Polymerases and the Replisome: Machines within Machines
暂无分享,去创建一个
[1] S. Wickner,et al. Genetics and enzymology of DNA replication in Escherichia coli. , 1992, Annual review of genetics.
[2] L. Drury,et al. The Cdc4/34/53 pathway targets Cdc6p for proteolysis in budding yeast , 1997, The EMBO journal.
[3] Ina Ruck,et al. USA , 1969, The Lancet.
[4] John Kuriyan,et al. Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA , 1994, Cell.
[5] T. Steitz,et al. Cocrystal structure of an editing complex of Klenow fragment with DNA. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[6] M. O’Donnell,et al. Replisome Assembly Reveals the Basis for Asymmetric Function in Leading and Lagging Strand Replication , 1996, Cell.
[7] B. Stillman,et al. Replication factors required for SV40 DNA replication in vitro. I. DNA structure-specific recognition of a primer-template junction by eukaryotic DNA polymerases and their accessory proteins. , 1991, The Journal of biological chemistry.
[8] L. Bird,et al. Crystal structure of a DExx box DNA helicase , 1996, Nature.
[9] J. Diffley,et al. ORC‐ and Cdc6‐dependent complexes at active and inactive chromosomal replication origins in Saccharomyces cerevisiae. , 1996, The EMBO journal.
[10] C. Georgopoulos,et al. Initiation of lambda DNA replication. The Escherichia coli small heat shock proteins, DnaJ and GrpE, increase DnaK's affinity for the lambda P protein. , 1993, The Journal of biological chemistry.
[11] R. Fotedar,et al. Cell cycle control of DNA replication. , 1995, Progress in cell cycle research.
[12] Z. Kelman,et al. Clamp loading, unloading and intrinsic stability of the PCNA, β and gp45 sliding clamps of human, E. coli and T4 replicases , 1996, Genes to cells : devoted to molecular & cellular mechanisms.
[13] Bruce Stillman,et al. ORC and Cdc6p interact and determine the frequency of initiation of DNA replication in the genome , 1995, Cell.
[14] Edward H. Egelman,et al. The hexameric E. coli DnaB helicase can exist in different Quaternary states. , 1996, Journal of molecular biology.
[15] Bruce Stillman,et al. ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex , 1992, Nature.
[16] T. Steitz,et al. DNA POLYMERASE FROM BACTERIOPHAGE RB69 , 1998 .
[17] J. Diffley,et al. Two steps in the assembly of complexes at yeast replication origins in vivo , 1994, Cell.
[18] M. Lieber. The FEN‐1 family of structure‐specific nucleases in eukaryotic dna replication, recombination and repair , 1997, BioEssays : news and reviews in molecular, cellular and developmental biology.
[19] A. Leonard,et al. Cell cycle‐specific changes in nucleoprotein complexes at a chromosomal replication origin. , 1995, The EMBO journal.
[20] M. Jezewska,et al. Oligomeric structure of Escherichia coli primary replicative helicase DnaB protein. , 1994, The Journal of biological chemistry.
[21] Y. Ishimi. A DNA Helicase Activity Is Associated with an MCM4, -6, and -7 Protein Complex* , 1997, The Journal of Biological Chemistry.
[22] S. Bell,et al. Coordinate Binding of ATP and Origin DNA Regulates the ATPase Activity of the Origin Recognition Complex , 1997, Cell.
[23] B. Stillman,et al. Sequential initiation of lagging and leading strand synthesis by two different polymerase complexes at the SV40 DNA replication origin , 1990, Nature.
[24] K. Marians. Helicase structures: a new twist on DNA unwinding. , 1997, Structure.
[25] M. Lieber,et al. Lagging Strand DNA Synthesis at the Eukaryotic Replication Fork Involves Binding and Stimulation of FEN-1 by Proliferating Cell Nuclear Antigen (*) , 1995, The Journal of Biological Chemistry.
[26] A. Kornberg,et al. Opening of the replication origin of Escherichia coli by DnaA protein with protein HU or IHF. , 1992, The Journal of biological chemistry.
[27] T. Kelly,et al. The role of the 70 kDa subunit of human DNA polymerase alpha in DNA replication. , 1993, The EMBO journal.
[28] P. V. von Hippel,et al. A coupled complex of T4 DNA replication helicase (gp41) and polymerase (gp43) can perform rapid and processive DNA strand-displacement synthesis. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[29] S. Um,et al. Cryptic single-stranded-DNA binding activities of the phage lambda P and Escherichia coli DnaC replication initiation proteins facilitate the transfer of E. coli DnaB helicase onto DNA. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[30] H. Echols,et al. Function of the GrpE heat shock protein in bidirectional unwinding and replication from the origin of phage lambda. , 1993, The Journal of biological chemistry.
