Heavy Ion-Induced DNA Double-Strand Breaks in Yeast

Abstract Kiefer, J., Egenolf, R. and Ikpeme, S. Heavy Ion-Induced DNA Double-Strand Breaks in Yeast. Radiat. Res. 157, 141–148 (2002). Induction of DSBs in the diploid yeast, Saccharomyces cerevisiae, was measured by pulsed-field gel electrophoresis (PFGE) after the cells had been exposed on membrane filters to a variety of energetic heavy ions with values of linear energy transfer (LET) ranging from about 2 to 11,500 keV/μm, 241Am α particles, and 80 keV X rays. After irradiation, the cells were lysed, and the chromosomes were separated by PFGE. The gels were stained with ethidium bromide, placed on a UV transilluminator, and analyzed using a computer-coupled camera. The fluorescence intensities of the larger bands were found to decrease exponentially with dose or particle fluence. The slope of this line corresponds to the cross section for at least one double-strand break (DSB), but closely spaced multiple breaks cannot be discriminated. Based on the known size of the native DNA molecules, breakage cross sections per base pair were calculated. They increased with LET until they reached a transient plateau value of about 6 × 10–7 μm2 at about 300–2000 keV/μm; they then rose for the higher LETs, probably reflecting the influence of δ electrons. The relative biological effectiveness for DNA breakage displays a maximum of about 2.5 around 100–200 keV/μm and falls below unity for LET values above 103 keV/μm. For these yeast cells, comparison of the derived breakage cross sections with the corresponding cross section for inactivation derived from the terminal slope of the survival curves shows a strong linear relationship between these cross sections, extending over several orders of magnitude.

[1]  P. B. Price,et al.  SOLID-STATE TRACK DETECTORS: APPLICATIONS TO NUCLEAR SCIENCE AND GEOPHYSICS , 1965 .

[2]  H. J. Brede,et al.  Induction of DNA double-strand breaks by 1H and 4He lons in primary human skin fibroblasts in the LET range of 8 to 124 keV/microm. , 1999, Radiation research.

[3]  M. Brendel,et al.  Isolation and Characterization of Mutants of Saccharomyces cerevisiae Auxotrophic and Conditionally Auxotrophic for 5′ -dTMP , 1974, Zeitschrift fur Naturforschung. Section C, Biosciences.

[4]  T. Jung,et al.  Damage pattern as a function of radiation quality and other factors. , 1999, Comptes rendus de l'Academie des sciences. Serie III, Sciences de la vie.

[5]  J. Kiefer,et al.  Mutations in Mammalian Cells Induced by Heavy Charged Particles: An Indicator for Risk Assessment in Space , 2001, Radiation research.

[6]  M. Löbrich,et al.  No dose-dependence of DNA double-strand break misrejoining following α-particle irradiation , 2000 .

[7]  T. Mulvey A closer look , 2007, Nature.

[8]  G. Barendsen RBE-LET relationships for different types of lethal radiation damage in mammalian cells: comparison with DNA dsb and an interpretation of differences in radiosensitivity. , 1994, International journal of radiation biology.

[9]  I. Sair Chromatin Conformation in Living Cells: Support for a Zig-Zag Model of the 30 nm Chromatin Fiber , 1998 .

[10]  M. Löbrich,et al.  Analysis of the inversion effect in pulsed field gel electrophoresis by a two-dimensional contour-clamped homogeneous electric field system. , 1993, Analytical biochemistry.

[11]  K. Prise,et al.  DNA double-strand break distributions in X-ray and alpha-particle irradiated V79 cells: evidence for non-random breakage. , 1997, International journal of radiation biology.

[12]  J. Pérez-Ortín,et al.  News & Notes: Stochastic Nucleosome Positioning in a Yeast Chromatin Region Is Not Dependent on Histone H1 , 1999, Current Microbiology.

[13]  J. Kiefer,et al.  A model of ion track structure based on classical collision dynamics. , 1986, Physics in medicine and biology.

[14]  D. Blöcher DNA double-strand break repair determines the RBE of alpha-particles. , 1988, International journal of radiation biology.

[15]  George Lliakis,et al.  The role of DNA double strand breaks in lonizing radiation‐induced killing of eukaryotic cells , 1991 .

