New protein engineering approaches to multivalent and bispecific antibody fragments.

Multivalency is one of the hallmarks of antibodies, by which enormous gains in functional affinity, and thereby improved performance in vivo and in a variety of in vitro assays are achieved. Improved in vivo targeting and more selective localization are another consequence of multivalency. We summarize recent progress in engineering multivalency from recombinant antibody fragments by using miniantibodies (scFv fragments linked with hinges and oligomerization domains), spontaneous scFv dimers with short linkers (diabodies), or chemically crosslinked antibody fragments. Directly related to this are efforts of bringing different binding sites together to create bispecific antibodies. For this purpose, chemically linked fragments, diabodies, scFv-scFv tandems and bispecific miniantibodies have been investigated. Progress in E. coli expression technology makes the amounts necessary for clinical studies now available for suitably engineered fragments. We foresee therapeutic advances from a modular, systematic approach to optimizing pharmacokinetics, stability and functional affinity, which should prove possible with the new recombinant molecular designs.

[1]  J. Bluestone,et al.  Specific targeting of cytotoxic T cells by anti-T3 linked to anti-target cell antibody , 1985, Nature.

[2]  R. R. Robinson,et al.  Escherichia coli secretion of an active chimeric antibody fragment. , 1988, Science.

[3]  K. D. Hardman,et al.  In vivo tumor targeting of a recombinant single-chain antigen-binding protein. , 1990, Journal of the National Cancer Institute.

[4]  H. Lenz,et al.  Reconstitution of functionally active antibody directed against creatine kinase from separately expressed heavy and light chains in non-lymphoid cells. , 1987, Gene.

[5]  K. D. Hardman,et al.  Single-chain antigen-binding proteins. , 1988, Science.

[6]  Tristan J. Vaughan,et al.  Human Antibodies with Sub-nanomolar Affinities Isolated from a Large Non-immunized Phage Display Library , 1996, Nature Biotechnology.

[7]  S. McKnight,et al.  The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. , 1988, Science.

[8]  R. Williams,et al.  Specific killing of lymphoma cells by cytotoxic T-cells mediated by a bispecific diabody. , 1996, Protein engineering.

[9]  A. Plückthun,et al.  Expression of functional antibody Fv and Fab fragments in Escherichia coli. , 1989, Methods in enzymology.

[10]  A. Blondel,et al.  Engineering the quaternary structure of an exported protein with a leucine zipper. , 1991, Protein engineering.

[11]  M. Wabl,et al.  Immunoglobulin class switch recombination. , 1993, Annual review of immunology.

[12]  C. Sander,et al.  Database algorithm for generating protein backbone and side-chain co-ordinates from a C alpha trace application to model building and detection of co-ordinate errors. , 1991, Journal of molecular biology.

[13]  A. Plückthun,et al.  Engineered turns of a recombinant antibody improve its in vivo folding. , 1995, Protein engineering.

[14]  S L Morrison,et al.  Effect of altered CH2-associated carbohydrate structure on the functional properties and in vivo fate of chimeric mouse-human immunoglobulin G1 , 1994, The Journal of experimental medicine.

[15]  D M Crothers,et al.  The influence of polyvalency on the binding properties of antibodies. , 1972, Immunochemistry.

[16]  M. Betenbaugh,et al.  Effects of co-expressing chaperone BiP on functional antibody production in the baculovirus system. , 1994, Protein expression and purification.

[17]  D. Phillips,et al.  The three-dimensional structure of the carbohydrate within the Fc fragment of immunoglobulin G. , 1983, Biochemical Society transactions.

[18]  R. Owens,et al.  Improved tumor targeting with chemically cross-linked recombinant antibody fragments. , 1994, Cancer research.

[19]  A. C. Cuello,et al.  [17] Bispecific monoclonal antibodies from hybrid hybridomas , 1986 .

[20]  Development of humanized bispecific antibodies reactive with cytotoxic lymphocytes and tumor cells overexpressing the HER2 protooncogene , 1992, The Journal of experimental medicine.

