Crystal structure of human beta-hexosaminidase B: understanding the molecular basis of Sandhoff and Tay-Sachs disease.
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M. James | B. Mark | S. Knapp | Dalian Zhao | D. Mahuran | Maia M Cherney | Michael N G James | Don J Mahuran | Dalian Zhao | Brian L Mark | Spencer Knapp | M. Cherney
[1] E. Katchalski‐Katzir,et al. Molecular surface recognition: determination of geometric fit between proteins and their ligands by correlation techniques. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[2] K. Sandhoff,et al. Specificity of human liver hexosaminidases A and B against glycosphingolipids GM2 and GA2. Purification of the enzymes by affinity chromatography employing specific elution. , 1977, Hoppe-Seyler's Zeitschrift fur physiologische Chemie.
[3] K. Ohno,et al. GM2-gangliosidosis B1 variant: A wide geographic and ethnic distribution of the specific β-hexosaminidase α chain mutation originally identified in a puerto rican patient* , 1988 .
[4] D. Mahuran,et al. Biochemical characterization of the Cys138Arg substitution associated with the AB variant form of GM2 gangliosidosis: evidence that Cys138 is required for the recognition of the GM2 activator/GM2 ganglioside complex by beta-hexosaminidase A. , 1998, Biochemistry.
[5] M. James,et al. Crystallization of human β-hexosaminidase B , 1992 .
[6] Stephen G. Withers,et al. Biochemical and Structural Assessment of the 1-N-Azasugar GalNAc-isofagomine as a Potent Family 20 β-N-Acetylhexosaminidase Inhibitor* , 2001, The Journal of Biological Chemistry.
[7] K. Sandhoff,et al. Sphingolipid Activator Proteins , 2002 .
[8] J. Rouvinen,et al. Several cooperating binding sites mediate the interaction of a lysosomal enzyme with phosphotransferase , 1997, The EMBO journal.
[9] K. Sandhoff,et al. Complexing of glycolipids and their transfer between membranes by the activator protein for degradation of lysosomal ganglioside GM2. , 1982, European journal of biochemistry.
[10] N. Guex,et al. SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modeling , 1997, Electrophoresis.
[11] B. Henrissat,et al. Serratia marcescens chitobiase is a retaining glycosidase utilizing substrate acetamido group participation. , 1997, The Biochemical journal.
[12] I. Mellman,et al. The mannose 6-phosphate receptor and the biogenesis of lysosomes , 1988, Cell.
[13] E A Merritt,et al. Raster3D: photorealistic molecular graphics. , 1997, Methods in enzymology.
[14] D. Mahuran,et al. Introduction of the alpha subunit mutation associated with the B1 variant of Tay-Sachs disease into the beta subunit produces a beta-hexosaminidase B without catalytic activity. , 1989, The Journal of biological chemistry.
[15] R. Proia,et al. Evidence for the Involvement of Glu-355 in the Catalytic Action of Human β-Hexosaminidase B* , 1997, The Journal of Biological Chemistry.
[16] R. Proia,et al. Proteolytic processing of the beta-subunit of the lysosomal enzyme, beta-hexosaminidase, in normal human fibroblasts. , 1989, The Journal of biological chemistry.
[17] D. Mahuran,et al. The GM2 activator protein, its roles as a co-factor in GM2 hydrolysis and as a general glycolipid transport protein. , 1998, Biochimica et biophysica acta.
[18] D. Mahuran,et al. Direct determination of the substrate specificity of the alpha-active site in heterodimeric beta-hexosaminidase A. , 1996, Biochemistry.
[19] A Bairoch,et al. Updating the sequence-based classification of glycosyl hydrolases. , 1996, The Biochemical journal.
[20] Thomas C. Terwilliger,et al. Automated MAD and MIR structure solution , 1999, Acta crystallographica. Section D, Biological crystallography.
[21] G. Schwarzmann,et al. The human GM2 activator protein. A substrate specific cofactor of beta-hexosaminidase A. , 1991, The Journal of biological chemistry.
