Different effects of lipid chain length on the two sides of a membrane and the lipid annulus of MscL.

Quenching of the fluorescence of Trp residues in a membrane protein by lipids with bromine-containing fatty acyl chains provides a powerful technique for measuring lipid-protein binding constants. Single Trp residues have been placed on the periplasmic and cytoplasmic sides of the mechanosensitive channel of large conductance MscL from Mycobacterium tuberculosis to measure, separately, lipid binding constants on the two faces of MscL. The chain-length dependence of lipid binding was found to be different on the two sides of MscL, the chain-length dependence being more marked on the cytoplasmic than on the periplasmic side. To determine if lipid binding constants are affected by the properties of the lipid molecules not in direct contact with MscL (the bulk lipid), the amount of bulk lipid present in the system was varied. The binding constant of the short-chain phospholipid didodecylphosphatidylcholine was found to be independent of the molar ratio of lipid/MscL pentamer over the range 500:1-50:1, suggesting that lipid binding constants are determined largely by the properties of the lipid molecules interacting directly with MscL. These results point to a model in which lipid molecules located on the transmembrane surface of a membrane protein (the annular lipid molecules), by playing a dominant role in the interaction between a membrane protein and the surrounding lipid bilayer, could effectively buffer the membrane protein from changes in the properties of the bulk lipid bilayer.

[1]  T. McIntosh,et al.  Roles of bilayer material properties in function and distribution of membrane proteins. , 2006, Annual review of biophysics and biomolecular structure.

[2]  T. M. Raschke,et al.  Water structure and interactions with protein surfaces. , 2006, Current opinion in structural biology.

[3]  M. Wiener A Census of Ordered Lipids and Detergents in X‐ray Crystal Structures of Integral Membrane Proteins , 2006 .

[4]  L. Tamm Protein-lipid interactions : from membrane domains to cellular networks , 2006 .

[5]  P. Marius,et al.  The interfacial lipid binding site on the potassium channel KcsA is specific for anionic phospholipids. , 2005, Biophysical journal.

[6]  S. Harrison,et al.  Lipid–protein interactions in double-layered two-dimensional AQP0 crystals , 2005, Nature.

[7]  Anthony G. Lee How lipids and proteins interact in a membrane: a molecular approach. , 2005, Molecular bioSystems.

[8]  S. Opella,et al.  Tilt angle of a trans-membrane helix is determined by hydrophobic mismatch. , 2005, Journal of molecular biology.

[9]  Vikas Nanda,et al.  The conformation of the pore region of the M2 proton channel depends on lipid bilayer environment , 2005, Protein science : a publication of the Protein Society.

[10]  J. East,et al.  Identification of the hydrophobic thickness of a membrane protein using fluorescence spectroscopy: studies with the mechanosensitive channel MscL. , 2005, Biochemistry.

[11]  J. East,et al.  Heterogeneity in the binding of lipid molecules to the surface of a membrane protein: hot spots for anionic lipids on the mechanosensitive channel of large conductance MscL and effects on conformation. , 2005, Biochemistry.

[12]  Anthony G Lee,et al.  How lipids affect the activities of integral membrane proteins. , 2004, Biochimica et biophysica acta.

[13]  D. Marsh,et al.  The protein-lipid interface: perspectives from magnetic resonance and crystal structures. , 2004, Biochimica et biophysica acta.

[14]  Carola Hunte,et al.  Lipids in membrane protein structures. , 2004, Biochimica et biophysica acta.

[15]  Rob Phillips,et al.  Membrane-protein interactions in mechanosensitive channels. , 2004, Biophysical journal.

[16]  G. Otting,et al.  Dynamics of protein and peptide hydration. , 2004, Journal of the American Chemical Society.

[17]  J. East,et al.  Lipid-protein interactions studied by introduction of a tryptophan residue: the mechanosensitive channel MscL. , 2003, Biochemistry.

[18]  J. East,et al.  Interactions of anionic phospholipids and phosphatidylethanolamine with the potassium channel KcsA. , 2003, Biophysical journal.

[19]  Y. Sanejouand,et al.  Dynamical properties of the MscL of Escherichia coli: a normal mode analysis. , 2003, Journal of molecular biology.

[20]  Donald E Elmore,et al.  Investigating lipid composition effects on the mechanosensitive channel of large conductance (MscL) using molecular dynamics simulations. , 2003, Biophysical journal.

[21]  Tamar Schlick,et al.  Engineering teams up with computer-simulation and visualization tools to probe biomolecular mechanisms. , 2003, Biophysical journal.

[22]  A. Lee,et al.  Lipid-protein interactions in biological membranes: a structural perspective. , 2003, Biochimica et biophysica acta.

[23]  J. East,et al.  Interactions of phospholipids with the potassium channel KcsA. , 2002, Biophysical journal.

[24]  R. MacKinnon,et al.  Lipids in the structure, folding, and function of the KcsA K+ channel. , 2002, Biochemistry.

[25]  J. East,et al.  Selectivity in lipid binding to the bacterial outer membrane protein OmpF. , 2000, Biophysical journal.

[26]  H Luecke,et al.  Structure of bacteriorhodopsin at 1.55 A resolution. , 1999, Journal of molecular biology.

[27]  D C Rees,et al.  Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel. , 1998, Science.

[28]  Anthony G. Lee,et al.  How lipids interact with an intrinsic membrane protein: the case of the calcium pump. , 1998, Biochimica et biophysica acta.

[29]  M. Goulian,et al.  Energetics of inclusion-induced bilayer deformations. , 1998, Biophysical journal.

[30]  J. M. East,et al.  Hydrophobic Mismatch and the Incorporation of Peptides into Lipid Bilayers: A Possible Mechanism for Retention in the Golgi† , 1998 .

[31]  B. Roux,et al.  Structure, energetics, and dynamics of lipid–protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer , 1996, Proteins.

[32]  A. Ben-Shaul,et al.  A molecular model for lipid-protein interaction in membranes: the role of hydrophobic mismatch. , 1993, Biophysical journal.

[33]  P. W. Holloway,et al.  Quenching of tryptophan fluorescence by brominated phospholipid. , 1990, Biochemistry.

[34]  D Needham,et al.  Elastic deformation and failure of lipid bilayer membranes containing cholesterol. , 1990, Biophysical journal.

[35]  D. Melville,et al.  Exchange rates and numbers of annular lipids for the calcium and magnesium ion dependent adenosinetriphosphatase. , 1985, Biochemistry.

[36]  M. Bloom,et al.  Mattress model of lipid-protein interactions in membranes. , 1984, Biophysical journal.

[37]  A. Lee,et al.  Lipid selectivity of the calcium and magnesium ion dependent adenosinetriphosphatase, studied with fluorescence quenching by a brominated phospholipid. , 1982, Biochemistry.

[38]  J. Davoust,et al.  Simulation of electron spin resonance spectra of spin-labeled fatty acids covalently attached to the boundary of an intrinsic membrane protein. A chemical exchange model , 1982 .

[39]  J. Silvius,et al.  Lipid--protein multiple binding equilibria in membranes. , 1981, Biochemistry.

[40]  G. Feigenson,et al.  Fluorescence quenching in model membranes. 2. Determination of local lipid environment of the calcium adenosinetriphosphatase from sarcoplasmic reticulum. , 1981, Biochemistry.

[41]  R J Webb,et al.  Hydrophobic mismatch and the incorporation of peptides into lipid bilayers: a possible mechanism for retention in the Golgi. , 1998, Biochemistry.

[42]  G. Feigenson Fluorescence quenching in model membranes. , 1982, Biophysical journal.