On detection and assessment of statistical significance of Genomic Islands
暂无分享,去创建一个
Raghunath Chatterjee | Probal Chaudhuri | Keya Chaudhuri | P. Chaudhuri | K. Chaudhuri | R. Chatterjee
[1] D. Swan,et al. Comparative genome hybridization of Streptococcus mutans strains. , 2007, Oral microbiology and immunology.
[2] Georgios S. Vernikos,et al. Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands , 2006, Bioinform..
[3] Raghunath Chatterjee,et al. Unsupervised statistical identification of genomic islands using oligonucleotide distributions with application toVibrio genomes , 2006 .
[4] Carsten Damm,et al. Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models , 2006, BMC Bioinformatics.
[5] Kumar Rajakumar,et al. A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria , 2006, Nucleic acids research.
[6] Korine S. E. Ung,et al. Evidence of a Large Novel Gene Pool Associated with Prokaryotic Genomic Islands , 2005, PLoS genetics.
[7] Sung Ho Yoon,et al. A computational approach for identifying pathogenicity islands in prokaryotic genomes , 2005, BMC Bioinformatics.
[8] Aristotelis Tsirigos,et al. A sensitive, support-vector-machine method for the detection of horizontal gene transfers in viral, archaeal and bacterial genomes , 2005, Nucleic acids research.
[9] Aristotelis Tsirigos,et al. A new computational method for the detection of horizontal gene transfer events , 2005, Nucleic acids research.
[10] Ulrich Dobrindt,et al. Genomic islands in pathogenic and environmental microorganisms , 2004, Nature Reviews Microbiology.
[11] Ren Zhang,et al. A systematic method to identify genomic islands and its applications in analyzing the genomes of Corynebacterium glutamicum and Vibrio vulnificus CMCP6 chromosome I , 2004, Bioinform..
[12] Rainer Merkl,et al. SIGI: score-based identification of genomic islands , 2004, BMC Bioinformatics.
[13] Qiang Tu,et al. Detecting pathogenicity islands and anomalous gene clusters by iterative discriminant analysis. , 2003, FEMS microbiology letters.
[14] K. Nelson,et al. Global features of the Pseudomonas putida KT2440 genome sequence. , 2002, Environmental microbiology.
[15] Il'ina Ts,et al. [Bacterial genomic islands: organization, function, and role in evolution]. , 2002 .
[16] Kim Rutherford,et al. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18 , 2001, Nature.
[17] S Karlin,et al. Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes. , 2001, Trends in microbiology.
[18] G. Weinstock,et al. Genomics and bacterial pathogenesis. , 2000, Emerging infectious diseases.
[19] J. Lake,et al. Horizontal gene transfer among genomes: the complexity hypothesis. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[20] S Karlin,et al. Compositional biases of bacterial genomes and evolutionary implications , 1997, Journal of bacteriology.
[21] J Hacker,et al. Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution , 1997, Molecular microbiology.
[22] Howard Ochman,et al. Pathogenicity Islands: Bacterial Evolution in Quantum Leaps , 1996, Cell.
[23] S. Pietrokovski,et al. Comparing nucleotide and protein sequences by linguistic methods. , 1994, Journal of biotechnology.
[24] E. Trifonov,et al. Imported sequences in the mitochondrial yeast genome identified by nucleotide linguistics. , 1992, Gene.
[25] R. Randles,et al. Introduction to the Theory of Nonparametric Statistics , 1991 .
[26] E N Trifonov,et al. Linguistic measure of taxonomic and functional relatedness of nucleotide sequences. , 1990, Journal of biomolecular structure & dynamics.
[27] J Hacker,et al. Deletions of chromosomal regions coding for fimbriae and hemolysins occur in vitro and in vivo in various extraintestinal Escherichia coli isolates. , 1990, Microbial pathogenesis.
[28] Douglas A. Wolfe,et al. Introduction to the Theory of Nonparametric Statistics. , 1980 .
[29] H. B. Mann,et al. On a Test of Whether one of Two Random Variables is Stochastically Larger than the Other , 1947 .
[30] F. Wilcoxon. Individual Comparisons by Ranking Methods , 1945 .
[31] David Hinkley,et al. Bootstrap Methods: Another Look at the Jackknife , 2008 .
[32] M. Kenward,et al. An Introduction to the Bootstrap , 2007 .
[33] Kelly P. Williams,et al. Islander: a database of integrative islands in prokaryotic genomes, the associated integrases and their DNA site specificities , 2004, Nucleic Acids Res..
[34] Santiago Garcia-Vallvé,et al. HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes , 2003, Nucleic Acids Res..
[35] Micah Acinapura,et al. Computational DNA Sequence Analysis , 2003 .
[36] T. Il’ina,et al. [Bacterial genomic islands: organization, function, and role in evolution]. , 2002, Molekuliarnaia biologiia.
[37] J. Hacker,et al. Pathogenicity islands and the evolution of microbes. , 2000, Annual review of microbiology.
[38] J. Hacker,et al. Pathogenicity islands and other mobile virulence elements , 1999 .
[39] J. Hacker,et al. The Concept of Pathogenicity Islands , 1999 .