Histogram-based adaptive gray level scaling for texture feature classification of colorectal polyps

Texture features have played an ever increasing role in computer aided detection (CADe) and diagnosis (CADx) methods since their inception. Texture features are often used as a method of false positive reduction for CADe packages, especially for detecting colorectal polyps and distinguishing them from falsely tagged residual stool and healthy colon wall folds. While texture features have shown great success there, the performance of texture features for CADx have lagged behind primarily because of the more similar features among different polyps types. In this paper, we present an adaptive gray level scaling and compare it to the conventional equal-spacing of gray level bins. We use a dataset taken from computed tomography colonography patients, with 392 polyp regions of interest (ROIs) identified and have a confirmed diagnosis through pathology. Using the histogram information from the entire ROI dataset, we generate the gray level bins such that each bin contains roughly the same number of voxels Each image ROI is the scaled down to two different numbers of gray levels, using both an equal spacing of Hounsfield units for each bin, and our adaptive method. We compute a set of texture features from the scaled images including 30 gray level co-occurrence matrix (GLCM) features and 11 gray level run length matrix (GLRLM) features. Using a random forest classifier to distinguish between hyperplastic polyps and all others (adenomas and adenocarcinomas), we find that the adaptive gray level scaling can improve performance based on the area under the receiver operating characteristic curve by up to 4.6%.

[1]  Hiroyuki Yoshida,et al.  Context-specific method for detection of soft-tissue lesions in non-cathartic low-dose dual-energy CT colonography , 2015, Medical Imaging.

[2]  P. Pickhardt,et al.  CT colonography (virtual colonoscopy) for primary colorectal screening: challenges facing clinical implementation , 2004, Abdominal Imaging.

[3]  Jacob D. Furst,et al.  RUN-LENGTH ENCODING FOR VOLUMETRIC TEXTURE , 2004 .

[4]  Juan J. Martinez,et al.  Evaluation of tumor-derived MRI-texture features for discrimination of molecular subtypes and prediction of 12-month survival status in glioblastoma. , 2015, Medical physics.

[5]  Keigo Kono,et al.  Quantitative distinction of the morphological characteristic of erythrocyte precursor cells with texture analysis using gray level co‐occurrence matrix , 2018, Journal of clinical laboratory analysis.

[6]  Ling Fu,et al.  Characterization of collagen fibers by means of texture analysis of second harmonic generation images using orientation-dependent gray level co-occurrence matrix method. , 2012, Journal of biomedical optics.

[7]  Perry J Pickhardt,et al.  Differential diagnosis of polypoid lesions seen at CT colonography (virtual colonoscopy). , 2004, Radiographics : a review publication of the Radiological Society of North America, Inc.

[8]  Tahsin Kurc,et al.  Malignant‐lesion segmentation using 4D co‐occurrence texture analysis applied to dynamic contrast‐enhanced magnetic resonance breast image data , 2007, Journal of magnetic resonance imaging : JMRI.

[9]  Robert M. Haralick,et al.  Textural Features for Image Classification , 1973, IEEE Trans. Syst. Man Cybern..

[10]  Hiroyuki Yoshida,et al.  CAD in CT colonography without and with oral contrast agents: Progress and challenges , 2007, Comput. Medical Imaging Graph..

[11]  Zhengrong Liang,et al.  Texture Feature Extraction and Analysis for Polyp Differentiation via Computed Tomography Colonography , 2016, IEEE Transactions on Medical Imaging.

[12]  Marcial García-Rojo,et al.  Influence of Texture and Colour in Breast TMA Classification , 2015, PloS one.

[13]  O. Basset,et al.  Texture Analysis of Ultrasonic Images of the Prostate by Means of Co-Occurrence Matrices , 1993 .