Complete Genome Sequence of Coprothermobacter proteolyticus DSM 5265

ABSTRACT Here we present the complete 1,424,912-bp genome sequence of Coprothermobacter proteolyticus DSM 5265, isolated from a thermophilic digester fermenting tannery wastes and cattle manure.

[1]  Frederick Albert Matsen IV,et al.  PhyloSift: phylogenetic analysis of genomes and metagenomes , 2014, PeerJ.

[2]  J. Eisen,et al.  Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups , 2013, PloS one.

[3]  L. Holm,et al.  The Pfam protein families database , 2005, Nucleic Acids Res..

[4]  E. Birney,et al.  Pfam: the protein families database , 2013, Nucleic Acids Res..

[5]  Samuel V. Angiuoli,et al.  Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation. , 2008, Omics : a journal of integrative biology.

[6]  Phat L Tran,et al.  Metabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters , 2006, PLoS biology.

[7]  Rekha Seshadri,et al.  The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough , 2004, Nature Biotechnology.

[8]  O. White,et al.  Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis , 2002, Nature Biotechnology.

[9]  Fan Yang,et al.  TIGRFAMs: a protein family resource for the functional identification of proteins , 2001, Nucleic Acids Res..

[10]  Eugene W. Myers,et al.  A whole-genome assembly of Drosophila. , 2000, Science.

[11]  S. Salzberg,et al.  Optimized multiplex PCR: efficiently closing a whole-genome shotgun sequencing project. , 1999, Genomics.

[12]  J. Lobry.  Asymmetric substitution patterns in the two DNA strands of bacteria. , 1996, Molecular biology and evolution.

[13]  Manuel G. Claros,et al.  TopPred II: an improved software for membrane protein structure predictions , 1994, Comput. Appl. Biosci..

[14]  E. Stackebrandt,et al.  Transfer of the Type Species of the Genus Thermobacteroides to the Genus Thermoanaerobacter as Thermoanaerobacter acetoethylicus(Ben-Bassat and Zeikus 1981) comb. nov., Description of Coprothermobacter gen. nov., and Reclassification of Thermobacteroides proteolyticus as Coprothermobacter proteolyti , 1993 .

[15]  D. Boone,et al.  Emendation of the Genus Thermobacteroides: Thermobacteroides proteolyticus sp. nov., a Proteolytic Acetogen from a Methanogenic Enrichment , 1985 .