Dynamic protein interactions in the bacteriophage T4 replisome.

[1]  S. Benkovic,et al.  Building a Replisome Solution Structure by Elucidation of Protein-Protein Interactions in the Bacteriophage T4 DNA Polymerase Holoenzyme* 210 , 2001, The Journal of Biological Chemistry.

[2]  S. Benkovic,et al.  Creating a dynamic picture of the sliding clamp during T4 DNA polymerase holoenzyme assembly by using fluorescence resonance energy transfer , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[3]  S. Benkovic,et al.  Identification and Mapping of Protein-Protein Interactions between gp32 and gp59 by Cross-linking* , 2001, The Journal of Biological Chemistry.

[4]  P. V. von Hippel,et al.  Dissection of the ATP-driven reaction cycle of the bacteriophage T4 DNA replication processivity clamp loading system. , 2001, Journal of molecular biology.

[5]  Jennifer J. Kohler,et al.  Kinetic studies of Fos.Jun.DNA complex formation: DNA binding prior to dimerization. , 2001, Biochemistry.

[6]  S. Benkovic,et al.  Replisome-mediated DNA replication. , 2001, Annual review of biochemistry.

[7]  M. O’Donnell,et al.  Molecular Mechanism and Energetics of Clamp Assembly inEscherichia coli , 2000, The Journal of Biological Chemistry.

[8]  Zygmunt Gryczynski,et al.  A FRET-Based Sensor Reveals Large ATP Hydrolysis–Induced Conformational Changes and Three Distinct States of the Molecular Motor Myosin , 2000, Cell.

[9]  Paul R. Selvin,et al.  The renaissance of fluorescence resonance energy transfer , 2000, Nature Structural Biology.

[10]  T. Steitz,et al.  The complete atomic structure of the large ribosomal subunit at 2.4 A resolution. , 2000, Science.

[11]  S. Darst,et al.  A Structural Model of Transcription Elongation , 2000 .

[12]  S. Benkovic,et al.  Mapping protein - Protein interactions in the bacteriophage T4 DNA polymerase holoenzyme using a novel trifunctional photo-cross-linking and affinity reagent [11] , 2000 .

[13]  Malin M. Young,et al.  High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry , 2000, Proc. Natl. Acad. Sci. USA.

[14]  S. Benkovic,et al.  Tracking sliding clamp opening and closing during bacteriophage T4 DNA polymerase holoenzyme assembly. , 2000, Biochemistry.

[15]  J Kuriyan,et al.  Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage. , 2000, Journal of molecular biology.

[16]  K. Bennett,et al.  Probing protein surface topology by chemical surface labeling, crosslinking, and mass spectrometry. , 2000, Methods in molecular biology.

[17]  P. V. von Hippel,et al.  Opening of a monomer-monomer interface of the trimeric bacteriophage T4-coded GP45 sliding clamp is required for clamp loading onto DNA. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[18]  T. Steitz,et al.  Building a Replisome from Interacting Pieces Sliding Clamp Complexed to a Peptide from DNA Polymerase and a Polymerase Editing Complex , 1999, Cell.

[19]  A. D. Jones,et al.  The Carboxyl Terminus of the Bacteriophage T4 DNA Polymerase Contacts Its Sliding Clamp at the Subunit Interface* , 1999, The Journal of Biological Chemistry.

[20]  M. Wong,et al.  Simultaneous Interactions of Bacteriophage T4 DNA Replication Proteins gp59 and gp32 with Single-stranded (ss) DNA , 1999, The Journal of Biological Chemistry.

[21]  S. Benkovic,et al.  Sliding clamp of the bacteriophage T4 polymerase has open and closed subunit interfaces in solution. , 1999, Biochemistry.

[22]  O. H. Gumbs,et al.  Three mechanistic steps detected by FRET after presynaptic filament formation in homologous recombination. ATP hydrolysis required for release of oligonucleotide heteroduplex product from RecA. , 1998, Biochemistry.

[23]  S. Benkovic,et al.  Dissecting the order of bacteriophage T4 DNA polymerase holoenzyme assembly. , 1998, Biochemistry.

[24]  S. Balasubramanian,et al.  Use of fluorescence resonance energy transfer to investigate the conformation of DNA substrates bound to the Klenow fragment. , 1998, Biochemistry.

[25]  P. V. von Hippel,et al.  Structural Analyses of gp45 Sliding Clamp Interactions during Assembly of the Bacteriophage T4 DNA Polymerase Holoenzyme , 1997, The Journal of Biological Chemistry.

[26]  P. V. von Hippel,et al.  Structural Analyses of gp45 Sliding Clamp Interactions during Assembly of the Bacteriophage T4 DNA Polymerase Holoenzyme , 1997, The Journal of Biological Chemistry.

[27]  P. V. von Hippel,et al.  Structural Analyses of gp45 Sliding Clamp Interactions during Assembly of the Bacteriophage T4 DNA Polymerase Holoenzyme , 1997, The Journal of Biological Chemistry.