[16]  P. Karran,et al.  DNA double strand break repair in mammalian cells. , 2000, Current opinion in genetics & development.

[17]  H. Bernstein,et al.  Bile Salt Activation of Stress Response Promoters in Escherichia coli , 1999, Current Microbiology.

[18]  D T Goodhead,et al.  Initial events in the cellular effects of ionizing radiations: clustered damage in DNA. , 1994, International journal of radiation biology.

[19]  J. Ward,et al.  The complexity of DNA damage: relevance to biological consequences. , 1994, International journal of radiation biology.

[20]  K M Prise,et al.  A review of dsb induction data for varying quality radiations. , 1998, International journal of radiation biology.

[21]  J. Kiefer,et al.  Heavy ion-induced DNA double-strand breaks in yeast. , 1992, International journal of radiation biology.

[22]  M. Frankenberg-Schwager,et al.  Evidence for DNA double-strand breaks as the critical lesions in yeast cells irradiated with sparsely or densely ionizing radiation under oxic or anoxic conditions. , 1981, Radiation research.

[23]  P. Pfeiffer The mutagenic potential of DNA double-strand break repair. , 1998, Toxicology letters.

[24]  C Johannes,et al.  DNA double-strand breaks induced by sparsely ionizing radiation and endonucleases as critical lesions for cell death, chromosomal aberrations, mutations and oncogenic transformation. , 1992, Mutagenesis.

[25]  J. Ward Radiation mutagenesis: the initial DNA lesions responsible. , 1995, Radiation research.

[26]  M. Löbrich,et al.  Non-random distribution of DNA double-strand breaks induced by particle irradiation. , 1996, International journal of radiation biology.

[27]  M. Lieber Pathological and Physiological Double-Strand Breaks: Roles in Cancer, Aging, and the Immune System , 1998 .

[28]  G. Iliakis,et al.  The role of DNA double strand breaks in ionizing radiation-induced killing of eukaryotic cells. , 1991, BioEssays : news and reviews in molecular, cellular and developmental biology.

[29]  M. Löbrich,et al.  Joining of correct and incorrect DNA ends at double-strand breaks produced by high-linear energy transfer radiation in human fibroblasts. , 1998, Radiation research.

[30]  J. Lett,et al.  Damage to cellular DNA from particulate radiations, the efficacy of its processing and the radiosensitivity of mammalian cells , 1992, Radiation and environmental biophysics.

[31]  V. Pedraza,et al.  Relationship between DNA damage, rejoining and cell killing by radiation in mammalian cells. , 1996, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[32]  M. Löbrich,et al.  No dose-dependence of DNA double-strand break misrejoining following alpha-particle irradiation. , 2000, International journal of radiation biology.

[33]  M. Löbrich,et al.  Heavy ion-induced DNA double-strand breaks with yeast as a model system , 1995, Radiation and environmental biophysics.

[34]  M. Löbrich,et al.  DNA double-strand breaks induced by high-energy neon and iron ions in human fibroblasts. II. Probing individual notI fragments by hybridization. , 1994, Radiation research.

[35]  R. Katz,et al.  Theory of RBE for heavy ion bombardment of dry enzymes and viruses. , 1967, Radiation research.

[36]  C. Arlett,et al.  Radiation-induced DNA double-strand breaks and the radiosensitivity of human cells: a closer look. , 1997, Biochimie.

[37]  B. Stenerlöw,et al.  Rejoining of DNA fragments produced by radiations of different linear energy transfer. , 2000, International journal of radiation biology.

[38]  P. Olive,et al.  The role of DNA single- and double-strand breaks in cell killing by ionizing radiation. , 1998, Radiation research.

[39]  M. Frankenberg-Schwager,et al.  DNA double-strand breaks: their repair and relationship to cell killing in yeast. , 1990, International journal of radiation biology.

[40]  B. Barrell,et al.  Life with 6000 Genes , 1996, Science.

[41]  J. Kiefer Cellular and subcellular effects of very heavy ions. , 1985, International journal of radiation biology and related studies in physics, chemistry, and medicine.

[42]  U. Hagen Mechanisms of induction and repair of DNA double-strand breaks by ionizing radiation: Some contradictions , 1994, Radiation and environmental biophysics.