[21]  B. Groner,et al.  A bivalent single‐chain antibody‐toxin specific for ErbB‐2 and the EGF receptor , 1996, International journal of cancer.

[22]  G. Winter,et al.  High-affinity antigen binding by chelating recombinant antibodies (CRAbs). , 1995, Journal of molecular biology.

[23]  W. Fiers,et al.  Disulphide bridge formation in the periplasm of Escherichia coli: β‐lactamase::human lgG3 hinge fusions as a model system , 1992, Molecular microbiology.

[24]  R. Raag,et al.  Crystallization of single-chain Fv proteins. , 1993, Journal of molecular biology.

[25]  L. Nieba,et al.  Competition BIAcore for measuring true affinities: large differences from values determined from binding kinetics. , 1996, Analytical biochemistry.

[26]  M. Geiser,et al.  High-level expression in insect cells and purification of secreted monomeric single-chain Fv antibodies. , 1996, Journal of immunological methods.

[27]  M. Whitlow,et al.  Multivalent Fvs: characterization of single-chain Fv oligomers and preparation of a bispecific Fv. , 1994, Protein engineering.

[28]  R. Bruccoleri,et al.  Protein engineering of antibody binding sites: recovery of specific activity in an anti-digoxin single-chain Fv analogue produced in Escherichia coli. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[29]  K R Godfrey,et al.  Effect of dose, molecular size, affinity, and protein binding on tumor uptake of antibody or ligand: a biomathematical model. , 1989, Cancer research.

[30]  T. Holak,et al.  Structural and dynamic properties of the Fv fragment and the single-chain Fv fragment of an antibody in solution investigated by heteronuclear three-dimensional NMR spectroscopy. , 1994, Biochemistry.

[31]  J. Huston,et al.  Medical applications of single-chain antibodies. , 1993, International reviews of immunology.

[32]  A. Plückthun Antibodies from Escherichia coli , 1990, Nature.

[33]  L A Boyle,et al.  Heteroantibody duplexes target cells for lysis by cytotoxic T lymphocytes. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[34]  Alexander McPherson,et al.  The three-dimensional structure of an intact monoclonal antibody for canine lymphoma , 1992, Nature.

[35]  A. Plückthun,et al.  Secretion and in vivo folding of the Fab fragment of the antibody McPC603 in Escherichia coli: influence of disulphides and cis-prolines. , 1991, Protein engineering.

[36]  P F Davison,et al.  Preparation of bispecific antibodies by chemical recombination of monoclonal immunoglobulin G1 fragments. , 1985, Science.

[37]  S. Gillies,et al.  Expression and secretion of an assembled tetrameric CH2-deleted antibody in E. coli. , 1992, Human antibodies and hybridomas.

[38]  W. Harris,et al.  Spontaneous assembly of bivalent single chain antibody fragments in Escherichia coli. , 1994, Molecular immunology.

[39]  S. Carroll,et al.  Potent anti-CD5 ricin A chain immunoconjugates from bacterially produced Fab' and F(ab')2. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[40]  A. Hiatt Antibodies produced in plants , 1990, Nature.

[41]  E. Weiler,et al.  Expression of a single-chain Fv antibody against abscisic acid creates a wilty phenotype in transgenic tobacco. , 1995, The Plant journal : for cell and molecular biology.

[42]  H. Lenz,et al.  Expression of heterobispecific antibodies by genes transfected into producer hybridoma cells. , 1990, Gene.

[43]  P. Carter,et al.  Toward the production of bispecific antibody fragments for clinical applications. , 1995, Journal of hematotherapy.

[44]  M. Little,et al.  Recombinant single-chain Fv fragments carrying C-terminal cysteine residues: production of bivalent and biotinylated miniantibodies. , 1994, Molecular immunology.

[45]  P. S. Kim,et al.  Mechanism of specificity in the Fos-Jun oncoprotein heterodimer , 1992, Cell.

[46]  A. Plückthun,et al.  Tetravalent miniantibodies with high avidity assembling in Escherichia coli. , 1995, Journal of molecular biology.

