Digital Gene Expression Analysis of Huanglongbing Affected Mandarins (Citrus reticulata Blanco) In Response to Thermotherapy

[1]  Zhao Ke,et al.  Expression Characteristics and Interacting Proteins of the Effector SDE70 from‘Candidatus Liberibacter asiatics’in Infected Citrus , 2020 .

[2]  M. Doud,et al.  Proteomics analysis reveals novel host molecular mechanisms associated with thermotherapy of ‘Ca. Liberibacter asiaticus’-infected citrus plants , 2016, BMC Plant Biology.

[3]  Pengfei Zhou,et al.  Cloning and Expression Analysis of Citrus Genes CsGH3.1 and CsGH3.6 Responding to Xanthomonas axonopodis pv. citri Infection , 2016 .

[4]  B. Jiang,et al.  Digital Gene Expression Analysis of Ponkan Mandarin (Citrus reticulata Blanco) in Response to Asia Citrus Psyllid-Vectored Huanglongbing Infection , 2016, International journal of molecular sciences.

[5]  J. Hartung,et al.  Transcriptome analysis of sweet orange trees infected with ‘Candidatus Liberibacter asiaticus’ and two strains of Citrus Tristeza Virus , 2016, BMC Genomics.

[6]  Siu-Ming Yiu,et al.  Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants. , 2016, The Plant journal : for cell and molecular biology.

[7]  Xiaoling Deng,et al.  Transcriptional Analyses of Mandarins Seriously Infected by ‘Candidatus Liberibacter asiaticus’ , 2015, PloS one.

[8]  Chun-zhen Cheng,et al.  Comparative Transcriptome and iTRAQ Proteome Analyses of Citrus Root Responses to Candidatus Liberibacter asiaticus Infection , 2015, PloS one.

[9]  Wei Hu,et al.  A banana aquaporin gene, MaPIP1;1, is involved in tolerance to drought and salt stresses , 2014, BMC Plant Biology.

[10]  Jun Liu,et al.  A deficiency in chloroplastic ferredoxin 2 facilitates effective photosynthetic capacity during long-term high light acclimation in Arabidopsis thaliana. , 2013, The Plant journal : for cell and molecular biology.

[11]  Weixiang Zhao,et al.  Gene Regulatory Networks Elucidating Huanglongbing Disease Mechanisms , 2013, PloS one.

[12]  G. Albrigo,et al.  Transcriptional and Microscopic Analyses of Citrus Stem and Root Responses to Candidatus Liberibacter asiaticus Infection , 2013, PloS one.

[13]  Y. Duan,et al.  Study on Citrus Response to Huanglongbing Highlights a Down-Regulation of Defense-Related Proteins in Lemon Plants Upon ‘Ca. Liberibacter asiaticus’ Infection , 2013, PloS one.

[14]  Daofeng Liu,et al.  Involvement of rose aquaporin RhPIP1;1 in ethylene-regulated petal expansion through interaction with RhPIP2;1 , 2013, Plant Molecular Biology.

[15]  E. Civerolo,et al.  The effect of ‘Candidatus Liberibacter asiaticus’ infection on the proteomic profiles and nutritional status of pre-symptomatic and symptomatic grapefruit (Citrus paradisi) plants , 2013, BMC Plant Biology.

[16]  Yanming Zhu,et al.  GsSRK, a G-type lectin S-receptor-like serine/threonine protein kinase, is a positive regulator of plant tolerance to salt stress. , 2013, Journal of plant physiology.

[17]  Zhi-Liang Zheng,et al.  Transcriptome comparison and gene coexpression network analysis provide a systems view of citrus response to ‘Candidatus Liberibacter asiaticus’ infection , 2013, BMC Genomics.

[18]  S. Lopes,et al.  Influence of temperature on infection and establishment of ‘Candidatus Liberibacter americanus’ and ‘Candidatus Liberibacter asiaticus’ in citrus plants , 2012 .

