Crystal structure of the kinesin motor domain reveals a structural similarity to myosin

KINESIN is the founding member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation1,2. It has two identical ∼960-amino-acid chains containing an ammo-terminal globular motor domain, a central α-helical region that enables dimer formation through a coiled-coil, and a carboxy-terminal tail domain that binds light chains and possibly an organelle receptor1. The kinesin motor domain of ∼340 amino acids, which can produce movement in vitro3, is much smaller than that of myosin (∼850 amino acids) and dynein (1,000 amino acids), and is the smallest known molecular motor. Here, we report the crystal structure of the human kinesin motor domain with bound ADP determined to 1.8-Å resolution by X-ray crystallography. The motor consists primarily of a single α/β arrowhead-shaped domain with dimensions of 70×45×45 Å. Unexpectedly, it has a striking structural similarity to the core of the catalytic domain of the actin-based motor myosin. Although kinesin and myosin have virtually no amino-acid sequence identity, and exhibit distinct enzymatic4–6 and motile7–10 properties, our results suggest that these two classes of mechanochemical enzymes evolved from a common ancestor and share a similar force-generating strategy.

[1]  D. Hackney,et al.  Kinesin ATPase: rate-limiting ADP release. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[2]  E. Raff,et al.  Evidence that the head of kinesin is sufficient for force generation and motility in vitro. , 1990, Science.

[3]  F. Kull,et al.  The shapes of the motor domains of two oppositely directed microtubule motors, ncd and kinesin: a neutron scattering study. , 1995, Biophysical journal.

[4]  C. Sander,et al.  Protein structure comparison by alignment of distance matrices. , 1993, Journal of molecular biology.

[5]  L. Goldstein,et al.  With apologies to scheherazade: tails of 1001 kinesin motors. , 1993, Annual review of genetics.

[6]  B. Kerwin,et al.  Photochemical mapping of the active site of myosin. , 1992, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[7]  G. Bloom,et al.  Motor proteins. 1: kinesins. , 1994, Protein profile.

[8]  J. Gelles,et al.  Failure of a single-headed kinesin to track parallel to microtubule protofilaments , 1995, Nature.

[9]  E. Haber,et al.  The heart and cardiovascular system , 1986 .

[10]  James D. Jontes,et al.  A 32° tail swing in brush border myosin I on ADP release , 1995, Nature.

[11]  J. Schmitt,et al.  Regulation of rat hepatic lipase by the composition of monomolecular films of lipid. , 1993, Biochemistry.

[12]  J. A. Wells,et al.  Active site trapping of nucleotides by crosslinking two sulfhydryls in myosin subfragment 1. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[13]  R. Vale,et al.  Cloning and expression of a human kinesin heavy chain gene: interaction of the COOH-terminal domain with cytoplasmic microtubules in transfected CV-1 cells , 1992, The Journal of cell biology.

[14]  E. Taylor,et al.  Kinetic mechanism of kinesin motor domain. , 1995, Biochemistry.

[15]  Michael Whittaker,et al.  A 35-Å movement of smooth muscle myosin on ADP release , 1995, Nature.

[16]  Toshio Yanagida,et al.  Direct observation of single kinesin molecules moving along microtubules , 1996, Nature.

[17]  A. Hudspeth,et al.  Movement of microtubules by single kinesin molecules , 1989, Nature.

[18]  D. McRee Practical Protein Crystallography , 1993 .

[19]  P. Kraulis A program to produce both detailed and schematic plots of protein structures , 1991 .

[20]  Susan P. Gilbert,et al.  Pathway of processive ATP hydrolysis by kinesin , 1995, Nature.

[21]  Roger Cooke,et al.  Crystal structure of the motor domain of the kinesin-related motor ncd , 1996, Nature.

[22]  R A Milligan,et al.  Structure of the actin-myosin complex and its implications for muscle contraction. , 1993, Science.

[23]  T. Steitz,et al.  Structure of the recA protein–ADP complex , 1992, Nature.

[24]  L. Goldstein,et al.  Bead movement by single kinesin molecules studied with optical tweezers , 1990, Nature.

[25]  Clive R. Bagshaw,et al.  The characterization of myosin-product complexes and of product-release steps during the magnesium ion-dependent adenosine triphosphatase reaction. , 1974, The Biochemical journal.

[26]  Collaborative Computational,et al.  The CCP4 suite: programs for protein crystallography. , 1994, Acta crystallographica. Section D, Biological crystallography.

[27]  J. Thornton,et al.  PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .

[28]  R. Cooke,et al.  A novel adenosine triphosphate analog with a heavy atom to target the nucleotide binding site of proteins , 1995, Protein science : a publication of the Protein Society.

[29]  James A. Spudich,et al.  How molecular motors work , 1994, Nature.

[30]  H M Holden,et al.  X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4-. , 1995, Biochemistry.