[47]  A. Plückthun,et al.  Assembly of a functional immunoglobulin Fv fragment in Escherichia coli. , 1988, Science.

[48]  W. DeGrado,et al.  Design of a 4-helix bundle protein: synthesis of peptides which self-associate into a helical protein , 1987 .

[49]  Osami Kanagawa,et al.  Hybrid antibodies can target sites for attack by T cells , 1985, Nature.

[50]  G. Walter,et al.  Phage diabody repertoires for selection of large numbers of bispecific antibody fragments , 1996, Nature Biotechnology.

[51]  F. Karush,et al.  Antibody affinity—III the role of multivalence , 1972 .

[52]  S. L. Wang,et al.  Preparation of a bispecific F(ab')2 targeted to the human IL-2 receptor. , 1995, Journal of hematotherapy.

[53]  E. Haber,et al.  Protein engineering of single-chain Fv analogs and fusion proteins. , 1991, Methods in enzymology.

[54]  K. D. Hardman,et al.  An improved linker for single-chain Fv with reduced aggregation and enhanced proteolytic stability. , 1993, Protein engineering.

[55]  I. Pastan,et al.  A recombinant immunotoxin containing a disulfide-stabilized Fv fragment. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[56]  A. Sarai,et al.  Comparative thermodynamic analyses of the Fv, Fab* and Fab and Fab fragments of anti‐dansyl mouse monoclonal antibody , 1995 .

[57]  A. Plückthun,et al.  Pharmacokinetic properties of bivalent miniantibodies and comparison to other immunoglobulin forms , 1995 .

[58]  J. Brisson,et al.  The glycopeptides of the mouse immunoglobulin A T15. , 1990, Molecular immunology.

[59]  M. Whitlow,et al.  Single-chain Fv proteins and their fusion proteins , 1991 .

[60]  L E Williams,et al.  Minibody: A novel engineered anti-carcinoembryonic antigen antibody fragment (single-chain Fv-CH3) which exhibits rapid, high-level targeting of xenografts. , 1996, Cancer research.

[61]  T. Coelho-Sampaio,et al.  Inter-active-site distance and solution dynamics of a bivalent-bispecific single-chain antibody molecule. , 1994, Biochemistry.

[62]  M. Frank,et al.  Complement-immunoglobulin interactions. , 1995, Current opinion in immunology.

[63]  César Milstein,et al.  Man-made antibodies , 1991, Nature.

[64]  A. Hiatt,et al.  Characterization and applications of antibodies produced in plants. , 1993, International reviews of immunology.

[65]  L E Williams,et al.  Tumor localization of anti-CEA single-chain Fvs: improved targeting by non-covalent dimers. , 1996, Immunotechnology : an international journal of immunological engineering.

[66]  E. Padlan,et al.  Anatomy of the antibody molecule. , 1994, Molecular immunology.

[67]  S. Songsivilai,et al.  Bispecific antibody: a tool for diagnosis and treatment of disease , 1990, Clinical and experimental immunology.

[68]  D. Burton Immunoglobulin G: functional sites. , 1985, Molecular immunology.

[69]  R. Williams,et al.  Crystal structure of a diabody, a bivalent antibody fragment. , 1994, Structure.

[70]  A. Feinstein,et al.  Conformation of the Free and Antigen-bound IgM Antibody Molecules , 1969, Nature.

[71]  T Prospero,et al.  "Diabodies": small bivalent and bispecific antibody fragments. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[72]  M. Hurle,et al.  Protein engineering techniques for antibody humanization. , 1994, Current opinion in biotechnology.

[73]  A. Chaffotte,et al.  Measurements of the true affinity constant in solution of antigen-antibody complexes by enzyme-linked immunosorbent assay. , 1985, Journal of immunological methods.

[74]  T. Yokota,et al.  Construction, binding properties, metabolism, and tumor targeting of a single-chain Fv derived from the pancarcinoma monoclonal antibody CC49. , 1991, Cancer research.