[19]  Kareem A. Mosa,et al.  Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants , 2012, Transgenic Research.

[20]  J. Forment,et al.  Transcriptomic profiling of citrus fruit peel tissues reveals fundamental effects of phenylpropanoids and ethylene on induced resistance. , 2011, Molecular plant pathology.

[21]  T. Demura,et al.  VASCULAR-RELATED NAC-DOMAIN7 directly regulates the expression of a broad range of genes for xylem vessel formation. , 2011, The Plant journal : for cell and molecular biology.

[22]  M. Hajirezaei,et al.  Cyanobacterial flavodoxin complements ferredoxin deficiency in knocked-down transgenic tobacco plants. , 2011, The Plant journal : for cell and molecular biology.

[23]  K. Dietz,et al.  Novel Regulators in Photosynthetic Redox Control of Plant Metabolism and Gene Expression1 , 2010, Plant Physiology.

[24]  Matthew D. Young,et al.  Gene ontology analysis for RNA-seq: accounting for selection bias , 2010, Genome Biology.

[25]  Nian Wang,et al.  Sequence of anatomical symptom observations in citrus affected with huanglongbing disease. , 2010 .

[26]  D. MacLean,et al.  A Putative Phosphatase, LSF1, Is Required for Normal Starch Turnover in Arabidopsis Leaves1[W][OA] , 2009, Plant Physiology.

[27]  L. Xiong,et al.  Genome-wide identification of BURP domain-containing genes in rice reveals a gene family with diverse structures and responses to abiotic stresses , 2009, Planta.

[28]  Lior Pachter,et al.  Sequence Analysis , 2020, Definitions.

[29]  M. Cambra,et al.  Liberibacters Associated with Citrus Huanglongbing in Brazil: 'Candidatus Liberibacter asiaticus' Is Heat Tolerant, 'Ca. L. americanus' Is Heat Sensitive. , 2009, Plant disease.

[30]  F. Song,et al.  A rice serine carboxypeptidase-like gene OsBISCPL1 is involved in regulation of defense responses against biotic and oxidative stress. , 2008, Gene.

[31]  B. Williams,et al.  Mapping and quantifying mammalian transcriptomes by RNA-Seq , 2008, Nature Methods.

[32]  W. Fang,et al.  Overexpression of zeaxanthin epoxidase gene enhances the sensitivity of tomato PSII photoinhibition to high light and chilling stress. , 2008, Physiologia plantarum.

[33]  Yoshihiro Yamanishi,et al.  KEGG for linking genomes to life and the environment , 2007, Nucleic Acids Res..

[34]  Yves Gibon,et al.  PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments , 2006, BMC Bioinformatics.

[35]  Wenbin Li,et al.  Quantitative real-time PCR for detection and identification of Candidatus Liberibacter species associated with citrus huanglongbing. , 2006, Journal of microbiological methods.

[36]  W. Kim,et al.  Overexpression of carnation S-adenosylmethionine decarboxylase gene generates a broad-spectrum tolerance to abiotic stresses in transgenic tobacco plants , 2006, Plant Cell Reports.

[37]  D. Cosgrove,et al.  © 2005 BioMed Central Ltd Summary , 2005 .

[38]  R. Tanaka,et al.  Effects of Chlorophyllide a Oxygenase Overexpression on Light Acclimation inArabidopsis thaliana , 2005, Photosynthesis Research.

[39]  E. T. Palva,et al.  Chlorophyllase 1, a Damage Control Enzyme, Affects the Balance between Defense Pathways in Plants , 2005, The Plant Cell Online.

[40]  S. Laubinger,et al.  The SPA Quartet: A Family of WD-Repeat Proteins with a Central Role in Suppression of Photomorphogenesis in Arabidopsis , 2004, The Plant Cell Online.

[41]  Frédérique Bitton,et al.  Genome-Wide Analysis of Arabidopsis Pentatricopeptide Repeat Proteins Reveals Their Essential Role in Organelle Biogenesis , 2004, The Plant Cell Online.

