A novel dynamics combination model reveals the hidden information of community structure

The analysis of the dynamic details of community structure is an important question for scientists from many fields. In this paper, we propose a novel Markov–Potts framework to uncover the optimal community structures and their stabilities across multiple timescales. Specifically, we model the Potts dynamics to detect community structure by a Markov process, which has a clear mathematical explanation. Then the local uniform behavior of spin values revealed by our model is shown that can naturally reveal the stability of hierarchical community structure across multiple timescales. To prove the validity, phase transition of stochastic dynamic system is used to indicate that the stability of community structure we proposed is able to describe the significance of community structure based on eigengap theory. Finally, we test our framework on some example networks and find it does not have resolute limitation problem at all. Results have shown the model we proposed is able to uncover hierarchical structure in different scales effectively and efficiently.

[1]  Stefan Bornholdt,et al.  Detecting fuzzy community structures in complex networks with a Potts model. , 2004, Physical review letters.

[2]  M. Newman,et al.  Finding community structure in networks using the eigenvectors of matrices. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.

[3]  Luonan Chen,et al.  Quantitative function for community detection. , 2008 .

[4]  R. Swendsen,et al.  Cluster Monte Carlo algorithms , 1990 .

[5]  Jitendra Malik,et al.  Normalized Cuts and Image Segmentation , 2000, IEEE Trans. Pattern Anal. Mach. Intell..

[6]  G. Caldarelli,et al.  Detecting communities in large networks , 2004, cond-mat/0402499.

[7]  Blatt,et al.  Superparamagnetic clustering of data. , 1998, Physical review letters.

[8]  Alex Arenas,et al.  Synchronization reveals topological scales in complex networks. , 2006, Physical review letters.

[9]  M. Small,et al.  Seeding the Kernels in graphs: toward multi-resolution community analysis , 2009 .

[10]  Jianbo Shi,et al.  Segmentation given partial grouping constraints , 2004, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[11]  Xiang-Sun Zhang,et al.  Modularity optimization in community detection of complex networks , 2009 .

[12]  M E J Newman,et al.  Finding and evaluating community structure in networks. , 2003, Physical review. E, Statistical, nonlinear, and soft matter physics.

[13]  T. Vicsek,et al.  Uncovering the overlapping community structure of complex networks in nature and society , 2005, Nature.

[14]  M. Fiedler Algebraic connectivity of graphs , 1973 .

[15]  Yong Wang,et al.  Community structure detection based on Potts model and network's spectral characterization , 2012 .

[16]  David Botstein,et al.  GO: : TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes , 2004, Bioinform..

[17]  S. Havlin,et al.  Self-similarity of complex networks , 2005, Nature.

[18]  Eytan Domany,et al.  Superparamagnetic Clustering of Data , 1996 .

[19]  S. Fortunato,et al.  Resolution limit in community detection , 2006, Proceedings of the National Academy of Sciences.

[20]  Tiejun Li,et al.  Optimal partition and effective dynamics of complex networks , 2008, Proceedings of the National Academy of Sciences.

[21]  E. Domany,et al.  Potts ferromagnets on coexpressed gene networks: identifying maximally stable partitions. , 2003, Physical review letters.

[22]  Jean-Charles Delvenne,et al.  Stability of graph communities across time scales , 2008, Proceedings of the National Academy of Sciences.

[23]  M E J Newman,et al.  Fast algorithm for detecting community structure in networks. , 2003, Physical review. E, Statistical, nonlinear, and soft matter physics.

[24]  Alex Arenas,et al.  Analysis of the structure of complex networks at different resolution levels , 2007, physics/0703218.

[25]  A. Lesne,et al.  Spectral signatures of hierarchical relaxation , 1999 .

[26]  M E J Newman,et al.  Modularity and community structure in networks. , 2006, Proceedings of the National Academy of Sciences of the United States of America.