Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis
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Yongchao Dou | Bin Yu | Yongchao Dou | Bin Yu | Shuxin Zhang | Chi Zhang | Guodong Ren | Meng Xie | Chi Zhang | Guodong Ren | Shuxin Zhang | Meng Xie
[1] Gunnar Rätsch,et al. Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana , 2008, Proceedings of the National Academy of Sciences.
[2] Xuemei Chen,et al. The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis , 2008, Proceedings of the National Academy of Sciences.
[3] D. Chevalier,et al. DAWDLE, a Forkhead-Associated Domain Gene, Regulates Multiple Aspects of Plant Development1[W] , 2006, Plant Physiology.
[4] M. Robinson,et al. A scaling normalization method for differential expression analysis of RNA-seq data , 2010, Genome Biology.
[5] J. Messing,et al. CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in microRNA Metabolism in Arabidopsis thaliana , 2002, Current Biology.
[6] Y. Ohba,et al. Location of a possible miRNA processing site in SmD3/SmB nuclear bodies in Arabidopsis. , 2007, Plant & cell physiology.
[7] Nicolas Bouché,et al. An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs , 2006, The EMBO journal.
[8] Edwards Allen,et al. DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[9] D. Bartel,et al. A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. , 2006, Genes & development.
[10] J. Mateos,et al. A loop‐to‐base processing mechanism underlies the biogenesis of plant microRNAs miR319 and miR159 , 2009, The EMBO journal.
[11] Yuda Fang,et al. Identification of Nuclear Dicing Bodies Containing Proteins for MicroRNA Biogenesis in Living Arabidopsis Plants , 2007, Current Biology.
[12] C. Pikaard,et al. Noncoding Transcription by RNA Polymerase Pol IVb/Pol V Mediates Transcriptional Silencing of Overlapping and Adjacent Genes , 2008, Cell.
[13] N. Fedoroff,et al. A Mutation in the Arabidopsis HYL1 Gene Encoding a dsRNA Binding Protein Affects Responses to Abscisic Acid, Auxin, and Cytokinin , 2000, Plant Cell.
[14] B. Meyers,et al. Bioinformatics analysis of small RNAs in plants using next generation sequencing technologies. , 2010, Methods in molecular biology.
[15] C. Schwechheimer,et al. The Evolutionarily Conserved TOUGH Protein Is Required for Proper Development of Arabidopsis thalianaw⃞ , 2005, The Plant Cell Online.
[16] Xuemei Chen,et al. HEN1 functions pleiotropically in Arabidopsis development and acts in C function in the flower. , 2002, Development.
[17] Y. Dong,et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi , 2003, Nature.
[18] M. Van Montagu,et al. The SERRATE locus controls the formation of the early juvenile leaves and phase length in Arabidopsis. , 1999, The Plant journal : for cell and molecular biology.
[19] R. Poethig,et al. A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis. , 2005, Genes & development.
[20] N. Fedoroff,et al. The Helicase and RNaseIIIa Domains of Arabidopsis Dicer-Like1 Modulate Catalytic Parameters during MicroRNA Biogenesis1[C][W][OA] , 2012, Plant Physiology.
[21] Franck Vazquez,et al. Arabidopsis endogenous small RNAs: highways and byways. , 2006, Trends in plant science.
[22] Adam M. Gustafson,et al. microRNA-Directed Phasing during Trans-Acting siRNA Biogenesis in Plants , 2005, Cell.
[23] L. Regan,et al. Antiparallel Leucine Zipper-Directed Protein Reassembly: Application to the Green Fluorescent Protein , 2000 .
[24] Bin Yu,et al. A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation , 2012, Nucleic acids research.
[25] Xuemei Chen,et al. microRNA biogenesis and function in plants , 2005, FEBS letters.
[26] Yijun Qi,et al. Biochemical specialization within Arabidopsis RNA silencing pathways. , 2005, Molecular cell.
[27] N. Chua,et al. Structure of Arabidopsis HYPONASTIC LEAVES1 and its molecular implications for miRNA processing. , 2010, Structure.
[28] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[29] S. Jacobsen,et al. Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems. , 1999, Development.
[30] N. Fedoroff,et al. Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body , 2007, Proceedings of the National Academy of Sciences.
[31] W. Filipowicz,et al. The widespread regulation of microRNA biogenesis, function and decay , 2010, Nature Reviews Genetics.
[32] D. Bartel. MicroRNAs Genomics, Biogenesis, Mechanism, and Function , 2004, Cell.
[33] M. Stam,et al. Plant Methods BioMed Central Methodology Chromatin immunoprecipitation: optimization, quantitative , 2007 .
[34] V. Reinke,et al. Genome-wide analysis of germ cell proliferation in C.elegans identifies VRK-1 as a key regulator of CEP-1/p53. , 2010, Developmental biology.
[35] R. Lister,et al. A link between RNA metabolism and silencing affecting Arabidopsis development. , 2008, Developmental cell.
[36] S. Gelvin,et al. Vectors for multi-color bimolecular fluorescence complementation to investigate protein-protein interactions in living plant cells , 2008, Plant Methods.
[37] Mark D. Robinson,et al. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..
[38] I. Henderson,et al. Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning , 2006, Nature Genetics.
[39] J. Schroeder,et al. An mRNA Cap Binding Protein, ABH1, Modulates Early Abscisic Acid Signal Transduction in Arabidopsis , 2001, Cell.
[40] M. Schmid,et al. Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana , 2003, Science.
[41] R. Roy,et al. Suppressors of the cdc-25.1(gf)-associated intestinal hyperplasia reveal important maternal roles for prp-8 and a subset of splicing factors in C. elegans. , 2008, RNA.
[42] M. Crespi,et al. Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses. , 2008, Genome research.
[43] C. Pikaard,et al. Gateway-compatible vectors for plant functional genomics and proteomics. , 2006, The Plant journal : for cell and molecular biology.
[44] Xinfu Jiao,et al. Identification of Target Messenger RNA Substrates for the Murine Deleted in Azoospermia-Like RNA-Binding Protein1 , 2002, Biology of reproduction.