGE and DLG Motifs: Characterization of the Two-Site Molecular Recognition Model , 2006, Molecular and Cellular Biology.

[34]  P. Gustafsson,et al.  Structural Investigation of Disordered Stress Proteins. Comparison of Full-Length Dehydrins with Isolated Peptides of Their Conserved Segments1 , 2006, Plant Physiology.

[35]  L. Cong,et al.  Cloning and expression analysis of SKn-type dehydrin gene from bean in response to heavy metals , 2006, Molecular biotechnology.

[36]  P. Rey,et al.  Expression of SK3-type dehydrin in transporting organs is associated with cold acclimation in Solanum species , 2006, Planta.

[37]  M. Hara,et al.  Metal binding by citrus dehydrin with histidine-rich domains. , 2005, Journal of experimental botany.

[38]  G. B. Golding,et al.  Expressed sequence tags from the Yukon ecotype of Thellungiella reveal that gene expression in response to cold, drought and salinity shows little overlap , 2005, Plant Molecular Biology.

[39]  Ayelet Gilad,et al.  The water- and salt-stress-regulated Asr1 (abscisic acid stress ripening) gene encodes a zinc-dependent DNA-binding protein. , 2004, The Biochemical journal.

[40]  Heiko Schoof,et al.  Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome , 2004, BMC Genomics.

[41]  D. Galbraith,et al.  Salt Cress. A Halophyte and Cryophyte Arabidopsis Relative Model System and Its Applicability to Molecular Genetic Analyses of Growth and Development of Extremophiles1 , 2004, Plant Physiology.

[42]  M. Hara,et al.  Radical scavenging activity and oxidative modification of citrus dehydrin. , 2004, Plant physiology and biochemistry : PPB.

[43]  P. Mäkelä,et al.  Overexpression of Multiple Dehydrin Genes Enhances Tolerance to Freezing Stress in Arabidopsis , 2004, Plant Molecular Biology.

[44]  M. Alsheikh,et al.  Ion Binding Properties of the Dehydrin ERD14 Are Dependent upon Phosphorylation* , 2003, Journal of Biological Chemistry.

[45]  Ch. R. Allagulova,et al.  The Plant Dehydrins: Structure and Putative Functions , 2003, Biochemistry (Moscow).

[46]  T. Close,et al.  Cryoprotective activity of a cold-induced dehydrin purified from barley , 2003 .

[47]  P. Beckett,et al.  Purification of native dehydrin from Glycine Max cv., Pisum sativum, and Rosmarinum officinalis by affinity chromatography. , 2003, Protein expression and purification.

[48]  J. Cushman,et al.  Conformation of a Group 2 Late Embryogenesis Abundant Protein from Soybean. Evidence of Poly (l-Proline)-type II Structure1 , 2003, Plant Physiology.

[49]  E. K. Ueda,et al.  Current and prospective applications of metal ion-protein binding. , 2003, Journal of chromatography. A.

[50]  T. Close,et al.  The binding of Maize DHN1 to Lipid Vesicles. Gain of Structure and Lipid Specificity1 , 2003, Plant Physiology.

[51]  Elizabeth A. Smith,et al.  The Calcium-Binding Activity of a Vacuole-Associated, Dehydrin-Like Protein Is Regulated by Phosphorylation1 , 2002, Plant Physiology.

[52]  R. Hell,et al.  A Metal-binding Member of the Late Embryogenesis Abundant Protein Family Transports Iron in the Phloem ofRicinus communis L.* , 2002, The Journal of Biological Chemistry.

[53]  George D Rose,et al.  Polyproline II structure in a sequence of seven alanine residues , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[54]  J. Cushman,et al.  Temperature-Induced Extended Helix/Random Coil Transitions in a Group 1 Late Embryogenesis-Abundant Protein from Soybean1 , 2002, Plant Physiology.

[55]  M. Mizuguchi,et al.  Fourier-Transform Infrared Spectroscopic Study of Ca2+-Binding to Osteocalcin , 2001, Calcified Tissue International.

[56]  J. Grogan,et al.  Is salivary histatin 5 a metallopeptide? , 2001, Biochimica et biophysica acta.

[57]  W. Wolkers,et al.  Isolation and characterization of a D-7 LEA protein from pollen that stabilizes glasses in vitro. , 2001, Biochimica et biophysica acta.

[58]  T. Trunova,et al.  Lipid Composition of Tomato Leaves as Related to Plant Cold Tolerance , 2000, Russian Journal of Plant Physiology.

[59]  J. Svensson,et al.  Purification of recombinant Arabidopsis thaliana dehydrins by metal ion affinity chromatography. , 2000, Protein expression and purification.

[60]  A. Ulrich,et al.  The effect of Zn(2+) on the secondary structure of a histidine-rich fusogenic peptide and its interaction with lipid membranes. , 2000, Biochimica et biophysica acta.

[61]  T. Close,et al.  Expression of the barley dehydrin multigene family and the development of freezing tolerance , 2000, Molecular and General Genetics MGG.

[62]  A. Covarrubias,et al.  Highly Hydrophilic Proteins in Prokaryotes and Eukaryotes Are Common during Conditions of Water Deficit* , 2000, The Journal of Biological Chemistry.

[63]  C S Raman,et al.  Isothermal titration calorimetry of protein-protein interactions. , 1999, Methods.

[64]  T. Close,et al.  Purification and partial characterization of a dehydrin involved in chilling tolerance during seedling emergence of cowpea. , 1999, Plant physiology.