[31] J. Kuriyan,et al. Sliding clamps of DNA polymerases. , 1993, Journal of molecular biology.
[32] A. Kornberg,et al. ATP activates dnaA protein in initiating replication of plasmids bearing the origin of the E. coli chromosome , 1987, Cell.
[33] S. Bell,et al. Initiation of DNA replication in eukaryotic cells. , 1997, Annual review of cell and developmental biology.
[34] J M Carazo,et al. A structural model for the Escherichia coli DnaB helicase based on electron microscopy data. , 1995, Journal of structural biology.
[35] P. Silver,et al. DnaJ/hsp40 chaperone domain of SV40 large T antigen promotes efficient viral DNA replication. , 1997, Genes & development.
[36] T. Kelly,et al. Effects of T antigen and replication protein A on the initiation of DNA synthesis by DNA polymerase alpha-primase , 1991, Molecular and cellular biology.
[37] J. Blow,et al. The Xenopus origin recognition complex is essential for DNA replication and MCM binding to chromatin , 1996, Current Biology.
[38] S. Chen,et al. p21Cip1/Waf1 disrupts the recruitment of human Fen1 by proliferating-cell nuclear antigen into the DNA replication complex. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[39] N. Stamford. Genetics and enzymology of the B12 pathway. , 1994, Ciba Foundation symposium.
[40] John Kuriyan,et al. Three-dimensional structure of the β subunit of E. coli DNA polymerase III holoenzyme: A sliding DNA clamp , 1992, Cell.
[41] K. Marians,et al. The Interaction between Helicase and Primase Sets the Replication Fork Clock* , 1996, The Journal of Biological Chemistry.
[42] R. Sousa,et al. Structural and mechanistic relationships between nucleic acid polymerases. , 1996, Trends in biochemical sciences.
[43] W. Messer,et al. DnaA initiator—also a transcription factor , 1997, Molecular microbiology.
[44] O. Aparicio,et al. Components and Dynamics of DNA Replication Complexes in S. cerevisiae: Redistribution of MCM Proteins and Cdc45p during S Phase , 1997, Cell.
[45] Judith L Campbell,et al. A yeast replicative helicase, Dna2 helicase, interacts with yeast FEN-1 nuclease in carrying out its essential function , 1997, Molecular and cellular biology.
[46] A. Kornberg,et al. The dnaB-dnaC replication protein complex of Escherichia coli. II. Role of the complex in mobilizing dnaB functions. , 1989, The Journal of biological chemistry.
[47] E. Egelman,et al. DNA is bound within the central hole to one or two of the six subunits of the T7 DNA helicase , 1996, Nature Structural Biology.
[48] Philip Cohen,et al. The molecular switch on , 2000 .
[49] T. Steitz,et al. A unified polymerase mechanism for nonhomologous DNA and RNA polymerases. , 1994, Science.
[50] L. Drury,et al. Cdc6p-dependent loading of Mcm proteins onto pre-replicative chromatin in budding yeast. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[51] A Rowkes. The Xenopus origin recognition complex. , 1998 .
[52] G. Evan,et al. Interaction between the Origin Recognition Complex and the Replication Licensing Systemin Xenopus , 1996, Cell.
[53] P. V. Shcherbakova,et al. 3' -> 5' Exonucleases of DNA Polymerases ε and δ Correct Base Analog Induced DNA Replication Errors on opposite DNA Strands in Saccharomyces Cerevisiae , 1996 .
[54] A. Sugino,et al. Yeast DNA polymerases and their role at the replication fork. , 1995, Trends in biochemical sciences.
[55] K. Bjornson,et al. Mechanisms of helicase-catalyzed DNA unwinding. , 1996, Annual review of biochemistry.
[56] E. Egelman. Homomorphous hexameric helicases: tales from the ring cycle. , 1996, Structure.
[57] B. Alberts,et al. The T4 DNA polymerase accessory proteins form an ATP-dependent complex on a primer-template junction. , 1991, The Journal of biological chemistry.
[58] K. Nasmyth,et al. Loading of an Mcm Protein onto DNA Replication Origins Is Regulated by Cdc6p and CDKs , 1997, Cell.
[59] C. Georgopoulos,et al. The T/t common exon of simian virus 40, JC, and BK polyomavirus T antigens can functionally replace the J-domain of the Escherichia coli DnaJ molecular chaperone. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[60] F. Dean,et al. Binding and unwinding—How T antigen engages the SV40 origin of DNA replication , 1990, Cell.