[75]  A. Plückthun,et al.  Reliable cloning of functional antibody variable domains from hybridomas and spleen cell repertoires employing a reengineered phage display system. , 1997, Journal of immunological methods.

[76]  A. Cattaneo,et al.  Transgenic plants expressing a functional single-chain Fv antibody are specifically protected from virus attack , 1993, Nature.

[77]  D. Stephany,et al.  Production of target-specific effector cells using hetero-cross-linked aggregates containing anti-target cell and anti-Fc gamma receptor antibodies , 1984, The Journal of experimental medicine.

[78]  A. Plückthun,et al.  Miniantibodies: use of amphipathic helices to produce functional, flexibly linked dimeric FV fragments with high avidity in Escherichia coli. , 1992, Biochemistry.

[79]  R. Webster,et al.  Recombinant anti-sialidase single-chain variable fragment antibody. Characterization, formation of dimer and higher-molecular-mass multimers and the solution of the crystal structure of the single-chain variable fragment/sialidase complex. , 1994, European journal of biochemistry.

[80]  E. N. Kaufman,et al.  Measurement of mass transport and reaction parameters in bulk solution using photobleaching. Reaction limited binding regime. , 1991, Biophysical journal.

[81]  D. Kranz,et al.  Properties of bispecific single chain antibodies expressed in Escherichia coli. , 1995, Journal of hematotherapy.

[82]  M. Moser,et al.  Production and characterization of bispecific single-chain antibody fragments. , 1995, Molecular immunology.

[83]  C. Barbas,et al.  Selection and evolution of high-affinity human anti-viral antibodies. , 1996, Trends in biotechnology.

[84]  D. Wishart,et al.  Vl-linker-Vh orientation-dependent expression of single chain Fv-containing an engineered disulfide-stabilized bond in the framework regions. , 1995, Journal of biochemistry.

[85]  J. Trill,et al.  Production of monoclonal antibodies in COS and CHO cells. , 1995, Current opinion in biotechnology.

[86]  I. Pastan,et al.  A method for increasing the yield of properly folded recombinant fusion proteins: single-chain immunotoxins from renaturation of bacterial inclusion bodies. , 1992, Analytical biochemistry.

[87]  K. Potter,et al.  Antibody production in the baculovirus expression system. , 1993, International reviews of immunology.

[88]  P. Choudary,et al.  Generation of an expression library in the baculovirus expression vector system. , 1995, Journal of virological methods.

[89]  M. Little,et al.  Affinity enhancement of a recombinant antibody: formation of complexes with multiple valency by a single-chain Fv fragment-core streptavidin fusion. , 1996, Protein engineering.

[90]  R. R. Robinson,et al.  Secretion of functional antibody and Fab fragment from yeast cells. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[91]  P. Wood,et al.  Chemical synthesis of bispecific monoclonal antibodies: potential advantages in immunoassay systems. , 1994, Journal of immunological methods.

[92]  P. S. Kim,et al.  X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil. , 1991, Science.

[93]  M. Penttilä,et al.  Production of functional IgM Fab fragments by Saccharomyces cerevisiae. , 1991, Journal of biotechnology.

[94]  L. Regan,et al.  Characterization of a helical protein designed from first principles. , 1988, Science.

[95]  A. Plückthun Mono‐ and Bivalent Antibody Fragments Produced in Escherichia coli: Engineering, Folding and Antigen Binding , 1992, Immunological reviews.

[96]  J. S. Chang,et al.  Affinity enhancement of bispecific antibody against two different epitopes in the same antigen. , 1990, Biochemical and biophysical research communications.

[97]  Y. Li,et al.  Structure of a single-chain antibody variable domain (Fv) fragment complexed with a carbohydrate antigen at 1.7-A resolution. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[98]  A. Lawson,et al.  Multimerization behaviour of single chain Fv variants for the tumour-binding antibody B72.3. , 1994, Protein engineering.

[99]  J. Barbet,et al.  Bispecific-antibody-mediated targeting of radiolabeled bivalent haptens: theoretical, experimental and clinical results. , 1992, International journal of cancer. Supplement = Journal international du cancer. Supplement.

