Simulations of Gas-Phase Chemical Reactions: Applications to SN2 Nucleophilic Substitution

Computer simulations and animations of the motion of atoms as a chemical reaction proceeds give a detailed picture of how the reaction occurs at a microscopic level. This information is particularly useful for testing the accuracy of statistical models, which are used to calculate various attributes of chemical reactions. Such simulations and animations, in concert with experimental and ab initio studies, have begun to provide a microscopic picture of the intimate details of a particular class of gas-phase ion-molecule bimolecular reactions known as SN2 nucleophilic substitution. In these reactions, a nucleophile is displaced from a molecule by another nucleophile. The dynamical model of SN2 reactions that emerges from the computer studies, and its relation to statistical theories, is discussed here.

[1]  R. Marcus Unimolecular dissociations and free radical recombination reactions , 1952 .

[2]  W. Hase Variational unimolecular rate theory , 1983 .

[3]  Ahmed H. Zewail,et al.  Femtochemistry: Ultrafast Dynamics of the Chemical Bond , 1994 .

[4]  J. Wolfrum,et al.  Bimolecular Reactions of Vibrationally Excited Molecules , 1980 .

[5]  W. Hase,et al.  Trajectory studies of SN2 nucleophilic substitution. I. Dynamics of Cl−+CH3Cl reactive collisions , 1990 .

[6]  W. B. Knighton,et al.  Gas-phase SN2 reactions of chloride ion with alkyl bromides at atmospheric pressure. Temperature dependence of the rate constants and energies of the transition states , 1993 .

[7]  Michael T. Bowers,et al.  The nonstatistical dissociation dynamics of chloride(bromomethane) Cl-(CH3Br): evidence for vibrational excitation in the products of gas-phase SN2 reactions , 1991 .

[8]  P. Kebarle,et al.  SN2 reactions in the gas phase. Temperature dependence of the rate constants and energies of the transition states. Comparison with solution , 1984 .

[9]  J. Hynes,et al.  Activation to the transition state: reactant and solvent energy flow for a model SN2 reaction in water. , 1991, Journal of the American Chemical Society.

[10]  W. Hase The criterion of minimum state density in unimolecular rate theory. An application to ethane dissociation , 1976 .

[11]  M. Bowers,et al.  Vibrational Excitation in Products of Nucleophilic Substitution: The Dissociation of Metastable X-(CH3Y) in the Gas Phase , 1994 .

[12]  A. Veillard,et al.  Comparative study of some SN2 reactions through ab initio calculations , 1972 .

[13]  C. Klots Reformulation of the quasiequilibrium theory of ionic fragmentation , 1971 .

[14]  R. Marcus,et al.  On the Statistical Theory of Unimolecular Processes , 2007 .

[15]  Haobin Wang,et al.  Trajectory Studies of SN2 Nucleophilic Substitution. 4. Intramolecular and Unimolecular Dynamics of the Cl----CH3Br and ClCH3---Br- Complexes , 1994 .

[16]  William L. Jorgensen,et al.  Energy profile for a nonconcerted SN2 reaction in solution , 1985 .

[17]  G. A. Parker,et al.  Accurate quantum probabilities and threshold behavior of the H+O2 combustion reaction , 1993 .

[18]  D. Cyr,et al.  Photoelectron spectroscopy of the gas-phase SN2 reaction intermediates I-.CH3I and I-.CD3I : distortion of the CH3I at the ion-dipole complex , 1993 .

[19]  G. D. Billing Quantum-classical reaction path model for chemical reactions. IV. The reaction Cl− + CH3Cl → ClCH3 + Cl− , 1992 .

[20]  J. I. Brauman,et al.  Marcus theory applied to reactions with double-minimum potential surfaces , 1986 .

[21]  Robert A. Morris,et al.  Kinetics of the gas-phase reactions of chloride anion, Cl- with CH3Br and CD3Br: experimental evidence for nonstatistical behavior? , 1992 .

[22]  Reaction path Hamiltonian for the gas-phase SN2 nucleophilic substitution reaction , 1989 .

[23]  Haobin Wang,et al.  A Model Multidimensional Analytic Potential Energy Function for the Cl- + CH3Br .fwdarw. ClCH3 + Br- Reaction , 1994 .

[24]  Amy S. Mullin,et al.  Gas-phase SN2 and E2 reactions of alkyl halides , 1990 .

[25]  D. Truhlar,et al.  A Six-Body Potential Energy Surface for the SN2 Reaction ClN-(g) + CH3Cl(g) and a Variational Transition-State-Theory Calculation of the Rate Constant , 1990 .

[26]  R. Levine,et al.  Molecular Reaction Dynamics and Chemical Reactivity , 1987 .

[27]  R. Jaffe,et al.  Variational theory of reaction rates: Application to F+H2⇄HF+H , 1973 .

[28]  Frank Jensen,et al.  A theoretical study of steric effects in SN2 reactions , 1992 .

[29]  Donald G. Truhlar,et al.  Criterion of minimum state density in the transition state theory of bimolecular reactions , 1979 .

[30]  Gillian C. Lynch,et al.  Converged three‐dimensional quantum mechanical reaction probabilities for the F+H2 reaction on a potential energy surface with realistic entrance and exit channels and comparisons to results for three other surfaces , 1991 .