[42]  S. Yanagisawa.  Dof domain proteins: plant-specific transcription factors associated with diverse phenomena unique to plants. , 2004, Plant & cell physiology.

[43]  S. Rhee,et al.  MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. , 2004, The Plant journal : for cell and molecular biology.

[44]  A. von Schaewen,et al.  Decreased Content of Leaf Ferredoxin Changes Electron Distribution and Limits Photosynthesis in Transgenic Potato Plants1 , 2003, Plant Physiology.

[45]  A. Granell,et al.  A survey of genes differentially expressed during long-term heat-induced chilling tolerance in citrus fruit , 2003, Planta.

[46]  M. Petreikov,et al.  Suppression of fructokinase encoded by LeFRK2 in tomato stem inhibits growth and causes wilting of young leaves. , 2003, The Plant journal : for cell and molecular biology.

[47]  B. Winkel-Shirley,et al.  Biosynthesis of flavonoids and effects of stress. , 2002, Current opinion in plant biology.

[48]  Tsuyoshi Mizoguchi,et al.  LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis. , 2002, Developmental cell.

[49]  M. Stiborová,et al.  Flavonoids-potent and versatile biologically active compounds interacting with cytochromes P450. , 2002, Chemico-biological interactions.

[50]  Thomas D. Schmittgen,et al.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.

[51]  T. Boller,et al.  Both the Extracellular Leucine-Rich Repeat Domain and the Kinase Activity of FLS2 Are Required for Flagellin Binding and Signaling in Arabidopsis , 2001, Plant Cell.

[52]  S. Kay,et al.  Analysis of the function of two circadian-regulated CONSTANS-LIKE genes. , 2001, The Plant journal : for cell and molecular biology.

[53]  S. Smeekens,et al.  Plant fructokinases: a sweet family get-together. , 2000, Trends in plant science.

[54]  P. Vera,et al.  Local and systemic induction of two defense-related subtilisin-like protease promoters in transgenic Arabidopsis plants. Luciferin induction of PR gene expression. , 2000, Plant physiology.

[55]  M. Orbach,et al.  Meristem-Localized Inducible Expression of a UDP-Glycosyltransferase Gene Is Essential for Growth and Development in Pea and Alfalfa , 1999, Plant Cell.

[56]  Linda Chalker-Scott,et al.  Environmental Significance of Anthocyanins in Plant Stress Responses , 1999 .

[57]  C. Chapple,et al.  Antisense suppression of 4-coumarate:coenzyme A ligase activity in Arabidopsis leads to altered lignin subunit composition. , 1997, The Plant cell.

[58]  A. Keston,et al.  Mutarotase (aldose-1-epimerase) catalyzed anomerization of glucose-6-phosphate. , 1974, Archives of biochemistry and biophysics.

[59]  W. Dixon,et al.  Heat treatment eliminates 'Candidatus Liberibacter asiaticus' from infected citrus trees under controlled conditions. , 2013, Phytopathology.

[60]  Xuegong Zhang,et al.  DEGseq: an R package for identifying differentially expressed genes from RNA-seq data , 2010, Bioinform..

[61]  P. Chatelet,et al.  Ethylene and other stimuli affect expression of the UDP glucose-flavonoid 3-O-glucosyltransferase in a non-climacteric fruit , 2009 .

[62]  Kathleen Marchal,et al.  PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences , 2002, Nucleic Acids Res..

[63]  S. Clouse,et al.  Soybean BRU1 Encodes a Functional Xyloglucan Endotransglycosylase That is Highly Expressed in Inner Epicotyl Tissues during Brassinosteroid-Promoted Elongation , 1998 .

[64]  J. Bové,et al.  Influence of temperature on symptoms of California stubborn, South Africa greening, India citrus decline and Philippines leaf mottling diseases. , 1974 .