Intestinal microbiota of gibel carp (Carassius auratus gibelio) and its origin as revealed by 454 pyrosequencing

[1]  S. Kaushik,et al.  Influence of the diet on the microbial diversity of faecal and gastrointestinal contents in gilthead sea bream (Sparus aurata) and intestinal contents in goldfish (Carassius auratus). , 2011, FEMS microbiology ecology.

[2]  E. Mittge,et al.  Evidence for a core gut microbiota in the zebrafish , 2011, The ISME Journal.

[3]  P. Shi,et al.  Analysis of bacterial diversity in the intestine of grass carp (Ctenopharyngodon idellus) based on 16S rDNA gene sequences , 2010 .

[4]  S. Nayak.  Role of gastrointestinal microbiota in fish , 2010 .

[5]  S. Wu,et al.  Microbial diversity of intestinal contents and mucus in yellow catfish (Pelteobagrus fulvidraco) , 2010 .

[6]  Anne Marie Bakke,et al.  Prebiotics in aquaculture: a review , 2010 .

[7]  V. Kunin,et al.  Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates. , 2009, Environmental microbiology.

[8]  C. Hui,et al.  Identification and drug sensitive test of the pathogen in Acinetobacter disease from hybrid crucian carp (Carassius auratus gibelio ♀ × Cyprinus carpio ♂). , 2010 .

[9]  Martin Hartmann,et al.  Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities , 2009, Applied and Environmental Microbiology.

[10]  J. Treasurer,et al.  Analysis of bacterial populations in the gut of developing cod larvae and identification of Vibrio logei, Vibrio anguillarum and Vibrio splendidus as pathogens of cod larvae , 2009 .

[11]  R. Knight,et al.  Worlds within worlds: evolution of the vertebrate gut microbiota , 2008, Nature Reviews Microbiology.

[12]  Chen Xiao-xuan.  Study on Digestive Enzyme-producing Bacteria from the Digestive Tract of Ctenopharyngodon idellus and Carassius auratus gibelio , 2008 .

[13]  R. Knight,et al.  Global patterns in bacterial diversity , 2007, Proceedings of the National Academy of Sciences.

[14]  B. Austin,et al.  Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss) , 2007, Journal of applied microbiology.

[15]  Å. Krogdahl,et al.  Characterisation of the microbiota associated with intestine of Atlantic cod (Gadus morhua L.): The effect of fish meal, standard soybean meal and a bioprocessed soybean meal , 2006 .

[16]  P. Navarrete,et al.  16S rDNA-Based Analysis of Dominant Bacterial Populations Associated with Early Life Stages of Coho Salmon (Oncorhynchus kisutch) , 2006, Microbial Ecology.

[17]  Marian M. Cahill.  Bacterial flora of fishes: A review , 2005, Microbial Ecology.

[18]  Zhongtang Yu,et al.  Improved extraction of PCR-quality community DNA from digesta and fecal samples. , 2004, BioTechniques.

[19]  J. Gordon,et al.  Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[20]  J. Gordon,et al.  Honor thy symbionts , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[21]  H. Sugita,et al.  Characterization of the goldfish fecal microflora by the fluorescent in situ hybridization method , 2003 .

[22]  Xiaobo Li,et al.  Study on the bacterial septicemia of Carassius Auratus of penze (♀)×Cyprinus Acutidorsalis (♀) I--isolation and identificatiion of the pathogen , 2003 .

[23]  D.G. Lee,et al.  Distribution of Aeromonas spp. as identified by 16S rDNA restriction fragment length polymorphism analysis in a trout farm , 2002, Journal of applied microbiology.

[24]  W. Verstraete,et al.  Probiotic Bacteria as Biological Control Agents in Aquaculture , 2000, Microbiology and Molecular Biology Reviews.

[25]  E. Ringø,et al.  INTESTINAL MICROFLORA OF FISH LARVAE AND FRY , 1999 .

[26]  H. Heuer,et al.  Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients , 1997, Applied and environmental microbiology.

[27]  K. Schleifer,et al.  Phylogenetic identification and in situ detection of individual microbial cells without cultivation. , 1995, Microbiological reviews.

[28]  E. Ringø,et al.  Microflora of Arctic charr, Salvelinus alpinus (L.): gastrointestinal microflora of free‐living fish and effect of diet and salinity on intestinal microflora , 1994 .

[29]  L. Overbeek,et al.  Bacterial Responses to Soil Stimuli , 1993 .

[30]  S. Kjelleberg.  Starvation in Bacteria , 1993, Springer US.

[31]  S. Goodison,et al.  16S ribosomal DNA amplification for phylogenetic study , 1991, Journal of bacteriology.

[32]  J. R. Macmillan,et al.  Seasonal Trends in Intestinal Bacterial Flora of Farm-Raised Channel Catfish , 1990 .

[33]  M. Cotta,et al.  Degradation of protein by mixed cultures of rumen bacteria: identification of Streptococcus bovis as an actively proteolytic rumen bacterium. , 1981, Journal of animal science.