[65]  S. J. Gilmour,et al.  Mode of action of the COR15a gene on the freezing tolerance of Arabidopsis thaliana. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[66]  B. Fowler,et al.  Accumulation of an Acidic Dehydrin in the Vicinity of the Plasma Membrane during Cold Acclimation of Wheat , 1998, Plant Cell.

[67]  D. Hincha,et al.  The effects of chloroplast lipids on the stability of liposomes during freezing and drying. , 1998, Biochimica et biophysica acta.

[68]  T. Close,et al.  Dehydrins: genes, proteins, and associations with phenotypic traits , 1997 .

[69]  G. Labesse,et al.  Deciphering protein sequence information through hydrophobic cluster analysis (HCA): current status and perspectives , 1997, Cellular and Molecular Life Sciences CMLS.

[70]  T. Close.  Dehydrins: A commonalty in the response of plants to dehydration and low temperature , 1997 .

[71]  F. Frey,et al.  Interaction of plant lipids with 14 kDa phospholipase A2 enzymes. , 1996, The Biochemical journal.

[72]  H. Kalbitzer,et al.  The recombinant dehydrin-like desiccation stress protein from the resurrection plant Craterostigma plantagineum displays no defined three-dimensional structure in its native state. , 1996, Biological chemistry.

[73]  E. Wurtele,et al.  The embryo-specific EMB-1 protein of Daucus carota is flexible and unstructured in solution☆ , 1996 .

[74]  T. Close,et al.  Purification of a maize dehydrin protein expressed in Escherichia coli. , 1995, Protein expression and purification.

[75]  T. Close,et al.  Purification of a maize dehydrin. , 1994, Protein expression and purification.

[76]  H. Mantsch,et al.  Determination of protein secondary structure by Fourier transform infrared spectroscopy: a critical assessment. , 1993, Biochemistry.

[77]  J. Bandekar,et al.  Amide modes and protein conformation. , 1992, Biochimica et biophysica acta.

[78]  J F Brandts,et al.  Rapid measurement of binding constants and heats of binding using a new titration calorimeter. , 1989, Analytical biochemistry.

[79]  J. Mornon,et al.  Hydrophobic cluster analysis: An efficient new way to compare and analyse amino acid sequences , 1987, FEBS letters.

[80]  H. Susi,et al.  Examination of the secondary structure of proteins by deconvolved FTIR spectra , 1986, Biopolymers.

[81]  A. Amtmann.  Learning from evolution: Thellungiella generates new knowledge on essential and critical components of abiotic stress tolerance in plants. , 2009, Molecular plant.

[82]  N. Iusem,et al.  When cells lose water: Lessons from biophysics and molecular biology. , 2009, Progress in biophysics and molecular biology.

[83]  N. Hayashi,et al.  Interaction between the C-terminal region of human myelin basic protein and calmodulin: analysis of complex formation and solution structure , 2008, BMC Structural Biology.

[84]  M. Negishi,et al.  Characterization of specific donor binding to alpha1,4-N-acetylhexosaminyltransferase EXTL2 using isothermal titration calorimetry. , 2006, Methods in enzymology.

[85]  Alan R Davidson,et al.  The structure of “unstructured” regions in peptides and proteins: Role of the polyproline II helix in protein folding and recognition * , 2005, Biopolymers.

[86]  A. Velázquez‐Campoy,et al.  Characterization of protein-protein interactions by isothermal titration calorimetry. , 2004, Methods in molecular biology.

[87]  M. Wise,et al.  POPP the question: what do LEA proteins do? , 2004, Trends in plant science.

[88]  G. Galau,et al.  Changes in late-embryogenesis-abundant (LEA) messenger RNAs and dehydrins during maturation and premature drying ofRicinus communis L. seeds , 2004, Planta.

[89]  D. Hincha,et al.  Proteins from frost-hardy leaves protect thylakoids against mechanical freeze-thaw damage in vitro , 2004, Planta.

[90]  Robert W Woody,et al.  Is polyproline II a major backbone conformation in unfolded proteins? , 2002, Advances in protein chemistry.

[91]  A. Ivanova,et al.  CHANGES IN LIPID COMPOSITION OF Phaseolus vulgaris LEAVES AFTER SIMULATING ACID RAIN TREATMENT , 2002 .

[92]  P. Brown,et al.  DNA arrays for analysis of gene expression. , 1999, Methods in enzymology.

[93]  B. Vallee,et al.  Zinc metallochemistry in biochemistry. , 1995, EXS.

[94]  M. Tanokura,et al.  A comparative study of the binding effects of Mg2+, Ca2+, Sr2+, and Cd2+ on calmodulin by fourier‐transform infrared spectroscopy , 1995 .

[95]  F. Goñi,et al.  Quantitative studies of the structure of proteins in solution by Fourier-transform infrared spectroscopy. , 1993, Progress in biophysics and molecular biology.

[96]  H. Mantsch,et al.  New insight into protein secondary structure from resolution-enhanced infrared spectra. , 1988, Biochimica et biophysica acta.

[97]  P. Stumpf.  Lipids : structure and function , 1987 .

[98]  J. Bandekar,et al.  Vibrational spectroscopy and conformation of peptides, polypeptides, and proteins. , 1986, Advances in protein chemistry.

[99]  J. Harwood.  Plant Acyl Lipids: Structure, Distribution, and Analysis , 1980 .