[100]  W. Göhring,et al.  Synthesis of the bis-cystinyl-fragment 225-232/225'-232' of the human IgGl hinge region. , 2009, International journal of peptide and protein research.

[101]  A. C. Cuello,et al.  Hybrid hybridomas and their use in immunohistochemistry , 1983, Nature.

[102]  James C. Hu,et al.  Sequence requirements for coiled-coils: analysis with lambda repressor-GCN4 leucine zipper fusions. , 1990, Science.

[103]  M. Mack,et al.  A small bispecific antibody construct expressed as a functional single-chain molecule with high tumor cell cytotoxicity. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[104]  J. Weinstein,et al.  Micropharmacology of monoclonal antibodies in solid tumors: direct experimental evidence for a binding site barrier. , 1992, Cancer research.

[105]  D Eisenberg,et al.  Crystal structure of alpha 1: implications for protein design. , 1990, Science.

[106]  R. Karlsson,et al.  Real-time competitive kinetic analysis of interactions between low-molecular-weight ligands in solution and surface-immobilized receptors. , 1994, Analytical biochemistry.

[107]  T. Yokota,et al.  Rapid tumor penetration of a single-chain Fv and comparison with other immunoglobulin forms. , 1992, Cancer research.

[108]  R K Jain,et al.  Biodistribution of monoclonal antibodies: scale-up from mouse to human using a physiologically based pharmacokinetic model. , 1995, Cancer research.

[109]  A. Plückthun,et al.  High volumetric yields of functional dimeric miniantibodies in Escherichia coli, using an optimized expression vector and high-cell-density fermentation under non-limited growth conditions , 1996, Applied Microbiology and Biotechnology.

[110]  R. O'Kennedy,et al.  Bifunctional antibodies: concept, production and applications. , 1990, Biochimica et biophysica acta.

[111]  G. Winter,et al.  Making antibodies by phage display technology. , 1994, Annual review of immunology.

[112]  P. S. Kim,et al.  Evidence that the leucine zipper is a coiled coil. , 1989, Science.

[113]  J Deisenhofer,et al.  Crystallographic refinement and atomic models of the intact immunoglobulin molecule Kol and its antigen-binding fragment at 3.0 A and 1.0 A resolution. , 1980, Journal of molecular biology.

[114]  D Eisenberg,et al.  The design, synthesis, and crystallization of an alpha‐helical peptide , 1986, Proteins.

[115]  L. Presta,et al.  'Knobs-into-holes' engineering of antibody CH3 domains for heavy chain heterodimerization. , 1996, Protein engineering.

[116]  F. Karush AFFINITY AND THE IMMUNE RESPONSE * , 1970, Annals of the New York Academy of Sciences.

[117]  J. Baenziger,et al.  Thermal stabilization of a single‐chain Fv antibody fragment by introduction of a disulphide bond , 1995, FEBS letters.

[118]  P. S. Kim,et al.  A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants. , 1993, Science.

[119]  T. Logtenberg,et al.  Leucine Zipper Dimerized Bivalent and Bispecific scFv Antibodies from a Semi-synthetic Antibody Phage Display Library (*) , 1996, The Journal of Biological Chemistry.

[120]  J. Weinstein,et al.  The Pharmacology of Monoclonal Antibodies a , 1987, Annals of the New York Academy of Sciences.

[121]  R. Glockshuber,et al.  A comparison of strategies to stabilize immunoglobulin Fv-fragments. , 1990, Biochemistry.

[122]  M. J. Mattes,et al.  Binding parameters of antibodies reacting with multivalent antigens: functional affinity or pseudo-affinity. , 1997, Journal of immunological methods.

[123]  Leroy Hood,et al.  IgG antibodies to phosphorylcholine exhibit more diversity than their IgM counterparts , 1981, Nature.

[124]  N. Pavletich,et al.  Crystal structure of the tetramerization domain of the p53 tumor suppressor at 1.7 angstroms , 1995, Science.