Cell-Oriented Modeling of In Vitro Capillary Development

We introduce a Cellular Potts model (a cellular-automaton-based Monte-Carlo model) of in vitro capillary development, or angiogenesis. Our model derives from a recent continuum model, which assumes that vascular endothelial cells chemotactically attract each other. Our discrete model is “cell based.” Modeling the cells individually allows us to assign different physicochemical properties to each cell and to study how these properties affect the vascular pattern. Using the model, we assess the roles of intercellular adhesion, cell shape and chemoattractant saturation in in vitro capillary development. We discuss how our computational model can serve as a tool for experimental biologists to “pre-test” hypotheses and to suggest new experiments.

[1]  J. Glazier,et al.  Model of convergent extension in animal morphogenesis. , 1999, Physical review letters.

[2]  Edward R. Dougherty,et al.  Hands-on Morphological Image Processing , 2003 .

[3]  P. Hogeweg,et al.  How amoeboids self-organize into a fruiting body: Multicellular coordination in Dictyostelium discoideum , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[4]  J. Murray,et al.  A mechanical model for the formation of vascular networks in vitro , 1996, Acta biotheoretica.

[5]  M. Goligorsky,et al.  Delayed branching of endothelial capillary-like cords in glycated collagen I is mediated by early induction of PAI-1. , 2001, American journal of physiology. Renal physiology.

[6]  Manuel A. González,et al.  Inhibition of programmed cell death impairs in vitro vascular‐like structure formation and reduces in vivo angiogenesis , 2002, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[7]  P. Hogeweg,et al.  Modelling Morphogenesis: From Single Cells to Crawling Slugs. , 1997, Journal of theoretical biology.

[8]  Christopher J Drake,et al.  Patterning of embryonic blood vessels , 2003, Developmental dynamics : an official publication of the American Association of Anatomists.

[9]  J. Sherratt,et al.  Intercellular adhesion and cancer invasion: a discrete simulation using the extended Potts model. , 2002, Journal of theoretical biology.

[10]  Glazier,et al.  Simulation of the differential adhesion driven rearrangement of biological cells. , 1993, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.

[11]  L Preziosi,et al.  Percolation, morphogenesis, and burgers dynamics in blood vessels formation. , 2003, Physical review letters.

[12]  P. Hogeweg,et al.  Evolving mechanisms of morphogenesis: on the interplay between differential adhesion and cell differentiation. , 2000, Journal of theoretical biology.

[13]  Jesús A. Izaguirre,et al.  COMPUCELL, a multi-model framework for simulation of morphogenesis , 2004, Bioinform..

[14]  Masaru Tomita,et al.  E-Cell 2: Multi-platform E-Cell simulation system , 2003, Bioinform..

[15]  Y Jiang,et al.  Hysteresis and avalanches in two-dimensional foam rheology simulations. , 1999, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.

[16]  Jacques Ohayon,et al.  Critical conditions for pattern formation and in vitro tubulogenesis driven by cellular traction fields. , 2004, Journal of theoretical biology.

[17]  L. Preziosi,et al.  Modeling the early stages of vascular network assembly , 2003, The EMBO journal.

[18]  James A Glazier,et al.  Simulating convergent extension by way of anisotropic differential adhesion. , 2003, Journal of theoretical biology.

[19]  James A Glazier,et al.  Interplay between activator-inhibitor coupling and cell-matrix adhesion in a cellular automaton model for chondrogenic patterning. , 2004, Developmental biology.

[20]  D. Manoussaki A mechanochemical model of angiogenesis and vasculogenesis , 2003 .