[28]  L. Lankiewicz,et al.  Fluorescence resonance energy transfer in studies of inter-chromophoric distances in biomolecules. , 1997, Acta biochimica Polonica.

[29]  P. V. von Hippel,et al.  Fluorescence monitoring of T4 polymerase holoenzyme accessory protein interactions during loading of the sliding clamp onto the template-primer junction. , 1996, Journal of molecular biology.

[30]  S. Benkovic,et al.  The carboxyl terminus of the bacteriophage T4 DNA polymerase is required for holoenzyme complex formation. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[31]  S. Benkovic,et al.  Role of adenosine 5'-triphosphate hydrolysis in the assembly of the bacteriophage T4 DNA replication holoenzyme complex. , 1996, Biochemistry.

[32]  S. Benkovic,et al.  Dual role of the 44/62 protein as a matchmaker protein and DNA polymerase chaperone during assembly of the bacteriophage T4 holoenzyme complex. , 1996, Biochemistry.

[33]  T. Steitz,et al.  Crystal structure of a replication fork single-stranded DNA binding protein (T4 gp32) complexed to DNA , 1995, Nature.

[34]  P. V. von Hippel,et al.  The Phage T4-coded DNA Replication Helicase (gp41) Forms a Hexamer upon Activation by Nucleoside Triphosphate (*) , 1995, The Journal of Biological Chemistry.

[35]  S. Benkovic,et al.  Accessory proteins function as matchmakers in the assembly of the T4 DNA polymerase holoenzyme , 1995, Current Biology.

[36]  S. Morrical,et al.  The gene 59 protein of bacteriophage T4 modulates the intrinsic and single-stranded DNA-stimulated ATPase activities of gene 41 protein, the T4 replicative DNA helicase. , 1994, The Journal of biological chemistry.

[37]  B. Alberts,et al.  Purification and characterization of bacteriophage T4 gene 59 protein. A DNA helicase assembly protein involved in DNA replication. , 1994, The Journal of biological chemistry.

[38]  L. Brand,et al.  Resonance energy transfer: methods and applications. , 1994, Analytical biochemistry.

[39]  J. Kuriyan,et al.  Sliding clamps of DNA polymerases. , 1993, Journal of molecular biology.

[40]  J. Brunner,et al.  New photolabeling and crosslinking methods. , 1993, Annual review of biochemistry.

[41]  S. Benkovic,et al.  Kinetic characterization of the polymerase and exonuclease activities of the gene 43 protein of bacteriophage T4. , 1992, Biochemistry.

[42]  N. Nossal,et al.  Protein‐protein interactions at a DNA replication fork: bacteriophage T4 as a model , 1992, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[43]  Shan S. Wong,et al.  Chemistry of Protein Conjugation and Cross Linking , 1991 .

[44]  B. Alberts,et al.  Effects of the bacteriophage T4 gene 41 and gene 32 proteins on RNA primer synthesis: coupling of leading- and lagging-strand DNA synthesis at a replication fork. , 1990, Biochemistry.

[45]  N. Nossal,et al.  Characterization of the bacteriophage T4 gene 41 DNA helicase. , 1989, The Journal of biological chemistry.

[46]  D. Hinton,et al.  Bacteriophage T4 DNA primase-helicase. Characterization of oligomer synthesis by T4 61 protein alone and in conjunction with T4 41 protein. , 1987, The Journal of biological chemistry.

[47]  B. J. Gaffney,et al.  Chemical and biochemical crosslinking of membrane components. , 1985, Biochimica et biophysica acta.

[48]  B. Alberts,et al.  Characterization of the stimulatory effect of T4 gene 45 protein and the gene 44/62 protein complex on DNA synthesis by T4 DNA polymerase. , 1984, Journal of molecular biology.

[49]  B. Alberts,et al.  Affinity purification of bacteriophage T4 proteins essential for DNA replication and genetic recombination. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[50]  M. Venkatesan,et al.  Bacteriophage T4 gene 41 protein, required for the synthesis of RNA primers, is also a DNA helicase. , 1982, The Journal of biological chemistry.

[51]  L. Stryer Fluorescence energy transfer as a spectroscopic ruler. , 1978, Annual review of biochemistry.

[52]  J. Hajdu,et al.  Crosslinking with bifunctional reagents as a means for studying the symmetry of oligomeric proteins. , 1976, European journal of biochemistry.

[53]  G R Stark,et al.  Use of dimethyl suberimidate, a cross-linking reagent, in studying the subunit structure of oligomeric proteins. , 1970, Proceedings of the National Academy of Sciences of the United States of America.

[54]  L. Stryer,et al.  Energy transfer: a spectroscopic ruler. , 1967, Proceedings of the National Academy of Sciences of the United States of America.

[55]  Th. Förster Zwischenmolekulare Energiewanderung und Fluoreszenz , 1948 .