[22] G. Vavougios,et al. Proteolytic processing of the proβ chain of β-hexosaminidase occurs at basic residues contained within an exposed disulfide loop structure , 1993 .
[23] D. Mahuran,et al. A Pro504 → Ser Substitution in the β-Subunit of β-Hexosaminidase A Inhibits α-Subunit Hydrolysis of GM2Ganglioside, Resulting in Chronic Sandhoff Disease* , 1998, The Journal of Biological Chemistry.
[24] R. Proia,et al. Kidney Sulfatides in Mouse Models of Inherited Glycosphingolipid Disorders , 2002, The Journal of Biological Chemistry.
[25] W. Delano. The PyMOL Molecular Graphics System , 2002 .
[26] A. Brünger,et al. Torsion angle dynamics: Reduced variable conformational sampling enhances crystallographic structure refinement , 1994, Proteins.
[27] S. Kornfeld,et al. Assembly of asparagine-linked oligosaccharides. , 1985, Annual review of biochemistry.
[28] E. Petroulakis,et al. Benign HEXA Mutations, C739T(R247W) and C745T(R249W), Cause β-Hexosaminidase A Pseudodeficiency by Reducing the α-Subunit Protein Levels* , 1997, The Journal of Biological Chemistry.
[29] A. Brunger. Free R value: a novel statistical quantity for assessing the accuracy of crystal structures. , 1992 .
[30] B. Henrissat,et al. Identification of Candidate Active Site Residues in Lysosomal β-Hexosaminidase A* , 1997, The Journal of Biological Chemistry.
[31] K. Ohno,et al. A Point Mutation in the Coding Sequence of the β‐Hexosaminidase α Gene Results in Defective Processing of the Enzyme Protein in an Unusual GM2‐Gangliosidosis Variant , 1988 .
[32] G. Bach,et al. I-cell disease: deficiency of extracellular hydrolase phosphorylation. , 1979, Biochemical and biophysical research communications.
[33] J. Callahan,et al. The amino‐terminal sequences in the pro‐α and ‐β polypeptides of human lysosomal β‐hexosaminidase A and B are retained in the mature isozymes , 1989 .
[34] A. Cantor,et al. Lysosomal enzyme phosphorylation. I. Protein recognition determinants in both lobes of procathepsin D mediate its interaction with UDP-GlcNAc:lysosomal enzyme N-acetylglucosamine-1-phosphotransferase. , 1992, The Journal of biological chemistry.
[35] K. Sandhoff,et al. Evidence for two different active sites on human beta-hexosaminidase A. Interaction of GM2 activator protein with beta-hexosaminidase A. , 1985, The Journal of biological chemistry.
[36] D. Mahuran,et al. Identification of the 6-Sulfate Binding Site Unique to α-Subunit-Containing Isozymes of Human β-Hexosaminidase , 2001 .
[37] R. Proia,et al. Physiological Substrates for Human Lysosomal β-Hexosaminidase S* , 2002, The Journal of Biological Chemistry.
[38] R. Proia,et al. Identification of Domains in Human β-Hexosaminidase That Determine Substrate Specificity* , 1996, The Journal of Biological Chemistry.
[39] J. Zou,et al. Improved methods for building protein models in electron density maps and the location of errors in these models. , 1991, Acta crystallographica. Section A, Foundations of crystallography.
[40] Zbigniew Dauter,et al. Bacterial chitobiase structure provides insight into catalytic mechanism and the basis of Tay–Sachs disease , 1996, Nature Structural Biology.
[41] J. Stirling,et al. Localization of the pro‐sequence within the total deduced primary structure of human β‐hexosaminidase B , 1988, FEBS letters.
[42] S. Withers,et al. NAG-thiazoline, An N-Acetyl-β-hexosaminidase Inhibitor That Implicates Acetamido Participation , 1996 .
[43] S. Kornfeld. Trafficking of lysosomal enzymes in normal and disease states. , 1986, The Journal of clinical investigation.
