Identification of sites of 2′-O-methylation vulnerability in human ribosomal RNAs by systematic mapping
暂无分享,去创建一个
Yuri Motorin | Virginie Marchand | Sunny Sharma | D. Lafontaine | Sunny Sharma | V. Marchand | Y. Motorin | Denis L J Lafontaine
[1] J. Dinman,et al. Optimization of Ribosome Structure and Function by rRNA Base Modification , 2007, PloS one.
[2] K. Kinzler,et al. Requirement for p53 and p21 to sustain G2 arrest after DNA damage. , 1998, Science.
[3] K. Entian,et al. Partial Methylation at Am100 in 18S rRNA of Baker's Yeast Reveals Ribosome Heterogeneity on the Level of Eukaryotic rRNA Modification , 2014, PloS one.
[4] Wei Xu,et al. Impaired Control of IRES-Mediated Translation in X-Linked Dyskeratosis Congenita , 2006, Science.
[5] Schraga Schwartz,et al. Next-generation sequencing technologies for detection of modified nucleotides in RNAs , 2016, RNA biology.
[6] S. Goldman,et al. The human box C/D snoRNAs U3 and U8 are required for pre-rRNA processing and tumorigenesis , 2016, Oncotarget.
[7] H. Urlaub,et al. Assembly and maturation of the U3 snoRNP in the nucleoplasm in a large dynamic multiprotein complex. , 2004, Molecular cell.
[8] Shifeng Xue,et al. Specialized ribosomes: a new frontier in gene regulation and organismal biology , 2012, Nature Reviews Molecular Cell Biology.
[9] D. Lafontaine,et al. 'View From A Bridge': A New Perspective on Eukaryotic rRNA Base Modification. , 2015, Trends in biochemical sciences.
[10] Yuri Motorin,et al. RNA nucleotide methylation , 2011, Wiley interdisciplinary reviews. RNA.
[11] Jan Gorodkin,et al. Profiling of ribose methylations in RNA by high-throughput sequencing. , 2014, Angewandte Chemie.
[12] D. Tollervey,et al. The small nucleolar RNP protein NOP1 (fibrillarin) is required for pre‐rRNA processing in yeast. , 1991, The EMBO journal.
[13] B. Klaholz,et al. Structure of the human 80S ribosome , 2015, Nature.
[14] Francesco Neri,et al. High-throughput single-base resolution mapping of RNA 2΄-O-methylated residues , 2016, Nucleic acids research.
[15] Anders H. Lund,et al. Profiling of 2′-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity , 2016, Nucleic acids research.
[16] Christopher J. Nelson,et al. Glutamine methylation in Histone H2A is an RNA Polymerase I dedicated modification , 2013, Nature.
[17] P. Yelick,et al. Ribosomopathies: Global process, tissue specific defects , 2015, Rare diseases.
[18] J. Saurin,et al. p53 Acts as a Safeguard of Translational Control by Regulating Fibrillarin and rRNA Methylation in Cancer , 2013, Cancer Cell.
[19] T. Steitz,et al. Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly , 2015, Nature Structural &Molecular Biology.
[20] M. Barna,et al. Translating the genome in time and space: specialized ribosomes, RNA regulons, and RNA-binding proteins. , 2015, Annual review of cell and developmental biology.
[21] L. Tafforeau,et al. The complexity of human ribosome biogenesis revealed by systematic nucleolar screening of Pre-rRNA processing factors. , 2013, Molecular cell.
[22] P. Limbach,et al. Going global: the new era of mapping modifications in RNA , 2017, Wiley interdisciplinary reviews. RNA.
[23] J. Dinman. Pathways to Specialized Ribosomes: The Brussels Lecture. , 2016, Journal of Molecular Biology.
[24] I. Thompson,et al. Elevated snoRNA biogenesis is essential in breast cancer , 2014, Oncogene.
[25] A. Burlingame,et al. H/ACA small RNA dysfunctions in disease reveal key roles for noncoding RNA modifications in hematopoietic stem cell differentiation. , 2013, Cell reports.
[26] K. Entian,et al. Yeast Kre33 and human NAT10 are conserved 18S rRNA cytosine acetyltransferases that modify tRNAs assisted by the adaptor Tan1/THUMPD1 , 2015, Nucleic acids research.
[27] V. Marcel,et al. p53, a translational regulator: contribution to its tumour-suppressor activity , 2015, Oncogene.
[28] D. Tollervey,et al. Yeast Pre-rRNA Processing and Modification Occur Cotranscriptionally , 2010, Molecular cell.
[29] Lan Wang,et al. RiboVision suite for visualization and analysis of ribosomes. , 2014, Faraday discussions.
[30] P. Stadler,et al. An updated human snoRNAome , 2016, Nucleic acids research.
[31] D. Ruggero,et al. Small RNAs with big implications: new insights into H/ACA snoRNA function and their role in human disease , 2015, Wiley interdisciplinary reviews. RNA.
[32] Davide Ruggero,et al. rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells. , 2011, Molecular cell.
[33] D. Lafontaine,et al. Mapping the cleavage sites on mammalian pre-rRNAs: where do we stand? , 2012, Biochimie.
[34] D. Lafontaine,et al. Noncoding RNAs in eukaryotic ribosome biogenesis and function , 2015, Nature Structural &Molecular Biology.
[35] W. Gilbert,et al. Messenger RNA modifications: Form, distribution, and function , 2016, Science.
[36] T. Steitz. A structural understanding of the dynamic ribosome machine , 2008, Nature Reviews Molecular Cell Biology.
[37] A. Chakraborty,et al. Loss of ribosomal RNA modification causes developmental defects in zebrafish , 2011, Nucleic acids research.
[38] M. Bohnsack,et al. The box C/D and H/ACA snoRNPs: key players in the modification, processing and the dynamic folding of ribosomal RNA , 2012, Wiley interdisciplinary reviews. RNA.
[39] N. Danilova,et al. Ribosomopathies: how a common root can cause a tree of pathologies , 2015, Disease Models & Mechanisms.
[40] M. Fournier,et al. rRNA modifications in an intersubunit bridge of the ribosome strongly affect both ribosome biogenesis and activity. , 2007, Molecular cell.
[41] Yuri Motorin,et al. Illumina-based RiboMethSeq approach for mapping of 2′-O-Me residues in RNA , 2016, Nucleic acids research.
[42] M. Fournier,et al. Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center. , 2003, Molecular cell.
[43] D. Lafontaine,et al. Involvement of human ribosomal proteins in nucleolar structure and p53-dependent nucleolar stress , 2016, Nature Communications.
[44] J. Rousset,et al. Ribosome Performance Is Enhanced by a Rich Cluster of Pseudouridines in the A-site Finger Region of the Large Subunit* , 2008, Journal of Biological Chemistry.
[45] Masato Taoka,et al. The complete chemical structure of Saccharomyces cerevisiae rRNA: partial pseudouridylation of U2345 in 25S rRNA by snoRNA snR9 , 2016, Nucleic acids research.
[46] K. Entian,et al. Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function , 2016, RNA biology.
[47] J. Rousset,et al. Nucleotide modifications in three functionally important regions of the Saccharomyces cerevisiae ribosome affect translation accuracy , 2009, Nucleic acids research.
[48] M. Taoka,et al. A mass spectrometry-based method for comprehensive quantitative determination of post-transcriptional RNA modifications: the complete chemical structure of Schizosaccharomyces pombe ribosomal RNAs , 2015, Nucleic acids research.