Cytosine modifications exhibit circadian oscillations that are involved in epigenetic diversity and aging
暂无分享,去创建一个
A. Petronis | V. Labrie | Karolis Koncevicius | Peixin Jia | Matthew Carlucci | M. Ralph | Gabriel Oh | Akhil Nair | Sasha Ebrahimi | Tenjin C. Shrestha | Daniel Groot | M. Susic | E. Oh | Aiping Zhang | J. Gordevičius | R. Jeremian | Akhil P Nair | Richie Jeremian
[1] M. Lazar,et al. Circadian time signatures of fitness and disease , 2016, Science.
[2] M. Levine,et al. DNA methylation-based measures of biological age: meta-analysis predicting time to death , 2016, Aging.
[3] M. Levine,et al. An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease , 2016, Genome Biology.
[4] S. Horvath,et al. Huntington's disease accelerates epigenetic aging of human brain and disrupts DNA methylation levels , 2016, Aging.
[5] I. Gottesman,et al. Epigenetic assimilation in the aging human brain , 2016, Genome Biology.
[6] Shihong Ma,et al. Daily Variation in Global and Local DNA Methylation in Mouse Livers , 2015, PloS one.
[7] Ting Wang,et al. Intermediate DNA methylation is a conserved signature of genome regulation , 2015, Nature Communications.
[8] Aviv Regev,et al. Changes in nucleosome occupancy associated with metabolic alterations in aged mammalian liver. , 2014, Cell reports.
[9] J. Schneider,et al. 24-Hour Rhythms of DNA Methylation and Their Relation with Rhythms of RNA Expression in the Human Dorsolateral Prefrontal Cortex , 2014, PLoS genetics.
[10] M. Hughes,et al. A circadian gene expression atlas in mammals: Implications for biology and medicine , 2014, Proceedings of the National Academy of Sciences.
[11] Benjamin A. Raby,et al. CIRCADIAN RHYTHM REPROGRAMMING DURING LUNG INFLAMMATION , 2014, Nature Communications.
[12] Björn Usadel,et al. Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..
[13] Steven A. Brown,et al. Circadian behavior is light-reprogrammed by plastic DNA methylation , 2014, Nature Neuroscience.
[14] Pierre Baldi,et al. Reprogramming of the Circadian Clock by Nutritional Challenge , 2013, Cell.
[15] Peter D. Adams,et al. Senescent cells harbour features of the cancer epigenome , 2013, Nature Cell Biology.
[16] S. Horvath. DNA methylation age of human tissues and cell types , 2013, Genome Biology.
[17] Andrew E. Teschendorff,et al. Age-associated epigenetic drift: implications, and a case of epigenetic thrift? , 2013, Human molecular genetics.
[18] Manuel Serrano,et al. The Hallmarks of Aging , 2013, Cell.
[19] C. Scheiermann,et al. Circadian control of the immune system , 2013, Nature Reviews Immunology.
[20] Satchidananda Panda,et al. Circadian oscillations of protein-coding and regulatory RNAs in a highly dynamic mammalian liver epigenome. , 2012, Cell metabolism.
[21] Angel D. Pizarro,et al. CircaDB: a database of mammalian circadian gene expression profiles , 2012, Nucleic Acids Res..
[22] J. Takahashi,et al. Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals , 2012, Science.
[23] R. Kondratov,et al. The circadian clock and pathology of the ageing brain , 2012, Nature Reviews Neuroscience.
[24] Steven L Salzberg,et al. Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.
[25] R. Shoemaker,et al. Library-free Methylation Sequencing with Bisulfite Padlock Probes , 2012, Nature Methods.
[26] Oren Froy,et al. Circadian rhythms, aging, and life span in mammals. , 2011, Physiology.
[27] Matko Bosnjak,et al. REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms , 2011, PloS one.
[28] C. Weitz,et al. A Molecular Mechanism for Circadian Clock Negative Feedback , 2011, Science.
[29] Felix Krueger,et al. Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications , 2011, Bioinform..
[30] Paolo Sassone-Corsi,et al. The histone methyltransferase MLL1 permits the oscillation of circadian gene expression , 2010, Nature Structural &Molecular Biology.
[31] Cory Y. McLean,et al. GREAT improves functional interpretation of cis-regulatory regions , 2010, Nature Biotechnology.
[32] Mikael Bodén,et al. MEME Suite: tools for motif discovery and searching , 2009, Nucleic Acids Res..
[33] Erin L. McDearmon,et al. The genetics of mammalian circadian order and disorder: implications for physiology and disease , 2008, Nature Reviews Genetics.
[34] W. Mitzner,et al. Global expression profiles from C57BL/6J and DBA/2J mouse lungs to determine aging-related genes. , 2007, Physiological genomics.
[35] Ueli Schibler,et al. Rhythmic CLOCK-BMAL1 binding to multiple E-box motifs drives circadian Dbp transcription and chromatin transitions , 2006, Nature Genetics.
[36] P. Hardin,et al. Circadian rhythms from multiple oscillators: lessons from diverse organisms , 2005, Nature Reviews Genetics.
[37] S. Batalov,et al. A gene atlas of the mouse and human protein-encoding transcriptomes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[38] Andrea Cocito,et al. Genomic targets of the human c-Myc protein. , 2003, Genes & development.
[39] S. Reppert,et al. Coordination of circadian timing in mammals , 2002, Nature.
[40] L. Desbarats,et al. Discrimination between different E-box-binding proteins at an endogenous target gene of c-myc. , 1996, Genes & development.
[41] A. B. Hill. The Environment and Disease: Association or Causation? , 1965, Proceedings of the Royal Society of Medicine.
[42] M. Tahiliani,et al. MLL Partner TET1 5-Hydroxymethylcytosine in Mammalian DNA by Conversion of 5-Methylcytosine to , 2009 .
[43] P. Pelicci,et al. "Myc represses transcription through recruitment of DNA methyltransferase corepressor" , 2005 .