[44] S. Withers,et al. Characterization of the Glu and Asp residues in the active site of human beta-hexosaminidase B. , 2001, Biochemistry.
[45] G. Dawson,et al. Molecular basis of an adult form of beta-hexosaminidase B deficiency with motor neuron disease. , 1991, Biochemical and biophysical research communications.
[46] G N Murshudov,et al. Use of TLS parameters to model anisotropic displacements in macromolecular refinement. , 2001, Acta crystallographica. Section D, Biological crystallography.
[47] F. Rastinejad,et al. Crystal structure of human GM2-activator protein with a novel beta-cup topology. , 2000, Journal of molecular biology.
[48] S. Withers,et al. Role of beta Arg211 in the active site of human beta-hexosaminidase B. , 2000, Biochemistry.
[49] Toshiaki Tanaka,et al. A Novel Missense Mutation (C522Y) Is Present in the β-Hexosaminidase β-Subunit Gene of a Japanese Patient with Infantile Sandhoff Disease , 1995 .
[50] H. Willard,et al. Molecular heterogeneity in the infantile and juvenile forms of Sandhoff disease (O-variant GM2 gangliosidosis). , 1986, The Journal of biological chemistry.
[51] M. Sternberg,et al. Modelling protein docking using shape complementarity, electrostatics and biochemical information. , 1997, Journal of molecular biology.
[52] K. Sandhoff,et al. Complete analysis of the glycosylation and disulfide bond pattern of human beta-hexosaminidase B by MALDI-MS. , 2001, Glycobiology.
[53] M. James,et al. Structural and Functional Characterization of Streptomyces plicatus β-N-Acetylhexosaminidase by Comparative Molecular Modeling and Site-directed Mutagenesis* , 1998, The Journal of Biological Chemistry.
[54] R J Read,et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.
[55] Yoshiyuki Suzuki,et al. A new point mutation within exon 5 of β‐hexosaminidase α gene in a Japanese infant with Tay‐Sachs disease , 1990 .
[56] P. Kraulis. A program to produce both detailed and schematic plots of protein structures , 1991 .
[57] S. Withers,et al. Catalysis by hen egg-white lysozyme proceeds via a covalent intermediate , 2001, Nature.
[58] S. Withers,et al. Crystallographic Evidence for Substrate-assisted Catalysis in a Bacterial β-Hexosaminidase* , 2001, The Journal of Biological Chemistry.
[59] G. Vavougios,et al. Identification of functional domains within the alpha and beta subunits of beta-hexosaminidase A through the expression of alpha-beta fusion proteins. , 1996, Biochemistry.
[60] Craig J. Thalhauser,et al. Role of N-Linked Oligosaccharide Flexibility in Mannose Phosphorylation of Lysosomal Enzyme Cathepsin L* , 2002, The Journal of Biological Chemistry.
[61] D. Mahuran. Characterization of human placental beta-hexosaminidase I2. Proteolytic processing intermediates of hexosaminidase A. , 1990, The Journal of biological chemistry.
[62] D. Mahuran,et al. Translation initiation in the HEXB gene encoding the beta-subunit of human beta-hexosaminidase. , 1990, The Journal of biological chemistry.
[63] A. Sali,et al. Modeling of loops in protein structures , 2000, Protein science : a publication of the Protein Society.
[64] B. O'dowd,et al. Oligosaccharide structure and amino acid sequence of the major glycopeptides of mature human beta-hexosaminidase. , 1988, Biochemistry.
[65] S. Michel,et al. Quantitative correlation between the residual activity of β-hexosaminidase A and arylsulfatase A and the severity of the resulting lysosomal storage disease , 1992, Human Genetics.
[66] K. Sandhoff,et al. Complete localization of disulfide bonds in GM2 activator protein , 1998, Protein science : a publication of the Protein Society.
[67] A. Cantor,et al. Phosphorylation of Asn-linked oligosaccharides located at novel sites on the lysosomal enzyme cathepsin D. , 1992, The Journal of biological chemistry.
