Harnessing the Power of Many: Extensible Toolkit for Scalable Ensemble Applications
暂无分享,去创建一个
Matteo Turilli | Jeroen Tromp | Guido Cervone | Vivek Balasubramanian | Weiming Hu | Matthieu Lefebvre | Shantenu Jha | Wenjie Lei | J. Tromp | S. Jha | G. Cervone | M. Turilli | M. Lefebvre | W. Lei | Vivek Balasubramanian | Weiming Hu
[1] Hui Wan,et al. Short ensembles: an efficient method for discerning climate-relevant sensitivities in atmospheric general circulation models , 2014 .
[2] Michael Stonebraker,et al. Too much middleware , 2002, SGMD.
[3] G. Sherlock,et al. Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads , 2010, BMC Genomics.
[4] Massimo Cafaro,et al. Secure Web Services with Globus GSI and gSOAP , 2003, Euro-Par.
[5] Edward B. Duffy,et al. JUMMP: Job Uninterrupted Maneuverable MapReduce Platform , 2013, 2013 IEEE International Conference on Cluster Computing (CLUSTER).
[6] L. D. Monache,et al. An analog ensemble for short-term probabilistic solar power forecast , 2015 .
[7] C. Schütte,et al. Supplementary Information for “ Constructing the Equilibrium Ensemble of Folding Pathways from Short Off-Equilibrium Simulations ” , 2009 .
[8] Guido Cervone,et al. Risk assessment of atmospheric emissions using machine learning , 2008 .
[9] Devarshi Ghoshal,et al. Tigres Workflow Library: Supporting Scientific Pipelines on HPC Systems , 2016, 2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid).
[10] Jean Virieux,et al. An overview of full-waveform inversion in exploration geophysics , 2009 .
[11] Peter J. Tonellato,et al. COSMOS: Python library for massively parallel workflows , 2014, Bioinform..
[12] Y. Sugita,et al. Replica-exchange molecular dynamics method for protein folding , 1999 .
[13] S. Krishnan. myHadoop-Hadoop-on-Demand on Traditional HPC Resources , 2004 .
[14] Peter Bauer,et al. The quiet revolution of numerical weather prediction , 2015, Nature.
[15] Daniel S. Katz,et al. Pegasus: A framework for mapping complex scientific workflows onto distributed systems , 2005, Sci. Program..
[16] Shantenu Jha,et al. Ensemble Toolkit: Scalable and Flexible Execution of Ensembles of Tasks , 2016, 2016 45th International Conference on Parallel Processing (ICPP).
[17] Ian J. Taylor,et al. The Triana Workflow Environment: Architecture and Applications , 2007, Workflows for e-Science, Scientific Workflows for Grids.
[18] Frank Noé,et al. Markov state models of biomolecular conformational dynamics. , 2014, Current opinion in structural biology.
[19] Jun'ichi Tsujii,et al. Design and Implementation of GXP Make - A Workflow System Based on Make , 2010, eScience.
[20] David Pugmire,et al. Global adjoint tomography: first-generation model , 2016 .
[21] Edward A. Lee,et al. Scientific workflow management and the Kepler system , 2006, Concurr. Comput. Pract. Exp..
[22] Mitsuhisa Sato,et al. OmniRPC: a grid RPC system for parallel programming in cluster and grid environment , 2003, CCGrid 2003. 3rd IEEE/ACM International Symposium on Cluster Computing and the Grid, 2003. Proceedings..
[23] Matthew R. Pocock,et al. Taverna: a tool for the composition and enactment of bioinformatics workflows , 2004, Bioinform..
[24] Shawn Hoon,et al. Biopipe: a flexible framework for protocol-based bioinformatics analysis. , 2003, Genome research.
[25] A. Nekrutenko,et al. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences , 2010, Genome Biology.
[26] Daniel R. Roe,et al. The Impact of Heterogeneous Computing on Workflows for Biomolecular Simulation and Analysis , 2015, Computing in Science & Engineering.
[27] Grant M. Rotskoff,et al. Molecular simulation workflows as parallel algorithms: the execution engine of Copernicus, a distributed high-performance computing platform. , 2015, Journal of chemical theory and computation.
[28] Daniel S. Katz,et al. Swift: A language for distributed parallel scripting , 2011, Parallel Comput..
[29] Berk Hess,et al. GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers , 2015 .
[30] Leo Goodstadt,et al. Ruffus: a lightweight Python library for computational pipelines , 2010, Bioinform..
[31] D. Komatitsch,et al. Spectral-element simulations of global seismic wave propagation—I. Validation , 2002 .
[32] Shantenu Jha,et al. Hadoop on HPC: Integrating Hadoop and Pilot-Based Dynamic Resource Management , 2016, 2016 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW).
[33] Shantenu Jha,et al. Design and Performance Characterization of RADICAL-Pilot on Titan , 2018, ArXiv.
[34] N. K. Bose,et al. High resolution image formation from low resolution frames using Delaunay triangulation , 2002, IEEE Trans. Image Process..
[35] Jun'ichi Tsujii,et al. Design and Implementation of GXP Make -- A Workflow System Based on Make , 2010, 2010 IEEE Sixth International Conference on e-Science.
[36] Satoshi Matsuoka,et al. Ninf-G: A Reference Implementation of RPC-based Programming Middleware for Grid Computing , 2003, Journal of Grid Computing.
[37] Luca Delle Monache,et al. Short-term photovoltaic power forecasting using Artificial Neural Networks and an Analog Ensemble , 2017 .