Analysis of the complete mitochondrial genome and characterization of diverse NUMTs of Macaca leonina.

[1]  Zhijin Liu,et al.  Complete mitochondrial genome of the crested black macaque (Macaca nigra) , 2016, Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis.

[2]  Juan Jiang,et al.  The complete mitochondrial genome of Assamese Macaques (Macaca assamensis) , 2016, Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis.

[3]  Yong-tang Zheng,et al.  Flow cytometric characterizations of leukocyte subpopulations in the peripheral blood of northern pig-tailed macaques (Macaca leonina). , 2014, Dong wu xue yan jiu = Zoological research.

[4]  Yun-Qiang Tang,et al.  The complete mitochondrial genome of Japanese macaque, Macaca fuscata fuscata (Macaca, Cercopithecinae) , 2014, Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis.

[5]  M. Brameier,et al.  Mitogenomics of the Old World monkey tribe Papionini , 2014, BMC Evolutionary Biology.

[6]  Ya-ping Zhang,et al.  Mitochondrial genomes of domestic animals need scrutiny , 2014, Molecular ecology.

[7]  P. Bieniasz,et al.  HIV-1–induced AIDS in monkeys , 2014, Science.

[8]  Yong-tang Zheng,et al.  Replication potentials of HIV-1/HSIV in PBMCs from northern pig-tailed macaque (Macaca leonina). , 2014, Dong wu xue yan jiu = Zoological research.

[9]  Yong-tang Zheng,et al.  Analysis of immunoglobulin, complements and CRP levels in serum of captive northern pig-tailed macaques (Macaca leonina). , 2014, Dong wu xue yan jiu = Zoological research.

[10]  Koichiro Tamura,et al.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. , 2013, Molecular biology and evolution.

[11]  Sabrina Simon,et al.  A comparative analysis of complete mitochondrial genomes among Hexapoda. , 2013, Molecular phylogenetics and evolution.

[12]  Yong-tang Zheng,et al.  [Use and research of pigtailed macaques in nonhuman primate HIV/AIDS models]. , 2013, Dong wu xue yan jiu = Zoological research.

[13]  M. Frith,et al.  Mammalian NUMT insertion is non-random , 2012, Nucleic acids research.

[14]  Yong-Gang Yao,et al.  Evaluating the phylogenetic position of Chinese tree shrew (Tupaia belangeri chinensis) based on complete mitochondrial genome: implication for using tree shrew as an alternative experimental animal to primates in biomedical research. , 2012, Journal of genetics and genomics = Yi chuan xue bao.

[15]  W. Martin,et al.  Molecular Poltergeists: Mitochondrial DNA Copies (numts) in Sequenced Nuclear Genomes , 2010, PLoS genetics.

[16]  Einat Hazkani-Covo Mitochondrial insertions into primate nuclear genomes suggest the use of numts as a tool for phylogeny. , 2009, Molecular biology and evolution.

[17]  Ya-ping Zhang,et al.  Genotyping of TRIM5 locus in northern pig-tailed macaques (Macaca leonina), a primate species susceptible to Human Immunodeficiency Virus type 1 infection , 2009, Retrovirology.

[18]  M. Jensen-Seaman,et al.  A Comparative Approach Shows Differences in Patterns of Numt Insertion During Hominoid Evolution , 2009, Journal of Molecular Evolution.

[19]  F. Zou,et al.  The complete mitochondrial genome of Macaca thibetana and a novel nuclear mitochondrial pseudogene. , 2009, Gene.

[20]  S. Covo,et al.  Numt-Mediated Double-Strand Break Repair Mitigates Deletions during Primate Genome Evolution , 2008, PLoS genetics.

[21]  A Salas,et al.  Pseudomitochondrial genome haunts disease studies , 2008, Journal of Medical Genetics.

[22]  M. Bruford,et al.  Distinguishing gorilla mitochondrial sequences from nuclear integrations and PCR recombinants: guidelines for their diagnosis in complex sequence databases. , 2007, Molecular phylogenetics and evolution.

[23]  A. Eyre-Walker,et al.  A broad survey of recombination in animal mitochondria. , 2004, Molecular biology and evolution.

[24]  Jeong W. Pak,et al.  Molecular analyses of mtDNA deletion mutations in microdissected skeletal muscle fibers from aged rhesus monkeys , 2004, Aging cell.

[25]  A. Helbig,et al.  Origin and Evolution of Tandem Repeats in the Mitochondrial DNA Control Region of Shrikes (Lanius spp.) , 2004, Journal of Molecular Evolution.

[26]  K. Kidd,et al.  Nuclear integrations of mitochondrial DNA in gorillas , 2004, American Journal of Primatology.

[27]  Sudhir Kumar,et al.  MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment , 2004, Briefings Bioinform..

[28]  Ú. Árnason,et al.  A complete mitochondrial DNA molecule of the white-handed gibbon, Hylobates lar, and comparison among individual mitochondrial genes of all hominoid genera , 2004 .

[29]  A. Janke,et al.  Molecular estimates of primate divergences and new hypotheses for primate dispersal and the origin of modern humans. , 2004, Hereditas.

[30]  S. Pääbo,et al.  Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apes , 2004, Molecular ecology.

[31]  D. Penny,et al.  Pika and vole mitochondrial genomes increase support for both rodent monophyly and glires. , 2002, Gene.

[32]  M. Woischnik,et al.  Pattern of organization of human mitochondrial pseudogenes in the nuclear genome. , 2002, Genome research.