[68] H. Kresse,et al. Liberation of N-acetylglucosamine-6-sulfate by human beta-N-acetylhexosaminidase A. , 1981, The Journal of biological chemistry.
[69] K. Sharp,et al. Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons , 1991, Proteins.
[70] M. Ribeiro,et al. GM2-gangliosidosis B1 variant: analysis of beta-hexosaminidase alpha gene mutations in 11 patients from a defined region in Portugal. , 1991, American journal of human genetics.
[71] G. Legler,et al. (±)-6-Acetamido-1,2-anhydro-6-deoxy-myo-inositol: a tight-binding inhibitor and pseudosubstrate for N-acetyl-β-glucosaminidases , 1992 .
[72] Spencer J. Williams,et al. Aspartate 313 in the Streptomyces plicatusHexosaminidase Plays a Critical Role in Substrate-assisted Catalysis by Orienting the 2-Acetamido Group and Stabilizing the Transition State* , 2002, The Journal of Biological Chemistry.
[73] Thomas C. Terwilliger,et al. Electronic Reprint Biological Crystallography Maximum-likelihood Density Modification , 2022 .
[74] D. Mahuran,et al. The Pro-Peptide of the Proβ-Polypeptide Chain of Human β-Hexosaminidase Is Necessary for Proper Protein Folding and Exit from the Endoplasmic Reticulum , 1994 .
[75] D. Mahuran,et al. Proteolytic processing of pro-alpha and pro-beta precursors from human beta-hexosaminidase. Generation of the mature alpha and beta a beta b subunits. , 1988, The Journal of biological chemistry.
[76] D. Mahuran,et al. The subunit and polypeptide structure of hexosaminidases from human placenta. , 1980, Canadian journal of biochemistry.
[77] D. Mahuran. Biochemical consequences of mutations causing the GM2 gangliosidoses. , 1999, Biochimica et biophysica acta.
[78] David R. Rose,et al. Detailed structural analysis of glycosidase/inhibitor interactions: complexes of Cex from Cellulomonas fimi with xylobiose-derived aza-sugars. , 2000, Biochemistry.
[79] Z. Otwinowski,et al. [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.
[80] A Bairoch,et al. New families in the classification of glycosyl hydrolases based on amino acid sequence similarities. , 1993, The Biochemical journal.
[81] A. Oppenheim,et al. Structures of chitobiase mutants complexed with the substrate Di-N-acetyl-d-glucosamine: the catalytic role of the conserved acidic pair, aspartate 539 and glutamate 540. , 2000, Journal of molecular biology.
[82] J. Zieleński,et al. A mutation common in non‐jewish Tay–Sachs disease: Frequency and RNA studies , 1992, Human mutation.
[83] R. Salvayre,et al. Significance of two point mutations present in each HEXB allele of patients with adult GM2 gangliosidosis (Sandhoff disease) homozygosity for the Ile207-->Val substitution is not associated with a clinical or biochemical phenotype. , 1996, Biochimica et biophysica acta.
[84] K. Tao,et al. Lysine-based Structure Responsible for Selective Mannose Phosphorylation of Cathepsin D and Cathepsin L Defines a Common Structural Motif for Lysosomal Enzyme Targeting* , 1998, The Journal of Biological Chemistry.
[85] Collaborative Computational,et al. The CCP4 suite: programs for protein crystallography. , 1994, Acta crystallographica. Section D, Biological crystallography.
[86] J. Thornton,et al. PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .
[87] R. Proia,et al. Analysis of the glycosylation and phosphorylation of the lysosomal enzyme, beta-hexosaminidase B, by site-directed mutagenesis. , 1989, The Journal of biological chemistry.
[88] S. Withers,et al. Stereochemistry and kinetics of the hydration of 2-acetamido-D-glucal by beta-N-acetylhexosaminidases. , 1994, Biochemistry.
[89] A. Cantor,et al. Lysosomal enzyme phosphorylation. II. Protein recognition determinants in either lobe of procathepsin D are sufficient for phosphorylation of both the amino and carboxyl lobe oligosaccharides. , 1992, The Journal of biological chemistry.