[61] Jun Yu Li,et al. Processing of branched DNA intermediates by a complex of human FEN-1 and PCNA. , 1996, Nucleic acids research.
[62] M. O’Donnell,et al. A Molecular Switch in a Replication Machine Defined by an Internal Competition for Protein Rings , 1996, Cell.
[63] T. Kelly,et al. Interaction of DNA polymerase alpha‐primase with cellular replication protein A and SV40 T antigen. , 1992, The EMBO journal.
[64] E. Zechner,et al. Coordinated leading- and lagging-strand synthesis at the Escherichia coli DNA replication fork. III. A polymerase-primase interaction governs primer size. , 1992, The Journal of biological chemistry.
[65] W. Zwerschke,et al. The Saccharomyces cerevisiae CDC6 gene is transcribed at late mitosis and encodes a ATP/GTPase controlling S phase initiation. , 1994, The Journal of biological chemistry.
[66] J. Turchi,et al. Enzymatic completion of mammalian lagging-strand DNA replication. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[67] K. Marians. Prokaryotic DNA replication. , 1992, Annual review of biochemistry.
[68] T. Steitz,et al. Crystal Structure of a pol α Family Replication DNA Polymerase from Bacteriophage RB69 , 1997, Cell.
[69] M. O’Donnell,et al. Assembly of a Chromosomal Replication Machine: Two DNA Polymerases, a Clamp Loader, and Sliding Clamps in One Holoenzyme Particle. , 1995, The Journal of Biological Chemistry.
[70] M. O’Donnell,et al. An explanation for lagging strand replication: Polymerase hopping among DNA sliding clamps , 1994, Cell.
[71] Z. Kelman,et al. DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine. , 1995, Annual review of biochemistry.
[72] S. Bell,et al. Architecture of the yeast origin recognition complex bound to origins of DNA replication , 1997, Molecular and cellular biology.
[73] Mei Chen,et al. Homology in accessory proteins of replicative polymerases--E. coli to humans , 1993, Nucleic Acids Res..
[74] D. Sengupta,et al. Strand and face: the topography of interactions between the SV40 origin of replication and T‐antigen during the initiation of replication. , 1994, The EMBO journal.
[75] B. Stillman,et al. Anatomy of a DNA replication fork revealed by reconstitution of SV40 DNA replication in vitro , 1994, Nature.
[76] M. Botchan,et al. The cellular DNA polymerase alpha-primase is required for papillomavirus DNA replication and associates with the viral E1 helicase. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[77] C. Alfano,et al. Heat shock protein-mediated disassembly of nucleoprotein structures is required for the initiation of bacteriophage lambda DNA replication. , 1989, The Journal of biological chemistry.
[78] C. McHenry,et al. Coupling of a Replicative Polymerase and Helicase: A τ–DnaB Interaction Mediates Rapid Replication Fork Movement , 1996, Cell.
[79] T. Coleman,et al. The Xenopus Cdc6 Protein Is Essential for the Initiation of a Single Round of DNA Replication in Cell-Free Extracts , 1996, Cell.
[80] C. M. Joyce,et al. Choosing the right sugar: how polymerases select a nucleotide substrate. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[81] Gabriel Waksman,et al. Major Domain Swiveling Revealed by the Crystal Structures of Complexes of E. coli Rep Helicase Bound to Single-Stranded DNA and ADP , 1997, Cell.
[82] James R. Kiefer,et al. Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal , 1998, Nature.
[83] T. Kusakabe,et al. The Role of the Zinc Motif in Sequence Recognition by DNA Primases* , 1996, The Journal of Biological Chemistry.
[84] B. Alberts. Prokaryotic DNA replication mechanisms. , 1987, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[85] A. Klein,et al. Initiation of ? DNA Replication in vitro , 1972 .
[86] T. Steitz,et al. Function and structure relationships in DNA polymerases. , 1994, Annual review of biochemistry.
[87] Andrej Sali,et al. Crystal Structure of the δ′ Subunit of the Clamp-Loader Complex of E. coli DNA Polymerase III , 1997, Cell.
[88] P. V. von Hippel,et al. The kinetic mechanism of formation of the bacteriophage T4 DNA polymerase sliding clamp. , 1996, Journal of molecular biology.
[89] I. M. Marks,et al. The amino-terminal transforming region of simian virus 40 large T and small t antigens functions as a J domain , 1997, Molecular and cellular biology.
[90] Bruce Stillman,et al. Smart machines at the DNA replication fork , 1994, Cell.
[91] T. Steitz,et al. Polymerase structures and function: variations on a theme? , 1995, Journal of bacteriology.
[92] T. Ceska,et al. A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease , 1996, Nature.