[33]  A. Janke,et al.  Mammalian mitogenomic relationships and the root of the eutherian tree , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[34]  J. Schmitz,et al.  The complete mitochondrial sequence of Tarsius bancanus: evidence for an extensive nucleotide compositional plasticity of primate mitochondrial DNA. , 2002, Molecular biology and evolution.

[35]  P. Arctander,et al.  The Human Genome Project reveals a continuous transfer of large mitochondrial fragments to the nucleus. , 2001, Molecular biology and evolution.

[36]  D. Hartl,et al.  Mitochondrial pseudogenes: evolution's misplaced witnesses. , 2001, Trends in ecology & evolution.

[37]  M. Goodman,et al.  Molecular Phylogeny of Old World Monkeys (Cercopithecidae) as Inferred from γ-Globin DNA Sequences , 1999 .

[38]  P J Waddell,et al.  Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect internal conflicts in the data, with special reference to the positions of hedgehog, armadillo, and elephant. , 1999, Systematic biology.

[39]  A. Janke,et al.  Molecular Timing of Primate Divergences as Estimated by Two Nonprimate Calibration Points , 1998, Journal of Molecular Evolution.

[40]  D. Lunt,et al.  Mitochondrial DNA variable number tandem repeats (VNTRs): utility and problems in molecular ecology , 1998, Molecular ecology.

[41]  T. Disotell,et al.  Nuclear gene trees and the phylogenetic relationships of the mangabeys (Primates: Papionini). , 1998, Molecular biology and evolution.

[42]  C. Gissi,et al.  The complete mitochondrial DNA sequence of the rabbit, Oryctolagus cuniculus. , 1998, Genomics.

[43]  T. Dowling,et al.  Evolutionary dynamics of tandem repeats in the mitochondrial DNA control region of the minnow Cyprinella spiloptera. , 1997, Molecular biology and evolution.

[44]  G. Kerth,et al.  Evolution of repeated sequence arrays in the D-loop region of bat mitochondrial DNA. , 1997, Genetics.

[45]  S. Eddy,et al.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. , 1997, Nucleic acids research.

[46]  J. V. López,et al.  Rates of nuclear and cytoplasmic mitochondrial DNA sequence divergence in mammals. , 1997, Molecular biology and evolution.

[47]  Ú. Árnason,et al.  The mitochondrial DNA molecule of sumatran orangutan and a molecular proposal for two (Bornean and Sumatran) species of orangutan , 1996, Journal of Molecular Evolution.

[48]  S. Horai,et al.  Molecular phylogeny of macaques: implications of nucleotide sequences from an 896-base pair region of mitochondrial DNA. , 1996, Molecular biology and evolution.

[49]  C. Gissi,et al.  The guinea-pig is not a rodent , 1996, Nature.

[50]  Ú. Árnason,et al.  A complete sequence of the mitochondrial genome of the western lowland gorilla. , 1996, Molecular biology and evolution.

[51]  J. Blanchard,et al.  Mitochondrial DNA migration events in yeast and humans: integration by a common end-joining mechanism and alternative perspectives on nucleotide substitution patterns. , 1996, Molecular biology and evolution.

[52]  Ú. Árnason,et al.  comparison between the complete mitochondrial DNA sequences ofHomo and the common chimpanzee based on nonchimeric sequences , 1996, Journal of Molecular Evolution.

[53]  N. Perna,et al.  Mitochondrial DNA: Molecular fossils in the nucleus , 1996, Current Biology.

[54]  John M. Hancock,et al.  Generation of VNTRs and heteroplasmy by sequence turnover in the mitochondrial control region of two elephant seal species , 1993, Journal of Molecular Evolution.

[55]  N. Takahata A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[56]  S. Sawyer Statistical tests for detecting gene conversion. , 1989, Molecular biology and evolution.

[57]  D. Rand,et al.  Molecular population genetics of mtDNA size variation in crickets. , 1989, Genetics.

[58]  F. Sanger,et al.  Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome. , 1982, Journal of molecular biology.

[59]  D. A. Clayton,et al.  Sequence and gene organization of mouse mitochondrial DNA , 1981, Cell.

[60]  S. Wright,et al.  The Distribution of Self-Sterility Alleles in Populations. , 1939, Genetics.

[61]  Allan C. Wilson,et al.  Mitochondrial DNA sequences of primates: Tempo and mode of evolution , 2005, Journal of Molecular Evolution.

[62]  Axel Janke,et al.  Phylogenetic Analysis of 18S rRNA and the Mitochondrial Genomes of the Wombat, Vombatus ursinus, and the Spiny Anteater, Tachyglossus aculeatus: Increased Support for the Marsupionta Hypothesis , 2002, Journal of Molecular Evolution.

[63]  A. Janke,et al.  Molecular evidence of an African Phiomorpha-South American Caviomorpha clade and support for Hystricognathi based on the complete mitochondrial genome of the cane rat (Thryonomys swinderianus). , 2001, Molecular phylogenetics and evolution.

[64]  P. Taberlet,et al.  Origin and evolution of homologous repeated sequences in the mitochondrial DNA control region of shrews. , 1996, Molecular biology and evolution.

[65]  A. Baker,et al.  Patterns of sequence variation in the mitochondrial D-loop region of shrews. , 1994, Molecular biology and evolution.

[66]  P. O'Hara,et al.  Length heteroplasmy of sturgeon mitochondrial DNA: an illegitimate elongation model. , 1990, Genetics.