[31]  D. Truhlar,et al.  Temperature dependence of the kinetic isotope effect for a gas-phase SN2 reaction: Cl- + CH3Br , 1991 .

[32]  W. Miller,et al.  Theories of intramolecular vibrational energy transfer , 1991 .

[33]  Charles A. Lieder,et al.  Gas-phase nucleophilic displacement reactions , 1974 .

[34]  W. Hase,et al.  A direct mechanism for SN2 nucleophilic substitution enhanced by mode selective vibrational excitation , 1989 .

[35]  S. Bauer How energy accumulation and disposal affect the rates of reactions , 1978 .

[36]  Joseph Nagyvary,et al.  The Chemistry of a Stradivarius , 1988 .

[37]  R. Vetter,et al.  Theoretical study of potential wells and barriers for SN2 rearrangement in the systems (XCH3X)- with X = F, Cl, and Br , 1990 .

[38]  J. I. Brauman,et al.  The SN2 Identity Exchange Reaction 37Cl- + 35ClCH2CN .fwdarw. 35Cl- + 37ClCH2CN: Kinetic Energy and Temperature Dependence , 1994 .

[39]  C. Klots Kinetic energy distributions from unimolecular decay: predictions of the Langevin model , 1976 .

[40]  R. J. Boyd,et al.  An ab initio study of model SN2 reactions with inclusion of electron correlation effects through second-order Moeller-Plesset perturbation calculations. , 1990 .

[41]  M. Bowers,et al.  Collisions in a noncentral field: A variational and trajectory investigation of ion–dipole capture , 1980 .

[42]  D. L. Bunker,et al.  Monte Carlo Calculations. VI. A Re‐evaluation of the RRKM Theory of Unimolecular Reaction Rates , 1968 .

[43]  W. Hase,et al.  Trajectory studies of SN2 nucleophilic substitution. III. Dynamical stereochemistry and energy transfer pathways for the Cl−+CH3Cl association and direct substitution reactions , 1993 .

[44]  Stephan E. Barlow,et al.  The gas-phase displacement reaction of chloride ion with methyl chloride as a function of kinetic energy , 1988 .

[45]  Timothy A. Su,et al.  Parametrization of the ion–polar molecule collision rate constant by trajectory calculations , 1982 .

[46]  W. D. Allen,et al.  The SN2 identity exchange reaction ClCH2CN + Cl- .fwdarw. Cl- + ClCH2CN: experiment and theory , 1992 .

[47]  W. Hase,et al.  Trajectory studies of SN2 nucleophilic substitution. II. Nonstatistical central barrier recrossing in the Cl−+CH3Cl system , 1992 .

[48]  C. Ritchie,et al.  ab initio LCGO-MO-SCF calculation of the potential energy surface for an SN2 reaction , 1970 .

[49]  R. Miller The Vibrational Spectroscopy and Dynamics of Weakly Bound Neutral Complexes , 1988, Science.

[50]  William H. Miller,et al.  Full‐dimensional quantum mechanical calculation of the rate constant for the H2+OH→H2O+H reaction , 1993 .

[51]  Mark J. Pellerite,et al.  Intrinsic barriers in nucleophilic displacements. A general model for intrinsic nucleophilicity toward methyl centers , 1983 .

[52]  Don L. Bunker,et al.  Computer Experiments in Chemistry , 1964 .

[53]  A. Veillard,et al.  AB initio calculation of activation energy for an SN2 reaction , 1970 .

[54]  M. Basilevsky,et al.  Dynamical interpretation of the low efficiency of gas-phase nucleophilic substitution reactions (SN2) , 1986 .

[55]  H. Schlegel,et al.  Theoretical studies of SN2 transition states. 1. Geometries , 1981 .

[56]  M. Bowers,et al.  Statistical phase space theory of polyatomic systems: Rigorous energy and angular momentum conservation in reactions involving symmetric polyatomic species , 1977 .

[57]  D. Cyr,et al.  Collisional activation of captured intermediates in the gas-phase SN2 reaction chloride + bromomethane .fwdarw. bromide + chloromethane , 1991 .

[58]  J. Light,et al.  On Detailed Balancing and Statistical Theories of Chemical Kinetics , 1965 .

[59]  H. Schlegel,et al.  An ab initio investigation into the SN2 reaction: Frontside attack versus backside attack in the reaction of F− with CH3F , 1977 .

[60]  A. Viggiano,et al.  Kinetic energy and temperature dependences for the reactions of fluoride with halogenated methanes: experiment and theory , 1990 .

[61]  Juro Horiuti,et al.  On the Statistical Mechanical Treatment of the Absolute Rate of Chemical Reaction , 1938 .

[62]  J. Polanyi Some Concepts in Reaction Dynamics , 1987, Science.

[63]  Rudolph A. Marcus,et al.  The Kinetics of the Recombination of Methyl Radicals and Iodine Atoms , 1951 .

[64]  J. I. Brauman,et al.  Dynamics of proton transfer involving delocalized negative ions in the gas phase , 1976 .

[65]  R. Marcus Product quantum state distributions in unimolecular reactions involving highly flexible transition states , 1986 .

[66]  S. Chapman,et al.  An exploratory study of reactant vibrational effects in CH3 + H2 and its isotopic variants , 1975 .

[67]  W. Hase,et al.  Non-RRKM kinetics in gas-phase SN2 nucleophilic substitution , 1990 .