A Horseshoe mixture model for Bayesian screening with an application to light sheet fluorescence microscopy in brain imaging
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Babak Shahbaba | Michele Guindani | Francesco Denti | Ricardo Azevedo | Chelsie Lo | Damian Wheeler | Sunil P. Gandhi
[1] E. George,et al. APPROACHES FOR BAYESIAN VARIABLE SELECTION , 1997 .
[2] James G. Scott,et al. Shrink Globally, Act Locally: Sparse Bayesian Regularization and Prediction , 2022 .
[3] Jeff W. Lichtman,et al. Clarifying Tissue Clearing , 2015, Cell.
[4] Gabriel M. Belfort,et al. Npas4 Regulates a Transcriptional Program in CA3 Required for Contextual Memory Formation , 2011, Science.
[5] M. Wand,et al. Mean field variational Bayes for continuous sparse signal shrinkage: Pitfalls and remedies , 2014 .
[6] Lancelot F. James,et al. Gibbs Sampling Methods for Stick-Breaking Priors , 2001 .
[7] Mathias Drton,et al. Robust Bayesian Graphical Modeling Using Dirichlet $t$-Distributions , 2014 .
[8] Mathias Drton,et al. Robust graphical modeling of gene networks using classical and alternative t-distributions , 2010, 1009.3669.
[9] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .
[10] Nicholas G. Polson,et al. The Horseshoe-Like Regularization for Feature Subset Selection , 2019, Sankhya B.
[11] G. Casella,et al. The Bayesian Lasso , 2008 .
[12] S. Gandhi,et al. Imaging the dynamic recruitment of monocytes to the blood–brain barrier and specific brain regions during Toxoplasma gondii infection , 2019, Proceedings of the National Academy of Sciences.
[13] Nicholas G. Polson,et al. Lasso Meets Horseshoe: A Survey , 2017, Statistical Science.
[14] J. Griffin,et al. Inference with normal-gamma prior distributions in regression problems , 2010 .
[15] Yingxi Lin,et al. Npas4: Linking Neuronal Activity to Memory , 2016, Trends in Neurosciences.
[16] Aad van der Vaart,et al. Uncertainty Quantification for the Horseshoe (with Discussion) , 2016, 1607.01892.
[17] Cheuk Y. Tang,et al. Mapping of Brain Activity by Automated Volume Analysis of Immediate Early Genes , 2016, Cell.
[18] E. George,et al. Journal of the American Statistical Association is currently published by American Statistical Association. , 2007 .
[19] B. Mallick,et al. Fast sampling with Gaussian scale-mixture priors in high-dimensional regression. , 2015, Biometrika.
[20] George Karabatsos,et al. Dirichlet process mixture models with shrinkage prior , 2021, Stat.
[21] Lydia Ng,et al. Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system , 2012, Nucleic Acids Res..
[22] Aki Vehtari,et al. Sparsity information and regularization in the horseshoe and other shrinkage priors , 2017, 1707.01694.
[23] B. Shahbaba,et al. Bayesian nonparametric variable selection as an exploratory tool for discovering differentially expressed genes , 2013, Statistics in medicine.
[24] James G. Scott,et al. The horseshoe estimator for sparse signals , 2010 .
[25] Demetris K. Roumis,et al. Functional Specialization of Mouse Higher Visual Cortical Areas , 2011, Neuron.
[26] Mark Hübener,et al. Mouse visual cortex , 2003, Current Opinion in Neurobiology.
[27] C. Carvalho,et al. Decoupling Shrinkage and Selection in Bayesian Linear Models: A Posterior Summary Perspective , 2014, 1408.0464.
[28] M. Stryker,et al. Modulation of Visual Responses by Behavioral State in Mouse Visual Cortex , 2010, Neuron.
[29] J. Sethuraman. A CONSTRUCTIVE DEFINITION OF DIRICHLET PRIORS , 1991 .
[30] Daniel F. Schmidt,et al. High-Dimensional Bayesian Regularised Regression with the BayesReg Package , 2016, 1611.06649.
[31] Gertraud Malsiner-Walli,et al. Model-based clustering based on sparse finite Gaussian mixtures , 2014, Statistics and Computing.
[32] T. J. Mitchell,et al. Bayesian Variable Selection in Linear Regression , 1988 .
[33] E. George,et al. The Spike-and-Slab LASSO , 2018 .
[34] M. Greenberg,et al. The regulation and function of c-fos and other immediate early genes in the nervous system , 1990, Neuron.
[35] Athar N. Malik,et al. Activity-dependent regulation of inhibitory synapse development by Npas4 , 2008, Nature.
[36] Nicholas G. Polson,et al. The Horseshoe+ Estimator of Ultra-Sparse Signals , 2015, 1502.00560.
[37] R. Tibshirani. Regression Shrinkage and Selection via the Lasso , 1996 .
[38] N. Pillai,et al. Dirichlet–Laplace Priors for Optimal Shrinkage , 2014, Journal of the American Statistical Association.
[39] Frühwirth-SchnatterSylvia,et al. Model-based clustering based on sparse finite Gaussian mixtures , 2016 .
[40] Yves Rosseel,et al. neuRosim: An R Package for Generating fMRI Data , 2011 .
[41] Qing Li,et al. The Bayesian elastic net , 2010 .
[42] David B. Dunson,et al. The Multiple Bayesian Elastic Net , 2010 .
[43] B. Efron. Size, power and false discovery rates , 2007, 0710.2245.
[44] Allon M. Klein,et al. Single-Cell Analysis of Experience-Dependent Transcriptomic States in Mouse Visual Cortex , 2017, Nature Neuroscience.
[45] Ka Yee Yeung,et al. Bayesian mixture model based clustering of replicated microarray data , 2004, Bioinform..
[46] H. Rue. Fast sampling of Gaussian Markov random fields , 2000 .
[47] J. S. Rao,et al. Spike and slab variable selection: Frequentist and Bayesian strategies , 2005, math/0505633.
[48] Anirban Bhattacharya,et al. Scalable Approximate MCMC Algorithms for the Horseshoe Prior , 2020, J. Mach. Learn. Res..
[49] David B Dunson,et al. Bayesian Semiparametric Multiple Shrinkage , 2010, Biometrics.
[50] James G. Scott,et al. The Bayesian bridge , 2011, 1109.2279.